RNA–Protein interactions for RNA: ENST00000542108.1

KNOP1P1-201, Transcript of lysine rich nucleolar protein 1 pseudogene 1, humanhuman

BASIC

Gene KNOP1P1, Length 989 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNOP1P1-201ENST00000542108 PPP2R1AP30153 589 aa17.73■□□□□ 0.43
KNOP1P1-201ENST00000542108 TM4SF1P30408 202 aa17.73■□□□□ 0.43
KNOP1P1-201ENST00000542108 PRKAR2BP31323 418 aa17.73■□□□□ 0.43
KNOP1P1-201ENST00000542108 DDR1Q08345 913 aa17.73■□□□□ 0.43
KNOP1P1-201ENST00000542108 USPL1Q5W0Q7 1092 aa17.73■□□□□ 0.43
KNOP1P1-201ENST00000542108 ZNF790Q6PG37 636 aa17.73■□□□□ 0.43
KNOP1P1-201ENST00000542108 TEX13AQ9BXU3 409 aaPredicted RBP17.73■□□□□ 0.43
KNOP1P1-201ENST00000542108 BCS1LQ9Y276 419 aa17.73■□□□□ 0.43
KNOP1P1-201ENST00000542108 ZBTB1Q9Y2K1 713 aa17.73■□□□□ 0.43
KNOP1P1-201ENST00000542108 HEG1Q9ULI3 1381 aa17.72■□□□□ 0.43
KNOP1P1-201ENST00000542108 POLRMTO00411 1230 aaKnown RBP17.72■□□□□ 0.43
KNOP1P1-201ENST00000542108 SENP3-EIF4A1A0A087X0R7 540 aa17.71■□□□□ 0.43
KNOP1P1-201ENST00000542108 ARFGEF1Q9Y6D6 1849 aa17.7■□□□□ 0.42
KNOP1P1-201ENST00000542108 A0A087WZG4 1122 aa17.7■□□□□ 0.42
KNOP1P1-201ENST00000542108 FCHSD2O94868 740 aa17.7■□□□□ 0.42
KNOP1P1-201ENST00000542108 KCNA3P22001 575 aa17.7■□□□□ 0.42
KNOP1P1-201ENST00000542108 ZNF496Q96IT1 587 aaPredicted RBP17.7■□□□□ 0.42
KNOP1P1-201ENST00000542108 PHACTR3Q96KR7 559 aa17.7■□□□□ 0.42
KNOP1P1-201ENST00000542108 PIM2Q9P1W9 311 aa17.7■□□□□ 0.42
KNOP1P1-201ENST00000542108 U2AF1L5P0DN76 240 aaPredicted RBP17.69■□□□□ 0.42
KNOP1P1-201ENST00000542108 EIF5P55010 431 aaKnown RBP17.69■□□□□ 0.42
KNOP1P1-201ENST00000542108 U2AF1Q01081 240 aaKnown RBP eCLIP17.69■□□□□ 0.42
KNOP1P1-201ENST00000542108 FMNL2Q96PY5 1086 aa17.69■□□□□ 0.42
KNOP1P1-201ENST00000542108 NRXN2Q9P2S2 1712 aa17.69■□□□□ 0.42
KNOP1P1-201ENST00000542108 CANXP27824 592 aaKnown RBP17.68■□□□□ 0.42
KNOP1P1-201ENST00000542108 NFIXQ14938 502 aa17.68■□□□□ 0.42
KNOP1P1-201ENST00000542108 DALRD3Q5D0E6 543 aaKnown RBP17.68■□□□□ 0.42
KNOP1P1-201ENST00000542108 ARHGAP27Q6ZUM4 889 aa17.67■□□□□ 0.42
KNOP1P1-201ENST00000542108 BTBD11A6QL63 1104 aa17.66■□□□□ 0.42
KNOP1P1-201ENST00000542108 HTATSF1O43719 755 aaKnown RBP17.66■□□□□ 0.42
KNOP1P1-201ENST00000542108 IL6STP40189 918 aaPredicted RBP17.66■□□□□ 0.42
KNOP1P1-201ENST00000542108 RTF1Q92541 710 aaKnown RBP17.66■□□□□ 0.42
KNOP1P1-201ENST00000542108 BCL2L12Q9HB09 334 aa17.66■□□□□ 0.42
KNOP1P1-201ENST00000542108 AFDNP55196 1824 aaKnown RBP17.65■□□□□ 0.42
KNOP1P1-201ENST00000542108 SCN7AQ01118 1682 aa17.65■□□□□ 0.42
KNOP1P1-201ENST00000542108 ZNF526Q8TF50 670 aaPredicted RBP17.65■□□□□ 0.42
KNOP1P1-201ENST00000542108 SERPINB2P05120 415 aa17.64■□□□□ 0.41
KNOP1P1-201ENST00000542108 NPM2Q86SE8 214 aaKnown RBP17.64■□□□□ 0.41
KNOP1P1-201ENST00000542108 CHRNA5P30532 468 aa17.63■□□□□ 0.41
KNOP1P1-201ENST00000542108 DLEC1Q9Y238 1755 aa17.62■□□□□ 0.41
KNOP1P1-201ENST00000542108 NEFMP07197 916 aa17.62■□□□□ 0.41
KNOP1P1-201ENST00000542108 PDZRN3Q9UPQ7 1066 aa17.61■□□□□ 0.41
KNOP1P1-201ENST00000542108 CEP350Q5VT06 3117 aa17.61■□□□□ 0.41
KNOP1P1-201ENST00000542108 CARMIL3Q8ND23 1372 aa17.61■□□□□ 0.41
KNOP1P1-201ENST00000542108 KIF3CO14782 793 aa17.6■□□□□ 0.41
KNOP1P1-201ENST00000542108 SNRPA1P09661 255 aaKnown RBP17.6■□□□□ 0.41
KNOP1P1-201ENST00000542108 C9orf131Q5VYM1 1079 aa17.6■□□□□ 0.41
KNOP1P1-201ENST00000542108 MCM10Q7L590 875 aa17.6■□□□□ 0.41
KNOP1P1-201ENST00000542108 ZNF330Q9Y3S2 320 aaPredicted RBP17.6■□□□□ 0.41
KNOP1P1-201ENST00000542108 KCNQ3O43525 872 aa17.59■□□□□ 0.41
KNOP1P1-201ENST00000542108 A1BGP04217 495 aa17.59■□□□□ 0.41
KNOP1P1-201ENST00000542108 TBC1D9BQ66K14 1250 aa17.59■□□□□ 0.41
KNOP1P1-201ENST00000542108 TBC1D2BQ9UPU7 963 aa17.59■□□□□ 0.41
KNOP1P1-201ENST00000542108 BCORQ6W2J9 1755 aa17.58■□□□□ 0.41
KNOP1P1-201ENST00000542108 H0YIN7 160 aa17.58■□□□□ 0.4
KNOP1P1-201ENST00000542108 BICDL1Q6ZP65 573 aa17.58■□□□□ 0.4
KNOP1P1-201ENST00000542108 TTLL6Q8N841 843 aa17.58■□□□□ 0.4
KNOP1P1-201ENST00000542108 PNNQ9H307 717 aaKnown RBP17.58■□□□□ 0.4
KNOP1P1-201ENST00000542108 ZC3H4Q9UPT8 1303 aaKnown RBP17.57■□□□□ 0.4
KNOP1P1-201ENST00000542108 RGL2O15211 777 aa17.57■□□□□ 0.4
KNOP1P1-201ENST00000542108 CAMTA2O94983 1202 aa17.57■□□□□ 0.4
KNOP1P1-201ENST00000542108 TAF7Q15545 349 aaPredicted RBP17.57■□□□□ 0.4
KNOP1P1-201ENST00000542108 C2CD5Q86YS7 1000 aa17.57■□□□□ 0.4
KNOP1P1-201ENST00000542108 BRIP1Q9BX63 1249 aa17.57■□□□□ 0.4
KNOP1P1-201ENST00000542108 HSPA6P17066 643 aa17.56■□□□□ 0.4
KNOP1P1-201ENST00000542108 PDE6BP35913 854 aa17.56■□□□□ 0.4
KNOP1P1-201ENST00000542108 CLEC4GQ6UXB4 293 aa17.56■□□□□ 0.4
KNOP1P1-201ENST00000542108 DZIP3Q86Y13 1208 aaKnown RBP17.56■□□□□ 0.4
KNOP1P1-201ENST00000542108 PNISRQ8TF01 805 aaKnown RBP17.56■□□□□ 0.4
KNOP1P1-201ENST00000542108 SETDB2Q96T68 719 aa17.56■□□□□ 0.4
KNOP1P1-201ENST00000542108 RNF181Q9P0P0 153 aa17.56■□□□□ 0.4
KNOP1P1-201ENST00000542108 USP16Q9Y5T5 823 aa17.56■□□□□ 0.4
KNOP1P1-201ENST00000542108 KDM2BQ8NHM5 1336 aa17.55■□□□□ 0.4
KNOP1P1-201ENST00000542108 TOMM70O94826 608 aa17.55■□□□□ 0.4
KNOP1P1-201ENST00000542108 DCTN1Q14203 1278 aa17.55■□□□□ 0.4
KNOP1P1-201ENST00000542108 PRR5LQ6MZQ0 368 aa17.55■□□□□ 0.4
KNOP1P1-201ENST00000542108 PLEKHF1Q96S99 279 aa17.55■□□□□ 0.4
KNOP1P1-201ENST00000542108 ZNF652Q9Y2D9 606 aa17.55■□□□□ 0.4
KNOP1P1-201ENST00000542108 SBF1O95248 1867 aa17.54■□□□□ 0.4
KNOP1P1-201ENST00000542108 ANKRD31Q8N7Z5 1873 aa17.54■□□□□ 0.4
KNOP1P1-201ENST00000542108 CNBD1Q8NA66 436 aa17.54■□□□□ 0.4
KNOP1P1-201ENST00000542108 LAMB4A4D0S4 1761 aa17.53■□□□□ 0.4
KNOP1P1-201ENST00000542108 DLG5Q8TDM6 1919 aa17.53■□□□□ 0.4
KNOP1P1-201ENST00000542108 PRAMEF22A3QJZ6 481 aa17.53■□□□□ 0.4
KNOP1P1-201ENST00000542108 ST5P78524 1137 aa17.53■□□□□ 0.4
KNOP1P1-201ENST00000542108 RALBP1Q15311 655 aa17.53■□□□□ 0.4
KNOP1P1-201ENST00000542108 MAPK8IP3Q9UPT6 1336 aa17.52■□□□□ 0.4
KNOP1P1-201ENST00000542108 NPHP1O15259 732 aa17.52■□□□□ 0.4
KNOP1P1-201ENST00000542108 LMNB1P20700 586 aa17.52■□□□□ 0.4
KNOP1P1-201ENST00000542108 NFE2L2Q16236 605 aa17.52■□□□□ 0.4
KNOP1P1-201ENST00000542108 NMRK2Q9NPI5 230 aa17.52■□□□□ 0.4
KNOP1P1-201ENST00000542108 KDM3BQ7LBC6 1761 aa17.52■□□□□ 0.4
KNOP1P1-201ENST00000542108 TNRC6CQ9HCJ0 1690 aaKnown RBP17.51■□□□□ 0.39
KNOP1P1-201ENST00000542108 COL11A2P13942 1736 aaPredicted RBP17.5■□□□□ 0.39
KNOP1P1-201ENST00000542108 RASSF7Q02833 373 aa17.5■□□□□ 0.39
KNOP1P1-201ENST00000542108 NBPF26B4DH59 902 aa17.49■□□□□ 0.39
KNOP1P1-201ENST00000542108 PIP4K2AP48426 406 aaPredicted RBP17.49■□□□□ 0.39
KNOP1P1-201ENST00000542108 STYK1Q6J9G0 422 aa17.49■□□□□ 0.39
KNOP1P1-201ENST00000542108 NBPF10Q6P3W6 841 aaKnown RBP17.49■□□□□ 0.39
KNOP1P1-201ENST00000542108 NBPF5PQ86XG9 351 aaPredicted RBP17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms