RNA–Protein interactions for RNA: ENST00000542416.1

UBC-211, Transcript of ubiquitin C, humanhuman

TSL 4

Gene UBC, Length 517 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-211ENST00000542416 NFIXQ14938 502 aa12.17□□□□□ -0.46
UBC-211ENST00000542416 COL13A1Q5TAT6 717 aaPredicted RBP12.17□□□□□ -0.46
UBC-211ENST00000542416 TNS4Q8IZW8 715 aa12.17□□□□□ -0.46
UBC-211ENST00000542416 KIAA1551Q9HCM1 1747 aa12.17□□□□□ -0.46
UBC-211ENST00000542416 N4BP2Q86UW6 1770 aaPredicted RBP12.16□□□□□ -0.46
UBC-211ENST00000542416 A0A087WZG4 1122 aa12.16□□□□□ -0.46
UBC-211ENST00000542416 STARD3NLO95772 234 aa12.16□□□□□ -0.46
UBC-211ENST00000542416 SERPINB2P05120 415 aa12.16□□□□□ -0.46
UBC-211ENST00000542416 RNMTO43148 476 aaKnown RBP12.15□□□□□ -0.46
UBC-211ENST00000542416 C2CD5Q86YS7 1000 aa12.15□□□□□ -0.46
UBC-211ENST00000542416 COL15A1P39059 1388 aa12.15□□□□□ -0.46
UBC-211ENST00000542416 PDE6BP35913 854 aa12.14□□□□□ -0.47
UBC-211ENST00000542416 RASSF7Q02833 373 aa12.14□□□□□ -0.47
UBC-211ENST00000542416 TEX13AQ9BXU3 409 aaPredicted RBP12.14□□□□□ -0.47
UBC-211ENST00000542416 LGR6Q9HBX8 967 aa12.14□□□□□ -0.47
UBC-211ENST00000542416 COL5A3P25940 1745 aaPredicted RBP12.14□□□□□ -0.47
UBC-211ENST00000542416 HSPA5P11021 654 aaKnown RBP12.13□□□□□ -0.47
UBC-211ENST00000542416 PRELPP51888 382 aa12.13□□□□□ -0.47
UBC-211ENST00000542416 SLC39A6Q13433 755 aa12.13□□□□□ -0.47
UBC-211ENST00000542416 NPM2Q86SE8 214 aaKnown RBP12.13□□□□□ -0.47
UBC-211ENST00000542416 TTC5Q8N0Z6 440 aa12.13□□□□□ -0.47
UBC-211ENST00000542416 ZBTB1Q9Y2K1 713 aa12.13□□□□□ -0.47
UBC-211ENST00000542416 ARFGEF1Q9Y6D6 1849 aa12.12□□□□□ -0.47
UBC-211ENST00000542416 BRIP1Q9BX63 1249 aa12.12□□□□□ -0.47
UBC-211ENST00000542416 MYH14Q7Z406 1995 aaKnown RBP12.12□□□□□ -0.47
UBC-211ENST00000542416 WDR90Q96KV7 1748 aa12.11□□□□□ -0.47
UBC-211ENST00000542416 CANXP27824 592 aaKnown RBP12.11□□□□□ -0.47
UBC-211ENST00000542416 EIF5P55010 431 aaKnown RBP12.11□□□□□ -0.47
UBC-211ENST00000542416 ERFEQ4G0M1 354 aa12.11□□□□□ -0.47
UBC-211ENST00000542416 SOGA3Q5TF21 947 aa12.11□□□□□ -0.47
UBC-211ENST00000542416 ZNF622Q969S3 477 aaKnown RBP eCLIP12.11□□□□□ -0.472e-36■□□□□ 10.7
UBC-211ENST00000542416 BCL2L12Q9HB09 334 aa12.11□□□□□ -0.47
UBC-211ENST00000542416 BRCA1P38398 1863 aaKnown RBP12.1□□□□□ -0.47
UBC-211ENST00000542416 NFKBIEO00221 500 aa12.1□□□□□ -0.47
UBC-211ENST00000542416 HSPA1AP0DMV8 641 aaKnown RBP12.1□□□□□ -0.47
UBC-211ENST00000542416 HSPA1BP0DMV9 641 aaKnown RBP12.1□□□□□ -0.47
UBC-211ENST00000542416 BICDL1Q6ZP65 573 aa12.1□□□□□ -0.47
UBC-211ENST00000542416 LTBP3Q9NS15 1303 aa12.1□□□□□ -0.47
UBC-211ENST00000542416 NPHP1O15259 732 aa12.09□□□□□ -0.47
UBC-211ENST00000542416 DIAPH1O60610 1272 aaKnown RBP12.09□□□□□ -0.47
UBC-211ENST00000542416 CAPN15O75808 1086 aa12.09□□□□□ -0.47
UBC-211ENST00000542416 HMOX1P09601 288 aa12.09□□□□□ -0.47
UBC-211ENST00000542416 TEFQ10587 303 aa12.09□□□□□ -0.47
UBC-211ENST00000542416 MTHFSDQ2M296 383 aaKnown RBP12.09□□□□□ -0.47
UBC-211ENST00000542416 AMER1Q5JTC6 1135 aaPredicted RBP12.09□□□□□ -0.47
UBC-211ENST00000542416 CNKSR1Q969H4 720 aa12.09□□□□□ -0.47
UBC-211ENST00000542416 CREBZFQ9NS37 354 aa12.09□□□□□ -0.47
UBC-211ENST00000542416 TNRC6CQ9HCJ0 1690 aaKnown RBP12.09□□□□□ -0.47
UBC-211ENST00000542416 MRC1P22897 1456 aa12.08□□□□□ -0.47
UBC-211ENST00000542416 CARMIL3Q8ND23 1372 aa12.08□□□□□ -0.48
UBC-211ENST00000542416 IL6STP40189 918 aaPredicted RBP12.08□□□□□ -0.48
UBC-211ENST00000542416 CHADLQ6NUI6 762 aa12.08□□□□□ -0.48
UBC-211ENST00000542416 GAS2L2Q8NHY3 880 aa12.08□□□□□ -0.48
UBC-211ENST00000542416 SETDB2Q96T68 719 aa12.08□□□□□ -0.48
UBC-211ENST00000542416 TAOK3Q9H2K8 898 aa12.08□□□□□ -0.48
UBC-211ENST00000542416 IQCA1LA6NCM1 817 aa12.07□□□□□ -0.48
UBC-211ENST00000542416 POTECB2RU33 542 aa12.07□□□□□ -0.48
UBC-211ENST00000542416 C21orf2O43822 256 aa12.07□□□□□ -0.48
UBC-211ENST00000542416 ST5P78524 1137 aa12.07□□□□□ -0.48
UBC-211ENST00000542416 TBC1D9BQ66K14 1250 aa12.07□□□□□ -0.48
UBC-211ENST00000542416 STYK1Q6J9G0 422 aa12.07□□□□□ -0.48
UBC-211ENST00000542416 ZNF790Q6PG37 636 aa12.07□□□□□ -0.48
UBC-211ENST00000542416 GNAT3A8MTJ3 354 aa12.06□□□□□ -0.48
UBC-211ENST00000542416 PRR5LQ6MZQ0 368 aa12.06□□□□□ -0.48
UBC-211ENST00000542416 CNBD1Q8NA66 436 aa12.06□□□□□ -0.48
UBC-211ENST00000542416 ZNF496Q96IT1 587 aaPredicted RBP12.06□□□□□ -0.48
UBC-211ENST00000542416 FMNL2Q96PY5 1086 aa12.06□□□□□ -0.48
UBC-211ENST00000542416 ZNF330Q9Y3S2 320 aaPredicted RBP12.06□□□□□ -0.48
UBC-211ENST00000542416 PCNTO95613 3336 aa12.06□□□□□ -0.48
UBC-211ENST00000542416 TJP1Q07157 1748 aa12.06□□□□□ -0.48
UBC-211ENST00000542416 HEG1Q9ULI3 1381 aa12.05□□□□□ -0.48
UBC-211ENST00000542416 MASTLQ96GX5 879 aa12.05□□□□□ -0.48
UBC-211ENST00000542416 PCGF6Q9BYE7 350 aa12.05□□□□□ -0.48
UBC-211ENST00000542416 TBC1D2BQ9UPU7 963 aa12.05□□□□□ -0.48
UBC-211ENST00000542416 ADAMTS7Q9UKP4 1686 aa12.04□□□□□ -0.48
UBC-211ENST00000542416 SRGNP10124 158 aa12.04□□□□□ -0.48
UBC-211ENST00000542416 CLEC4GQ6UXB4 293 aa12.04□□□□□ -0.48
UBC-211ENST00000542416 LDHDQ86WU2 507 aa12.04□□□□□ -0.48
UBC-211ENST00000542416 ZNF219Q9P2Y4 722 aaPredicted RBP12.04□□□□□ -0.48
UBC-211ENST00000542416 NRXN2Q9P2S2 1712 aa12.03□□□□□ -0.48
UBC-211ENST00000542416 DDNO94850 711 aaPredicted RBP12.03□□□□□ -0.48
UBC-211ENST00000542416 PRPF40BQ6NWY9 871 aaKnown RBP12.03□□□□□ -0.48
UBC-211ENST00000542416 IL17REQ8NFR9 667 aa12.03□□□□□ -0.48
UBC-211ENST00000542416 L3MBTL3Q96JM7 780 aaPredicted RBP12.03□□□□□ -0.48
UBC-211ENST00000542416 ZNF652Q9Y2D9 606 aa12.03□□□□□ -0.48
UBC-211ENST00000542416 SCN11AQ9UI33 1791 aa12.02□□□□□ -0.48
UBC-211ENST00000542416 SBF1O95248 1867 aa12.02□□□□□ -0.48
UBC-211ENST00000542416 U2SURPO15042 1029 aaKnown RBP12.02□□□□□ -0.49
UBC-211ENST00000542416 RGL2O15211 777 aa12.02□□□□□ -0.49
UBC-211ENST00000542416 CAMTA2O94983 1202 aa12.02□□□□□ -0.49
UBC-211ENST00000542416 CCDC93Q567U6 631 aa12.02□□□□□ -0.49
UBC-211ENST00000542416 DZIP3Q86Y13 1208 aaKnown RBP12.02□□□□□ -0.49
UBC-211ENST00000542416 AIDAQ96BJ3 306 aa12.02□□□□□ -0.49
UBC-211ENST00000542416 PRDM10Q9NQV6 1147 aa12.02□□□□□ -0.49
UBC-211ENST00000542416 MKRN1Q9UHC7 482 aaKnown RBP12.02□□□□□ -0.49
UBC-211ENST00000542416 BTBD11A6QL63 1104 aa12.01□□□□□ -0.49
UBC-211ENST00000542416 A1BGP04217 495 aa12.01□□□□□ -0.49
UBC-211ENST00000542416 NPR1P16066 1061 aa12.01□□□□□ -0.49
UBC-211ENST00000542416 TPTE2Q6XPS3 522 aa12.01□□□□□ -0.49
UBC-211ENST00000542416 NBPF5PQ86XG9 351 aaPredicted RBP12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms