RNA–Protein interactions for RNA: ENST00000541562.5

VARS2-211, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2 BASIC

Gene VARS2, Length 3,566 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-211ENST00000541562 AXIN2Q9Y2T1 843 aa18.26■□□□□ 0.51
VARS2-211ENST00000541562 SLFNL1Q499Z3 407 aa18.26■□□□□ 0.51
VARS2-211ENST00000541562 C1orf141Q5JVX7 400 aa18.26■□□□□ 0.51
VARS2-211ENST00000541562 ZNF830Q96NB3 372 aaPredicted RBP18.26■□□□□ 0.51
VARS2-211ENST00000541562 LMBRD1Q9NUN5 540 aa18.26■□□□□ 0.51
VARS2-211ENST00000541562 TMEM63CQ9P1W3 806 aa18.26■□□□□ 0.51
VARS2-211ENST00000541562 VIRMAQ69YN4 1812 aaKnown RBP18.25■□□□□ 0.51
VARS2-211ENST00000541562 PRPF40BQ6NWY9 871 aaKnown RBP18.25■□□□□ 0.51
VARS2-211ENST00000541562 KNDC1Q76NI1 1749 aa18.25■□□□□ 0.51
VARS2-211ENST00000541562 VPS37CA5D8V6 355 aaPredicted RBP18.25■□□□□ 0.51
VARS2-211ENST00000541562 GOLGB1Q14789 3259 aaKnown RBP18.24■□□□□ 0.51
VARS2-211ENST00000541562 KDM4AO75164 1064 aa18.24■□□□□ 0.51
VARS2-211ENST00000541562 KIAA1211Q6ZU35 1233 aa18.24■□□□□ 0.51
VARS2-211ENST00000541562 AACSQ86V21 672 aa18.24■□□□□ 0.51
VARS2-211ENST00000541562 DNAAF4Q8WXU2 420 aa18.24■□□□□ 0.51
VARS2-211ENST00000541562 RIMBP3CA6NJZ7 1639 aa18.24■□□□□ 0.51
VARS2-211ENST00000541562 RIMBP3BA6NNM3 1639 aa18.24■□□□□ 0.51
VARS2-211ENST00000541562 RIMBP3Q9UFD9 1639 aa18.24■□□□□ 0.51
VARS2-211ENST00000541562 MCCP23508 829 aa18.24■□□□□ 0.51
VARS2-211ENST00000541562 RBM10P98175 930 aaKnown RBP18.24■□□□□ 0.51
VARS2-211ENST00000541562 CCDC83Q8IWF9 413 aa18.24■□□□□ 0.51
VARS2-211ENST00000541562 CASTP20810 708 aaKnown RBP18.24■□□□□ 0.51
VARS2-211ENST00000541562 IGSF1Q8N6C5 1336 aa18.23■□□□□ 0.51
VARS2-211ENST00000541562 PTMAP06454 111 aaKnown RBP18.23■□□□□ 0.51
VARS2-211ENST00000541562 TLR7Q9NYK1 1049 aaKnown RBP18.23■□□□□ 0.51
VARS2-211ENST00000541562 DIAPH3Q9NSV4 1193 aa18.23■□□□□ 0.51
VARS2-211ENST00000541562 SBNO1A3KN83 1393 aa18.23■□□□□ 0.51
VARS2-211ENST00000541562 NUCB2P80303 420 aa18.22■□□□□ 0.51
VARS2-211ENST00000541562 IFIT2P09913 472 aaKnown RBP18.22■□□□□ 0.51
VARS2-211ENST00000541562 PTH1RQ03431 593 aa18.22■□□□□ 0.51
VARS2-211ENST00000541562 CIZ1Q9ULV3 898 aaPredicted RBP18.22■□□□□ 0.51
VARS2-211ENST00000541562 LARGE1O95461 756 aa18.21■□□□□ 0.51
VARS2-211ENST00000541562 ADCK5Q3MIX3 580 aa18.21■□□□□ 0.51
VARS2-211ENST00000541562 RIC3Q7Z5B4 369 aa18.21■□□□□ 0.51
VARS2-211ENST00000541562 FAM227BQ96M60 508 aa18.21■□□□□ 0.51
VARS2-211ENST00000541562 LRRC2Q9BYS8 371 aa18.21■□□□□ 0.51
VARS2-211ENST00000541562 CNPY2Q9Y2B0 182 aa18.21■□□□□ 0.51
VARS2-211ENST00000541562 PPP6R1Q9UPN7 881 aa18.21■□□□□ 0.51
VARS2-211ENST00000541562 EIF4A1P60842 406 aaKnown RBP18.21■□□□□ 0.51
VARS2-211ENST00000541562 ANKRD24Q8TF21 1146 aa18.21■□□□□ 0.51
VARS2-211ENST00000541562 CDC42BPGQ6DT37 1551 aa18.2■□□□□ 0.5
VARS2-211ENST00000541562 NFATC2IPQ8NCF5 419 aa18.2■□□□□ 0.5
VARS2-211ENST00000541562 JAKMIP1Q96N16 626 aaKnown RBP18.2■□□□□ 0.5
VARS2-211ENST00000541562 MAP3K5Q99683 1374 aa18.2■□□□□ 0.5
VARS2-211ENST00000541562 OVOS2A0A0J9YW53 1432 aa18.2■□□□□ 0.5
VARS2-211ENST00000541562 OVOS2Q6IE36 1432 aa18.2■□□□□ 0.5
VARS2-211ENST00000541562 DIP2BQ9P265 1576 aa18.2■□□□□ 0.5
VARS2-211ENST00000541562 GCP02774 474 aa18.2■□□□□ 0.5
VARS2-211ENST00000541562 KAT6BQ8WYB5 2073 aa18.19■□□□□ 0.5
VARS2-211ENST00000541562 FBXW7Q969H0 707 aa18.19■□□□□ 0.5
VARS2-211ENST00000541562 TAF6LQ9Y6J9 622 aa18.19■□□□□ 0.5
VARS2-211ENST00000541562 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.19■□□□□ 0.5
VARS2-211ENST00000541562 C17orf53Q8N3J3 647 aaPredicted RBP18.19■□□□□ 0.5
VARS2-211ENST00000541562 DNAJC2Q99543 621 aaKnown RBP18.19■□□□□ 0.5
VARS2-211ENST00000541562 CEBPZQ03701 1054 aaKnown RBP18.19■□□□□ 0.5
VARS2-211ENST00000541562 AK2P54819 239 aa18.18■□□□□ 0.5
VARS2-211ENST00000541562 KLHL40Q2TBA0 621 aa18.18■□□□□ 0.5
VARS2-211ENST00000541562 SKOR2Q2VWA4 1001 aaPredicted RBP18.18■□□□□ 0.5
VARS2-211ENST00000541562 TBX22Q9Y458 520 aa18.18■□□□□ 0.5
VARS2-211ENST00000541562 PROSER2Q86WR7 435 aaPredicted RBP18.17■□□□□ 0.5
VARS2-211ENST00000541562 KIAA0232Q92628 1395 aa18.17■□□□□ 0.5
VARS2-211ENST00000541562 MSNP26038 577 aaKnown RBP18.17■□□□□ 0.5
VARS2-211ENST00000541562 MYD88Q99836 296 aa18.17■□□□□ 0.5
VARS2-211ENST00000541562 CLASRPQ8N2M8 674 aaKnown RBP18.16■□□□□ 0.5
VARS2-211ENST00000541562 R3HCC1Q9Y3T6 440 aaKnown RBP18.16■□□□□ 0.5
VARS2-211ENST00000541562 TTC21AQ8NDW8 1320 aa18.16■□□□□ 0.5
VARS2-211ENST00000541562 NRXN3Q9Y4C0 1643 aa18.16■□□□□ 0.5
VARS2-211ENST00000541562 CCDC129Q6ZRS4 1044 aa18.16■□□□□ 0.5
VARS2-211ENST00000541562 USP48Q86UV5 1035 aa18.16■□□□□ 0.5
VARS2-211ENST00000541562 BICC1Q9H694 974 aaKnown RBP18.16■□□□□ 0.5
VARS2-211ENST00000541562 PEAK1Q9H792 1746 aa18.16■□□□□ 0.5
VARS2-211ENST00000541562 FAM177BA6PVY3 158 aa18.16■□□□□ 0.5
VARS2-211ENST00000541562 CAMK4Q16566 473 aa18.16■□□□□ 0.5
VARS2-211ENST00000541562 RGPD8O14715 1765 aaPredicted RBP18.16■□□□□ 0.5
VARS2-211ENST00000541562 SUCLG2Q96I99 432 aa18.15■□□□□ 0.5
VARS2-211ENST00000541562 TFIP11Q9UBB9 837 aaKnown RBP18.15■□□□□ 0.5
VARS2-211ENST00000541562 BEND3Q5T5X7 828 aa18.15■□□□□ 0.5
VARS2-211ENST00000541562 ANKLE2Q86XL3 938 aa18.14■□□□□ 0.49
VARS2-211ENST00000541562 NEUROD6Q96NK8 337 aa18.14■□□□□ 0.49
VARS2-211ENST00000541562 FSD1Q9BTV5 496 aa18.14■□□□□ 0.49
VARS2-211ENST00000541562 SNX14Q9Y5W7 946 aa18.14■□□□□ 0.49
VARS2-211ENST00000541562 COPS6Q7L5N1 327 aa18.14■□□□□ 0.49
VARS2-211ENST00000541562 RAB11FIP4Q86YS3 637 aa18.14■□□□□ 0.49
VARS2-211ENST00000541562 DDX11Q96FC9 970 aa18.14■□□□□ 0.49
VARS2-211ENST00000541562 IBTKQ9P2D0 1353 aaPredicted RBP18.14■□□□□ 0.49
VARS2-211ENST00000541562 PLEKHO1Q53GL0 409 aaPredicted RBP18.14■□□□□ 0.49
VARS2-211ENST00000541562 DNTTIP2Q5QJE6 756 aaKnown RBP18.14■□□□□ 0.49
VARS2-211ENST00000541562 SEC62Q99442 399 aaKnown RBP18.14■□□□□ 0.49
VARS2-211ENST00000541562 USP16Q9Y5T5 823 aa18.14■□□□□ 0.49
VARS2-211ENST00000541562 SPATA31D1Q6ZQQ2 1576 aa18.13■□□□□ 0.49
VARS2-211ENST00000541562 ARHGEF10O15013 1369 aa18.13■□□□□ 0.49
VARS2-211ENST00000541562 CNTROBQ8N137 903 aa18.13■□□□□ 0.49
VARS2-211ENST00000541562 IP6K1Q92551 441 aa18.13■□□□□ 0.49
VARS2-211ENST00000541562 KIF1BPQ96EK5 621 aa18.13■□□□□ 0.49
VARS2-211ENST00000541562 NCOA3Q9Y6Q9 1424 aa18.13■□□□□ 0.49
VARS2-211ENST00000541562 ANKRD26Q9UPS8 1709 aa18.13■□□□□ 0.49
VARS2-211ENST00000541562 G3BP1Q13283 466 aaKnown RBP eCLIP18.13■□□□□ 0.491e-6■■□□□ 13
VARS2-211ENST00000541562 HSP90AB3PQ58FF7 597 aa18.13■□□□□ 0.49
VARS2-211ENST00000541562 XAGE3Q8WTP9 111 aa18.13■□□□□ 0.49
VARS2-211ENST00000541562 SMC3Q9UQE7 1217 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms