RNA–Protein interactions for RNA: ENST00000541963.5

CPSF7-220, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4 BASIC

Gene CPSF7, Length 549 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-220ENST00000541963 CARNS1A5YM72 827 aa8.26□□□□□ -1.09
CPSF7-220ENST00000541963 ZNF697Q5TEC3 545 aa8.26□□□□□ -1.09
CPSF7-220ENST00000541963 SPRYD7Q5W111 196 aa8.26□□□□□ -1.09
CPSF7-220ENST00000541963 CCDC116Q8IYX3 515 aa8.26□□□□□ -1.09
CPSF7-220ENST00000541963 SIX5Q8N196 739 aa8.26□□□□□ -1.09
CPSF7-220ENST00000541963 MRGPRX2Q96LB1 330 aa8.26□□□□□ -1.09
CPSF7-220ENST00000541963 PGPEP1Q9NXJ5 209 aa8.26□□□□□ -1.09
CPSF7-220ENST00000541963 TLL2Q9Y6L7 1015 aa8.26□□□□□ -1.09
CPSF7-220ENST00000541963 WASF2Q9Y6W5 498 aa8.26□□□□□ -1.09
CPSF7-220ENST00000541963 CDC42BPAQ5VT25 1732 aa8.26□□□□□ -1.09
CPSF7-220ENST00000541963 ATP10AO60312 1499 aa8.26□□□□□ -1.09
CPSF7-220ENST00000541963 MAP3K1Q13233 1512 aa8.25□□□□□ -1.09
CPSF7-220ENST00000541963 HNRNPMP52272 730 aaKnown RBP eCLIP8.25□□□□□ -1.09
CPSF7-220ENST00000541963 MYT1Q01538 1121 aa8.25□□□□□ -1.09
CPSF7-220ENST00000541963 FOXC1Q12948 553 aa8.25□□□□□ -1.09
CPSF7-220ENST00000541963 SWI5Q1ZZU3 235 aa8.25□□□□□ -1.09
CPSF7-220ENST00000541963 ZNF598Q86UK7 904 aaKnown RBP8.25□□□□□ -1.09
CPSF7-220ENST00000541963 HINFPQ9BQA5 517 aa8.25□□□□□ -1.09
CPSF7-220ENST00000541963 CCDC9Q9Y3X0 531 aaKnown RBP8.25□□□□□ -1.09
CPSF7-220ENST00000541963 KIAA1107Q9UPP5 1409 aa8.25□□□□□ -1.09
CPSF7-220ENST00000541963 SUPT6HQ7KZ85 1726 aaKnown RBP8.24□□□□□ -1.09
CPSF7-220ENST00000541963 TIAM1Q13009 1591 aa8.24□□□□□ -1.09
CPSF7-220ENST00000541963 ZBTB7BO15156 539 aaPredicted RBP8.24□□□□□ -1.09
CPSF7-220ENST00000541963 SIAH2O43255 324 aa8.24□□□□□ -1.09
CPSF7-220ENST00000541963 GRM5P41594 1212 aa8.24□□□□□ -1.09
CPSF7-220ENST00000541963 CYLDQ9NQC7 956 aa8.24□□□□□ -1.09
CPSF7-220ENST00000541963 PCDHGA11Q9Y5H2 935 aa8.24□□□□□ -1.09
CPSF7-220ENST00000541963 SPAG9O60271 1321 aaKnown RBP8.24□□□□□ -1.09
CPSF7-220ENST00000541963 ARHGEF40Q8TER5 1519 aa8.24□□□□□ -1.09
CPSF7-220ENST00000541963 C9orf84Q5VXU9 1444 aa8.23□□□□□ -1.09
CPSF7-220ENST00000541963 A0A0G2JS52 829 aa8.23□□□□□ -1.09
CPSF7-220ENST00000541963 ALDH1A1P00352 501 aa8.23□□□□□ -1.09
CPSF7-220ENST00000541963 ERVK-9P63128 1117 aa8.23□□□□□ -1.09
CPSF7-220ENST00000541963 MLECQ14165 292 aa8.23□□□□□ -1.09
CPSF7-220ENST00000541963 CCER1Q8TC90 406 aaPredicted RBP8.23□□□□□ -1.09
CPSF7-220ENST00000541963 CLP1Q92989 425 aaKnown RBP8.23□□□□□ -1.09
CPSF7-220ENST00000541963 PRKD2Q9BZL6 878 aa8.23□□□□□ -1.09
CPSF7-220ENST00000541963 GZF1Q9H116 711 aaPredicted RBP8.23□□□□□ -1.09
CPSF7-220ENST00000541963 EMILIN1Q9Y6C2 1016 aa8.23□□□□□ -1.09
CPSF7-220ENST00000541963 V9GY48 417 aaPredicted RBP8.23□□□□□ -1.09
CPSF7-220ENST00000541963 LRRC9Q6ZRR7 1453 aa8.23□□□□□ -1.09
CPSF7-220ENST00000541963 MLH3Q9UHC1 1453 aa8.23□□□□□ -1.09
CPSF7-220ENST00000541963 ITSN2Q9NZM3 1697 aa8.23□□□□□ -1.09
CPSF7-220ENST00000541963 ABCC1P33527 1531 aa8.23□□□□□ -1.09
CPSF7-220ENST00000541963 YEATS2Q9ULM3 1422 aa8.22□□□□□ -1.09
CPSF7-220ENST00000541963 TRAPPC8Q9Y2L5 1435 aa8.22□□□□□ -1.09
CPSF7-220ENST00000541963 NCOA2Q15596 1464 aa8.22□□□□□ -1.09
CPSF7-220ENST00000541963 BACH1O14867 736 aa8.22□□□□□ -1.09
CPSF7-220ENST00000541963 TSPY4P0CV99 314 aa8.22□□□□□ -1.09
CPSF7-220ENST00000541963 TSPY10P0CW01 314 aa8.22□□□□□ -1.09
CPSF7-220ENST00000541963 PPP1R26Q5T8A7 1209 aaPredicted RBP8.22□□□□□ -1.09
CPSF7-220ENST00000541963 CYP2U1Q7Z449 544 aa8.22□□□□□ -1.09
CPSF7-220ENST00000541963 EMID1Q96A84 441 aaPredicted RBP8.22□□□□□ -1.09
CPSF7-220ENST00000541963 TMPRSS4Q9NRS4 437 aa8.22□□□□□ -1.09
CPSF7-220ENST00000541963 MTMR7Q9Y216 660 aa8.22□□□□□ -1.09
CPSF7-220ENST00000541963 KDM5CP41229 1560 aa8.22□□□□□ -1.09
CPSF7-220ENST00000541963 ARHGEF12Q9NZN5 1544 aa8.21□□□□□ -1.1
CPSF7-220ENST00000541963 TTC24A2A3L6 582 aaPredicted RBP8.21□□□□□ -1.1
CPSF7-220ENST00000541963 SFI1A8K8P3 1242 aa8.21□□□□□ -1.1
CPSF7-220ENST00000541963 ATP2B4P23634 1241 aa8.21□□□□□ -1.1
CPSF7-220ENST00000541963 ARID4AP29374 1257 aaPredicted RBP8.21□□□□□ -1.1
CPSF7-220ENST00000541963 SCTRP47872 440 aa8.21□□□□□ -1.1
CPSF7-220ENST00000541963 ESCO1Q5FWF5 840 aa8.21□□□□□ -1.1
CPSF7-220ENST00000541963 SNIP1Q8TAD8 396 aaKnown RBP8.21□□□□□ -1.1
CPSF7-220ENST00000541963 KIAA1024Q9UPX6 916 aa8.21□□□□□ -1.1
CPSF7-220ENST00000541963 SAMD9LQ8IVG5 1584 aa8.21□□□□□ -1.1
CPSF7-220ENST00000541963 HECW2Q9P2P5 1572 aa8.21□□□□□ -1.1
CPSF7-220ENST00000541963 BCORL1Q5H9F3 1711 aa8.2□□□□□ -1.1
CPSF7-220ENST00000541963 TMCO4Q5TGY1 634 aa8.2□□□□□ -1.1
CPSF7-220ENST00000541963 CYP4X1Q8N118 509 aa8.2□□□□□ -1.1
CPSF7-220ENST00000541963 ZNF784Q8NCA9 323 aaPredicted RBP8.2□□□□□ -1.1
CPSF7-220ENST00000541963 ZNF644Q9H582 1327 aaPredicted RBP8.2□□□□□ -1.1
CPSF7-220ENST00000541963 ADAMTSL3P82987 1691 aa8.2□□□□□ -1.1
CPSF7-220ENST00000541963 SYCP2Q9BX26 1530 aa8.19□□□□□ -1.1
CPSF7-220ENST00000541963 M0R2N6 131 aa8.19□□□□□ -1.1
CPSF7-220ENST00000541963 SSFA2P28290 1259 aa8.19□□□□□ -1.1
CPSF7-220ENST00000541963 PTPRMP28827 1452 aa8.19□□□□□ -1.1
CPSF7-220ENST00000541963 GNRH1P01148 92 aa8.18□□□□□ -1.1
CPSF7-220ENST00000541963 NNTQ13423 1086 aa8.18□□□□□ -1.1
CPSF7-220ENST00000541963 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.18□□□□□ -1.1
CPSF7-220ENST00000541963 OSBPL3Q9H4L5 887 aa8.18□□□□□ -1.1
CPSF7-220ENST00000541963 IVNS1ABPQ9Y6Y0 642 aa8.18□□□□□ -1.1
CPSF7-220ENST00000541963 RTEL1-TNFRSF6BF6WH68 1400 aa8.18□□□□□ -1.1
CPSF7-220ENST00000541963 MIA2Q96PC5 1412 aa8.18□□□□□ -1.1
CPSF7-220ENST00000541963 PRMT3O60678 531 aa8.17□□□□□ -1.1
CPSF7-220ENST00000541963 DKK1O94907 266 aa8.17□□□□□ -1.1
CPSF7-220ENST00000541963 GDF10P55107 478 aa8.17□□□□□ -1.1
CPSF7-220ENST00000541963 REREQ9P2R6 1566 aa8.17□□□□□ -1.1
CPSF7-220ENST00000541963 DIP2CQ9Y2E4 1556 aa8.17□□□□□ -1.1
CPSF7-220ENST00000541963 NR3C2P08235 984 aa8.16□□□□□ -1.1
CPSF7-220ENST00000541963 AGLP35573 1532 aa8.16□□□□□ -1.1
CPSF7-220ENST00000541963 ATP7AQ04656 1500 aa8.16□□□□□ -1.1
CPSF7-220ENST00000541963 CAMSAP2Q08AD1 1489 aa8.16□□□□□ -1.1
CPSF7-220ENST00000541963 MYOM3Q5VTT5 1437 aa8.16□□□□□ -1.1
CPSF7-220ENST00000541963 MADDQ8WXG6 1647 aa8.16□□□□□ -1.1
CPSF7-220ENST00000541963 PRIMPOLQ96LW4 560 aa8.16□□□□□ -1.1
CPSF7-220ENST00000541963 ZNF358Q9NW07 568 aa8.16□□□□□ -1.1
CPSF7-220ENST00000541963 PKD2L1Q9P0L9 805 aa8.16□□□□□ -1.1
CPSF7-220ENST00000541963 MBD5Q9P267 1494 aa8.16□□□□□ -1.1
CPSF7-220ENST00000541963 KIDINS220Q9ULH0 1771 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms