RNA–Protein interactions for RNA: ENST00000541735.5

DMD-228, Transcript of dystrophin, humanhuman

TSL 5 BASIC

Gene DMD, Length 7,080 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DMD-228ENST00000541735 ARHGAP5Q13017 1502 aa7.35□□□□□ -1.23
DMD-228ENST00000541735 ANKRD18BA2A2Z9 1011 aa7.34□□□□□ -1.23
DMD-228ENST00000541735 CCER2I3L3R5 266 aa7.34□□□□□ -1.23
DMD-228ENST00000541735 SORBS3O60504 671 aa7.34□□□□□ -1.23
DMD-228ENST00000541735 CALM1P0DP23 149 aa7.34□□□□□ -1.23
DMD-228ENST00000541735 CALM2P0DP24 149 aa7.34□□□□□ -1.23
DMD-228ENST00000541735 CALM3P0DP25 149 aa7.34□□□□□ -1.23
DMD-228ENST00000541735 CAMK4Q16566 473 aa7.34□□□□□ -1.23
DMD-228ENST00000541735 FAM47CQ5HY64 1035 aa7.34□□□□□ -1.23
DMD-228ENST00000541735 SLF2Q8IX21 1173 aa7.34□□□□□ -1.23
DMD-228ENST00000541735 JMYQ8N9B5 988 aa7.34□□□□□ -1.23
DMD-228ENST00000541735 CTCFLQ8NI51 663 aaPredicted RBP7.34□□□□□ -1.23
DMD-228ENST00000541735 ZBTB24O43167 697 aaPredicted RBP7.34□□□□□ -1.23
DMD-228ENST00000541735 SKOR2Q2VWA4 1001 aaPredicted RBP7.34□□□□□ -1.23
DMD-228ENST00000541735 TDRD12Q587J7 1177 aaKnown RBP7.34□□□□□ -1.23
DMD-228ENST00000541735 LARP1BQ659C4 914 aaKnown RBP7.34□□□□□ -1.23
DMD-228ENST00000541735 PPP4R4Q6NUP7 873 aa7.34□□□□□ -1.23
DMD-228ENST00000541735 TTC30BQ8N4P2 665 aa7.34□□□□□ -1.23
DMD-228ENST00000541735 ZBTB9Q96C00 473 aa7.34□□□□□ -1.23
DMD-228ENST00000541735 TSG101Q99816 390 aa7.34□□□□□ -1.23
DMD-228ENST00000541735 NACA2Q9H009 215 aa7.34□□□□□ -1.23
DMD-228ENST00000541735 NDC80O14777 642 aa7.34□□□□□ -1.23
DMD-228ENST00000541735 HAND2P61296 217 aa7.34□□□□□ -1.23
DMD-228ENST00000541735 CPLX3Q8WVH0 158 aa7.34□□□□□ -1.23
DMD-228ENST00000541735 DMRT2Q9Y5R5 561 aa7.34□□□□□ -1.23
DMD-228ENST00000541735 CAPN15O75808 1086 aa7.34□□□□□ -1.23
DMD-228ENST00000541735 ISM2Q6H9L7 571 aa7.34□□□□□ -1.23
DMD-228ENST00000541735 ARHGAP27Q6ZUM4 889 aa7.34□□□□□ -1.23
DMD-228ENST00000541735 RNF169Q8NCN4 708 aa7.34□□□□□ -1.23
DMD-228ENST00000541735 RTEL1-TNFRSF6BF6WH68 1400 aa7.33□□□□□ -1.24
DMD-228ENST00000541735 BAG4O95429 457 aaKnown RBP7.33□□□□□ -1.24
DMD-228ENST00000541735 NCBP1Q09161 790 aaKnown RBP7.33□□□□□ -1.24
DMD-228ENST00000541735 MAP3K12Q12852 859 aa7.33□□□□□ -1.24
DMD-228ENST00000541735 ERCC4Q92889 916 aaPredicted RBP7.33□□□□□ -1.24
DMD-228ENST00000541735 TNMDQ9H2S6 317 aa7.33□□□□□ -1.24
DMD-228ENST00000541735 PPP2R5CQ13362 524 aa7.33□□□□□ -1.24
DMD-228ENST00000541735 UIMC1Q96RL1 719 aa7.33□□□□□ -1.24
DMD-228ENST00000541735 BCS1LQ9Y276 419 aa7.33□□□□□ -1.24
DMD-228ENST00000541735 FAM170AA1A519 330 aa7.33□□□□□ -1.24
DMD-228ENST00000541735 FCHSD2O94868 740 aa7.33□□□□□ -1.24
DMD-228ENST00000541735 MAP2K1Q02750 393 aaPredicted RBP7.33□□□□□ -1.24
DMD-228ENST00000541735 TMEM266Q2M3C6 531 aa7.33□□□□□ -1.24
DMD-228ENST00000541735 TCP11L2Q8N4U5 519 aa7.33□□□□□ -1.24
DMD-228ENST00000541735 GNAT3A8MTJ3 354 aa7.33□□□□□ -1.24
DMD-228ENST00000541735 CHST3Q7LGC8 479 aa7.33□□□□□ -1.24
DMD-228ENST00000541735 STK32BQ9NY57 414 aa7.33□□□□□ -1.24
DMD-228ENST00000541735 CFAP45Q9UL16 551 aa7.33□□□□□ -1.24
DMD-228ENST00000541735 CEP83Q9Y592 693 aa7.33□□□□□ -1.24
DMD-228ENST00000541735 TMEM110-MUSTN1A8MSY1 372 aa7.33□□□□□ -1.24
DMD-228ENST00000541735 ABL1P00519 1130 aa7.33□□□□□ -1.24
DMD-228ENST00000541735 CCT2P78371 535 aaKnown RBP7.33□□□□□ -1.24
DMD-228ENST00000541735 MKRN3Q13064 507 aaKnown RBP7.33□□□□□ -1.24
DMD-228ENST00000541735 KMT5BQ4FZB7 885 aa7.33□□□□□ -1.24
DMD-228ENST00000541735 RAB3IL1Q8TBN0 382 aa7.33□□□□□ -1.24
DMD-228ENST00000541735 INCENPQ9NQS7 918 aa7.33□□□□□ -1.24
DMD-228ENST00000541735 IFIT3O14879 490 aaKnown RBP7.33□□□□□ -1.24
DMD-228ENST00000541735 SMARCA5O60264 1052 aaPredicted RBP7.33□□□□□ -1.24
DMD-228ENST00000541735 RNF187Q5TA31 235 aaPredicted RBP7.33□□□□□ -1.24
DMD-228ENST00000541735 BLOC1S2Q6QNY1 142 aa7.33□□□□□ -1.24
DMD-228ENST00000541735 IQCA1Q86XH1 822 aa7.33□□□□□ -1.24
DMD-228ENST00000541735 CCDC194A0A1B0GVG4 234 aa7.32□□□□□ -1.24
DMD-228ENST00000541735 CCDC174Q6PII3 467 aa7.32□□□□□ -1.24
DMD-228ENST00000541735 NSFL1CQ9UNZ2 370 aaKnown RBP7.32□□□□□ -1.24
DMD-228ENST00000541735 PHLDB1Q86UU1 1377 aa7.32□□□□□ -1.24
DMD-228ENST00000541735 CDKL5O76039 1030 aa7.32□□□□□ -1.24
DMD-228ENST00000541735 FERP16591 822 aa7.32□□□□□ -1.24
DMD-228ENST00000541735 FERMT3Q86UX7 667 aa7.32□□□□□ -1.24
DMD-228ENST00000541735 TSNARE1Q96NA8 513 aa7.32□□□□□ -1.24
DMD-228ENST00000541735 KAT14Q9H8E8 782 aa7.32□□□□□ -1.24
DMD-228ENST00000541735 PDRG1Q9NUG6 133 aa7.32□□□□□ -1.24
DMD-228ENST00000541735 EXOC6BQ9Y2D4 811 aa7.32□□□□□ -1.24
DMD-228ENST00000541735 PRKCSHP14314 528 aaPredicted RBP7.32□□□□□ -1.24
DMD-228ENST00000541735 GABPAQ06546 454 aa7.32□□□□□ -1.24
DMD-228ENST00000541735 RAB3GAP1Q15042 981 aa7.32□□□□□ -1.24
DMD-228ENST00000541735 RNF34Q969K3 372 aa7.32□□□□□ -1.24
DMD-228ENST00000541735 DACH1Q9UI36 760 aa7.32□□□□□ -1.24
DMD-228ENST00000541735 SLC12A7Q9Y666 1083 aa7.32□□□□□ -1.24
DMD-228ENST00000541735 BACH1O14867 736 aa7.32□□□□□ -1.24
DMD-228ENST00000541735 MAPK8IP2Q13387 824 aaPredicted RBP7.32□□□□□ -1.24
DMD-228ENST00000541735 CDCA7Q9BWT1 371 aaPredicted RBP7.32□□□□□ -1.24
DMD-228ENST00000541735 CLSTN2Q9H4D0 955 aa7.32□□□□□ -1.24
DMD-228ENST00000541735 TSPY3P0CV98 308 aa7.31□□□□□ -1.24
DMD-228ENST00000541735 TSPY8P0CW00 308 aa7.31□□□□□ -1.24
DMD-228ENST00000541735 ZNF397Q8NF99 534 aaPredicted RBP7.31□□□□□ -1.24
DMD-228ENST00000541735 LMTK3Q96Q04 1460 aa7.31□□□□□ -1.24
DMD-228ENST00000541735 CASTP20810 708 aaKnown RBP7.31□□□□□ -1.24
DMD-228ENST00000541735 LDHAL6AQ6ZMR3 332 aa7.31□□□□□ -1.24
DMD-228ENST00000541735 PNISRQ8TF01 805 aaKnown RBP7.31□□□□□ -1.24
DMD-228ENST00000541735 MRVI1Q9Y6F6 885 aa7.31□□□□□ -1.24
DMD-228ENST00000541735 POGZQ7Z3K3 1410 aa7.31□□□□□ -1.24
DMD-228ENST00000541735 A0A087WZG4 1122 aa7.31□□□□□ -1.24
DMD-228ENST00000541735 ZWINTO95229 277 aa7.31□□□□□ -1.24
DMD-228ENST00000541735 BAG3O95817 575 aa7.31□□□□□ -1.24
DMD-228ENST00000541735 FILIP1Q7Z7B0 1213 aa7.31□□□□□ -1.24
DMD-228ENST00000541735 CCDC39Q9UFE4 941 aa7.31□□□□□ -1.24
DMD-228ENST00000541735 CTNNA3Q9UI47 895 aa7.31□□□□□ -1.24
DMD-228ENST00000541735 AKAP2Q9Y2D5 859 aa7.31□□□□□ -1.24
DMD-228ENST00000541735 PPP1R12AO14974 1030 aaPredicted RBP7.31□□□□□ -1.24
DMD-228ENST00000541735 PSMC4P43686 418 aa7.31□□□□□ -1.24
DMD-228ENST00000541735 RASA3Q14644 834 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms