RNA–Protein interactions for RNA: ENST00000541342.2

SPIDR-227, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SPIDR, Length 3,311 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-227ENST00000541342 GIGYF1O75420 1035 aaPredicted RBP21.22■□□□□ 0.99
SPIDR-227ENST00000541342 PXDNLA1KZ92 1463 aa21.21■□□□□ 0.99
SPIDR-227ENST00000541342 RPAP2Q8IXW5 612 aaPredicted RBP21.2■□□□□ 0.98
SPIDR-227ENST00000541342 MRC1P22897 1456 aa21.2■□□□□ 0.98
SPIDR-227ENST00000541342 ANXA1P04083 346 aa21.2■□□□□ 0.98
SPIDR-227ENST00000541342 RAB3GAP1Q15042 981 aa21.2■□□□□ 0.98
SPIDR-227ENST00000541342 TOM1L2Q6ZVM7 507 aa21.2■□□□□ 0.98
SPIDR-227ENST00000541342 NFATC2IPQ8NCF5 419 aa21.2■□□□□ 0.98
SPIDR-227ENST00000541342 DCTPP1Q9H773 170 aa21.2■□□□□ 0.98
SPIDR-227ENST00000541342 C5P01031 1676 aa21.2■□□□□ 0.98
SPIDR-227ENST00000541342 RBM42Q9BTD8 480 aaKnown RBP21.19■□□□□ 0.98
SPIDR-227ENST00000541342 EIF5BO60841 1220 aaKnown RBP21.19■□□□□ 0.98
SPIDR-227ENST00000541342 SLC39A6Q13433 755 aa21.19■□□□□ 0.98
SPIDR-227ENST00000541342 LTBP4Q8N2S1 1624 aa21.18■□□□□ 0.98
SPIDR-227ENST00000541342 MRE11P49959 708 aa21.18■□□□□ 0.98
SPIDR-227ENST00000541342 CIZ1Q9ULV3 898 aaPredicted RBP21.18■□□□□ 0.98
SPIDR-227ENST00000541342 ZNF790Q6PG37 636 aa21.17■□□□□ 0.98
SPIDR-227ENST00000541342 DCAF5Q96JK2 942 aa21.17■□□□□ 0.98
SPIDR-227ENST00000541342 HSP90AB1P08238 724 aaKnown RBP21.17■□□□□ 0.98
SPIDR-227ENST00000541342 SHANK3Q9BYB0 1731 aa21.17■□□□□ 0.98
SPIDR-227ENST00000541342 PROSER3Q2NL68 480 aa21.16■□□□□ 0.98
SPIDR-227ENST00000541342 GRPEL1Q9HAV7 217 aa21.16■□□□□ 0.98
SPIDR-227ENST00000541342 GSPT1P15170 499 aaKnown RBP21.16■□□□□ 0.98
SPIDR-227ENST00000541342 LARP1Q6PKG0 1096 aaKnown RBP21.16■□□□□ 0.98
SPIDR-227ENST00000541342 GAS2L3Q86XJ1 694 aa21.15■□□□□ 0.98
SPIDR-227ENST00000541342 CHMP4AQ9BY43 222 aa21.15■□□□□ 0.98
SPIDR-227ENST00000541342 STRN4Q9NRL3 753 aa21.15■□□□□ 0.98
SPIDR-227ENST00000541342 DBF4Q9UBU7 674 aaPredicted RBP21.15■□□□□ 0.98
SPIDR-227ENST00000541342 CARD10Q9BWT7 1032 aa21.14■□□□□ 0.98
SPIDR-227ENST00000541342 FOXD4L1Q9NU39 408 aa21.14■□□□□ 0.98
SPIDR-227ENST00000541342 AK9Q5TCS8 1911 aa21.14■□□□□ 0.98
SPIDR-227ENST00000541342 GNAI2P04899 355 aa21.14■□□□□ 0.97
SPIDR-227ENST00000541342 USP44Q9H0E7 712 aa21.14■□□□□ 0.97
SPIDR-227ENST00000541342 AHDC1Q5TGY3 1603 aaPredicted RBP21.14■□□□□ 0.97
SPIDR-227ENST00000541342 ADCY9O60503 1353 aa21.14■□□□□ 0.97
SPIDR-227ENST00000541342 K7ELQ4 463 aaPredicted RBP21.14■□□□□ 0.97
SPIDR-227ENST00000541342 PI4KAP2A4QPH2 592 aa21.13■□□□□ 0.97
SPIDR-227ENST00000541342 PI4KAP1Q8N8J0 262 aa21.13■□□□□ 0.97
SPIDR-227ENST00000541342 ZCRB1Q8TBF4 217 aaKnown RBP21.12■□□□□ 0.97
SPIDR-227ENST00000541342 GNAI3P08754 354 aa21.12■□□□□ 0.97
SPIDR-227ENST00000541342 PLEKHM2Q8IWE5 1019 aa21.11■□□□□ 0.97
SPIDR-227ENST00000541342 PCDH11XQ9BZA7 1347 aa21.11■□□□□ 0.97
SPIDR-227ENST00000541342 PCDH11YQ9BZA8 1340 aa21.11■□□□□ 0.97
SPIDR-227ENST00000541342 CLCN1P35523 988 aa21.11■□□□□ 0.97
SPIDR-227ENST00000541342 PDIA6Q15084 440 aa21.11■□□□□ 0.97
SPIDR-227ENST00000541342 DNAAF4Q8WXU2 420 aa21.11■□□□□ 0.97
SPIDR-227ENST00000541342 ZNF496Q96IT1 587 aaPredicted RBP21.11■□□□□ 0.97
SPIDR-227ENST00000541342 IL2RBP14784 551 aa21.11■□□□□ 0.97
SPIDR-227ENST00000541342 EVA1CP58658 441 aa21.11■□□□□ 0.97
SPIDR-227ENST00000541342 BEND3Q5T5X7 828 aa21.11■□□□□ 0.97
SPIDR-227ENST00000541342 GLI3P10071 1580 aa21.11■□□□□ 0.97
SPIDR-227ENST00000541342 COL22A1Q8NFW1 1626 aaPredicted RBP21.1■□□□□ 0.97
SPIDR-227ENST00000541342 GBP4Q96PP9 640 aa21.1■□□□□ 0.97
SPIDR-227ENST00000541342 SRCIN1Q9C0H9 1055 aa21.1■□□□□ 0.97
SPIDR-227ENST00000541342 CDC45O75419 566 aa21.09■□□□□ 0.97
SPIDR-227ENST00000541342 ISY1Q9ULR0 285 aaKnown RBP21.09■□□□□ 0.97
SPIDR-227ENST00000541342 LRRFIP2Q9Y608 721 aaKnown RBP21.09■□□□□ 0.97
SPIDR-227ENST00000541342 ERBB4Q15303 1308 aa21.09■□□□□ 0.97
SPIDR-227ENST00000541342 CABP4P57796 275 aa21.09■□□□□ 0.97
SPIDR-227ENST00000541342 COL16A1Q07092 1604 aaPredicted RBP21.09■□□□□ 0.97
SPIDR-227ENST00000541342 SSFA2P28290 1259 aa21.09■□□□□ 0.97
SPIDR-227ENST00000541342 C16orf71Q8IYS4 520 aaPredicted RBP21.09■□□□□ 0.97
SPIDR-227ENST00000541342 PNMA6EA0A0J9YXQ4 647 aa21.08■□□□□ 0.97
SPIDR-227ENST00000541342 HMMRO75330 724 aa21.08■□□□□ 0.96
SPIDR-227ENST00000541342 BTG4Q9NY30 223 aa21.08■□□□□ 0.96
SPIDR-227ENST00000541342 COL14A1Q05707 1796 aaKnown RBP21.08■□□□□ 0.96
SPIDR-227ENST00000541342 DDX21Q9NR30 783 aaKnown RBP eCLIP21.07■□□□□ 0.96
SPIDR-227ENST00000541342 SMARCA5O60264 1052 aaPredicted RBP21.07■□□□□ 0.96
SPIDR-227ENST00000541342 HYPKQ9NX55 129 aa21.07■□□□□ 0.96
SPIDR-227ENST00000541342 APBB1O00213 710 aa21.07■□□□□ 0.96
SPIDR-227ENST00000541342 MAP3K2Q9Y2U5 619 aa21.07■□□□□ 0.96
SPIDR-227ENST00000541342 UBTFL1P0CB47 393 aaPredicted RBP21.06■□□□□ 0.96
SPIDR-227ENST00000541342 ATP8B2P98198 1209 aa21.06■□□□□ 0.96
SPIDR-227ENST00000541342 CLEC17AQ6ZS10 378 aa21.06■□□□□ 0.96
SPIDR-227ENST00000541342 TTC5Q8N0Z6 440 aa21.06■□□□□ 0.96
SPIDR-227ENST00000541342 NBPF7P0C2Y1 421 aaPredicted RBP21.06■□□□□ 0.96
SPIDR-227ENST00000541342 NKX1-1Q15270 411 aaPredicted RBP21.06■□□□□ 0.96
SPIDR-227ENST00000541342 OTUD7AQ8TE49 926 aaPredicted RBP21.06■□□□□ 0.96
SPIDR-227ENST00000541342 HSP90AA1P07900 732 aaKnown RBP21.05■□□□□ 0.96
SPIDR-227ENST00000541342 KSR2Q6VAB6 950 aa21.05■□□□□ 0.96
SPIDR-227ENST00000541342 TOGARAM1Q9Y4F4 1720 aa21.05■□□□□ 0.96
SPIDR-227ENST00000541342 UBR2Q8IWV8 1755 aa21.05■□□□□ 0.96
SPIDR-227ENST00000541342 TTC22Q5TAA0 569 aa21.05■□□□□ 0.96
SPIDR-227ENST00000541342 USP16Q9Y5T5 823 aa21.05■□□□□ 0.96
SPIDR-227ENST00000541342 DDX54Q8TDD1 881 aaKnown RBP21.04■□□□□ 0.96
SPIDR-227ENST00000541342 PAPPAQ13219 1627 aa21.04■□□□□ 0.96
SPIDR-227ENST00000541342 LAMB4A4D0S4 1761 aa21.04■□□□□ 0.96
SPIDR-227ENST00000541342 SNRPA1P09661 255 aaKnown RBP21.04■□□□□ 0.96
SPIDR-227ENST00000541342 FMNL2Q96PY5 1086 aa21.04■□□□□ 0.96
SPIDR-227ENST00000541342 EXOC6BQ9Y2D4 811 aa21.04■□□□□ 0.96
SPIDR-227ENST00000541342 SKOR2Q2VWA4 1001 aaPredicted RBP21.03■□□□□ 0.96
SPIDR-227ENST00000541342 PHLPP1O60346 1717 aa21.03■□□□□ 0.96
SPIDR-227ENST00000541342 AIMP1Q12904 312 aaKnown RBP21.03■□□□□ 0.96
SPIDR-227ENST00000541342 ERVV-2B6SEH9 535 aa21.02■□□□□ 0.96
SPIDR-227ENST00000541342 MYL6BP14649 208 aa21.02■□□□□ 0.96
SPIDR-227ENST00000541342 LRP10Q7Z4F1 713 aa21.02■□□□□ 0.96
SPIDR-227ENST00000541342 USP26Q9BXU7 913 aa21.01■□□□□ 0.95
SPIDR-227ENST00000541342 PIP4K2AP48426 406 aaPredicted RBP21.01■□□□□ 0.95
SPIDR-227ENST00000541342 KCPQ6ZWJ8 1503 aa21■□□□□ 0.95
SPIDR-227ENST00000541342 BAG4O95429 457 aaKnown RBP21■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms