RNA–Protein interactions for RNA: ENST00000541329.1

NPIPB4-213, Transcript of nuclear pore complex interacting protein family member B4, humanhuman

TSL 5

Gene NPIPB4, Length 432 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4-213ENST00000541329 PAPPAQ13219 1627 aa9.56□□□□□ -0.88
NPIPB4-213ENST00000541329 F6X3S4 739 aa9.56□□□□□ -0.88
NPIPB4-213ENST00000541329 ANXA1P04083 346 aa9.56□□□□□ -0.88
NPIPB4-213ENST00000541329 AAMPQ13685 434 aa9.56□□□□□ -0.88
NPIPB4-213ENST00000541329 C1orf115Q9H7X2 142 aa9.56□□□□□ -0.88
NPIPB4-213ENST00000541329 CHPF2Q9P2E5 772 aa9.56□□□□□ -0.88
NPIPB4-213ENST00000541329 DOT1LQ8TEK3 1739 aa9.56□□□□□ -0.88
NPIPB4-213ENST00000541329 UBR2Q8IWV8 1755 aa9.55□□□□□ -0.88
NPIPB4-213ENST00000541329 FLIIQ13045 1269 aa9.55□□□□□ -0.88
NPIPB4-213ENST00000541329 FKBP5Q13451 457 aaPredicted RBP9.55□□□□□ -0.88
NPIPB4-213ENST00000541329 ZNF790Q6PG37 636 aa9.55□□□□□ -0.88
NPIPB4-213ENST00000541329 NPM2Q86SE8 214 aaKnown RBP9.55□□□□□ -0.88
NPIPB4-213ENST00000541329 TTC5Q8N0Z6 440 aa9.55□□□□□ -0.88
NPIPB4-213ENST00000541329 C8orf37Q96NL8 207 aa9.55□□□□□ -0.88
NPIPB4-213ENST00000541329 RWDD1Q9H446 243 aaPredicted RBP9.55□□□□□ -0.88
NPIPB4-213ENST00000541329 PHAXQ9H814 394 aaKnown RBP9.55□□□□□ -0.88
NPIPB4-213ENST00000541329 ZBTB40Q9NUA8 1239 aa9.55□□□□□ -0.88
NPIPB4-213ENST00000541329 DISP2A7MBM2 1401 aa9.55□□□□□ -0.88
NPIPB4-213ENST00000541329 ZBTB7BO15156 539 aaPredicted RBP9.54□□□□□ -0.88
NPIPB4-213ENST00000541329 GIGYF1O75420 1035 aaPredicted RBP9.54□□□□□ -0.88
NPIPB4-213ENST00000541329 HOXB7P09629 217 aa9.54□□□□□ -0.88
NPIPB4-213ENST00000541329 UBE2Q2Q8WVN8 375 aa9.54□□□□□ -0.88
NPIPB4-213ENST00000541329 KAT6BQ8WYB5 2073 aa9.53□□□□□ -0.88
NPIPB4-213ENST00000541329 RGS3P49796 1198 aa9.53□□□□□ -0.88
NPIPB4-213ENST00000541329 INTS3Q68E01 1043 aaKnown RBP9.53□□□□□ -0.88
NPIPB4-213ENST00000541329 ZNF496Q96IT1 587 aaPredicted RBP9.53□□□□□ -0.88
NPIPB4-213ENST00000541329 CHMP4BQ9H444 224 aaKnown RBP9.53□□□□□ -0.88
NPIPB4-213ENST00000541329 GLI3P10071 1580 aa9.53□□□□□ -0.88
NPIPB4-213ENST00000541329 SPATA31A1Q5TZJ5 1347 aa9.53□□□□□ -0.88
NPIPB4-213ENST00000541329 BCL9LQ86UU0 1499 aa9.53□□□□□ -0.88
NPIPB4-213ENST00000541329 HEG1Q9ULI3 1381 aa9.52□□□□□ -0.88
NPIPB4-213ENST00000541329 SLIT2O94813 1529 aa9.52□□□□□ -0.88
NPIPB4-213ENST00000541329 AFDNP55196 1824 aaKnown RBP9.52□□□□□ -0.89
NPIPB4-213ENST00000541329 A0A0G2JS52 829 aa9.52□□□□□ -0.89
NPIPB4-213ENST00000541329 ERVV-2B6SEH9 535 aa9.52□□□□□ -0.89
NPIPB4-213ENST00000541329 EXOC5O00471 708 aa9.52□□□□□ -0.89
NPIPB4-213ENST00000541329 MYL6BP14649 208 aa9.52□□□□□ -0.89
NPIPB4-213ENST00000541329 NKX1-1Q15270 411 aaPredicted RBP9.52□□□□□ -0.89
NPIPB4-213ENST00000541329 NFKBIBQ15653 356 aa9.52□□□□□ -0.89
NPIPB4-213ENST00000541329 PROSER3Q2NL68 480 aa9.52□□□□□ -0.89
NPIPB4-213ENST00000541329 FMNL2Q96PY5 1086 aa9.52□□□□□ -0.89
NPIPB4-213ENST00000541329 KCPQ6ZWJ8 1503 aa9.51□□□□□ -0.89
NPIPB4-213ENST00000541329 TNS2Q63HR2 1409 aa9.51□□□□□ -0.89
NPIPB4-213ENST00000541329 PIP4K2AP48426 406 aaPredicted RBP9.51□□□□□ -0.89
NPIPB4-213ENST00000541329 CCT4P50991 539 aaKnown RBP9.51□□□□□ -0.89
NPIPB4-213ENST00000541329 C1QTNF8P60827 252 aa9.51□□□□□ -0.89
NPIPB4-213ENST00000541329 AIMP1Q12904 312 aaKnown RBP9.51□□□□□ -0.89
NPIPB4-213ENST00000541329 MEIS3Q99687 375 aa9.51□□□□□ -0.89
NPIPB4-213ENST00000541329 CHMP4AQ9BY43 222 aa9.51□□□□□ -0.89
NPIPB4-213ENST00000541329 TMOD3Q9NYL9 352 aa9.51□□□□□ -0.89
NPIPB4-213ENST00000541329 DBF4Q9UBU7 674 aaPredicted RBP9.51□□□□□ -0.89
NPIPB4-213ENST00000541329 SPATA31A5Q5VU36 1347 aa9.51□□□□□ -0.89
NPIPB4-213ENST00000541329 SPATA31A7Q8IWB4 1347 aa9.51□□□□□ -0.89
NPIPB4-213ENST00000541329 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.51□□□□□ -0.89
NPIPB4-213ENST00000541329 ARFGEF2Q9Y6D5 1785 aa9.5□□□□□ -0.89
NPIPB4-213ENST00000541329 PTCD1O75127 700 aaKnown RBP9.5□□□□□ -0.89
NPIPB4-213ENST00000541329 SNRPA1P09661 255 aaKnown RBP9.5□□□□□ -0.89
NPIPB4-213ENST00000541329 UNC5CLQ8IV45 518 aa9.5□□□□□ -0.89
NPIPB4-213ENST00000541329 FAM43AQ8N2R8 423 aa9.5□□□□□ -0.89
NPIPB4-213ENST00000541329 CNKSR2Q8WXI2 1034 aa9.5□□□□□ -0.89
NPIPB4-213ENST00000541329 SYTL4Q96C24 671 aaPredicted RBP9.5□□□□□ -0.89
NPIPB4-213ENST00000541329 DAXXQ9UER7 740 aaPredicted RBP9.5□□□□□ -0.89
NPIPB4-213ENST00000541329 PDZRN3Q9UPQ7 1066 aa9.5□□□□□ -0.89
NPIPB4-213ENST00000541329 USP16Q9Y5T5 823 aa9.5□□□□□ -0.89
NPIPB4-213ENST00000541329 PXDNLA1KZ92 1463 aa9.5□□□□□ -0.89
NPIPB4-213ENST00000541329 PI4KAP2A4QPH2 592 aa9.49□□□□□ -0.89
NPIPB4-213ENST00000541329 HDAC1Q13547 482 aaPredicted RBP9.49□□□□□ -0.89
NPIPB4-213ENST00000541329 DDB1Q16531 1140 aa9.49□□□□□ -0.89
NPIPB4-213ENST00000541329 FAM161AQ3B820 660 aa9.49□□□□□ -0.89
NPIPB4-213ENST00000541329 PI4KAP1Q8N8J0 262 aa9.49□□□□□ -0.89
NPIPB4-213ENST00000541329 HYPKQ9NX55 129 aa9.49□□□□□ -0.89
NPIPB4-213ENST00000541329 THRAP3Q9Y2W1 955 aaKnown RBP9.49□□□□□ -0.89
NPIPB4-213ENST00000541329 ADCY9O60503 1353 aa9.49□□□□□ -0.89
NPIPB4-213ENST00000541329 PSDA5PKW4 1024 aaPredicted RBP9.48□□□□□ -0.89
NPIPB4-213ENST00000541329 HOXD11P31277 338 aaPredicted RBP9.48□□□□□ -0.89
NPIPB4-213ENST00000541329 PDIA6Q15084 440 aa9.48□□□□□ -0.89
NPIPB4-213ENST00000541329 FAM98CQ17RN3 349 aaKnown RBP9.48□□□□□ -0.89
NPIPB4-213ENST00000541329 DEFB132Q7Z7B7 95 aa9.48□□□□□ -0.89
NPIPB4-213ENST00000541329 ZNF784Q8NCA9 323 aaPredicted RBP9.48□□□□□ -0.89
NPIPB4-213ENST00000541329 DNAAF4Q8WXU2 420 aa9.48□□□□□ -0.89
NPIPB4-213ENST00000541329 PIGBQ92521 554 aa9.48□□□□□ -0.89
NPIPB4-213ENST00000541329 ACSBG1Q96GR2 724 aa9.48□□□□□ -0.89
NPIPB4-213ENST00000541329 CDCA7Q9BWT1 371 aaPredicted RBP9.48□□□□□ -0.89
NPIPB4-213ENST00000541329 DDX21Q9NR30 783 aaKnown RBP eCLIP9.48□□□□□ -0.89
NPIPB4-213ENST00000541329 USP21Q9UK80 565 aa9.48□□□□□ -0.89
NPIPB4-213ENST00000541329 ASAP1Q9ULH1 1129 aa9.48□□□□□ -0.89
NPIPB4-213ENST00000541329 MAP3K2Q9Y2U5 619 aa9.48□□□□□ -0.89
NPIPB4-213ENST00000541329 SIRT2Q8IXJ6 389 aa9.47□□□□□ -0.89
NPIPB4-213ENST00000541329 XAGE3Q8WTP9 111 aa9.47□□□□□ -0.89
NPIPB4-213ENST00000541329 RBM42Q9BTD8 480 aaKnown RBP9.47□□□□□ -0.89
NPIPB4-213ENST00000541329 SRCIN1Q9C0H9 1055 aa9.47□□□□□ -0.89
NPIPB4-213ENST00000541329 RTN4Q9NQC3 1192 aaKnown RBP9.47□□□□□ -0.89
NPIPB4-213ENST00000541329 TJP1Q07157 1748 aa9.47□□□□□ -0.89
NPIPB4-213ENST00000541329 NUP188Q5SRE5 1749 aa9.47□□□□□ -0.89
NPIPB4-213ENST00000541329 ATP10DQ9P241 1426 aa9.47□□□□□ -0.89
NPIPB4-213ENST00000541329 SLC34A2O95436 690 aa9.46□□□□□ -0.9
NPIPB4-213ENST00000541329 DDX58O95786 925 aaKnown RBP9.46□□□□□ -0.9
NPIPB4-213ENST00000541329 GNAI2P04899 355 aa9.46□□□□□ -0.9
NPIPB4-213ENST00000541329 GNAI3P08754 354 aa9.46□□□□□ -0.9
NPIPB4-213ENST00000541329 PRIM1P49642 420 aaKnown RBP9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 117.1 ms