RNA–Protein interactions for RNA: ENST00000541171.1

LEMD3-203, Transcript of LEM domain containing 3, humanhuman

TSL 2

Gene LEMD3, Length 856 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-203ENST00000541171 ADAMTS7Q9UKP4 1686 aa32.33■■■□□ 2.77
LEMD3-203ENST00000541171 CEP350Q5VT06 3117 aa32.33■■■□□ 2.77
LEMD3-203ENST00000541171 VIRMAQ69YN4 1812 aaKnown RBP32.33■■■□□ 2.77
LEMD3-203ENST00000541171 C9orf131Q5VYM1 1079 aa32.32■■■□□ 2.76
LEMD3-203ENST00000541171 VSIG10Q8N0Z9 540 aa32.32■■■□□ 2.76
LEMD3-203ENST00000541171 BRCA1P38398 1863 aaKnown RBP32.31■■■□□ 2.76
LEMD3-203ENST00000541171 NFIXQ14938 502 aa32.31■■■□□ 2.76
LEMD3-203ENST00000541171 NPC1L1Q9UHC9 1359 aa32.31■■■□□ 2.76
LEMD3-203ENST00000541171 COL3A1P02461 1466 aaPredicted RBP32.29■■■□□ 2.76
LEMD3-203ENST00000541171 TEFQ10587 303 aa32.29■■■□□ 2.76
LEMD3-203ENST00000541171 GAS2L2Q8NHY3 880 aa32.29■■■□□ 2.76
LEMD3-203ENST00000541171 GNAT3A8MTJ3 354 aa32.28■■■□□ 2.76
LEMD3-203ENST00000541171 IL17REQ8NFR9 667 aa32.28■■■□□ 2.76
LEMD3-203ENST00000541171 NMRK2Q9NPI5 230 aa32.28■■■□□ 2.76
LEMD3-203ENST00000541171 BCL2L12Q9HB09 334 aa32.27■■■□□ 2.76
LEMD3-203ENST00000541171 STARD3NLO95772 234 aa32.26■■■□□ 2.75
LEMD3-203ENST00000541171 SERPINB2P05120 415 aa32.25■■■□□ 2.75
LEMD3-203ENST00000541171 ZNF496Q96IT1 587 aaPredicted RBP32.25■■■□□ 2.75
LEMD3-203ENST00000541171 ARFGEF1Q9Y6D6 1849 aa32.25■■■□□ 2.75
LEMD3-203ENST00000541171 BICDL1Q6ZP65 573 aa32.24■■■□□ 2.75
LEMD3-203ENST00000541171 RNF181Q9P0P0 153 aa32.24■■■□□ 2.75
LEMD3-203ENST00000541171 ZNF790Q6PG37 636 aa32.23■■■□□ 2.75
LEMD3-203ENST00000541171 TOMM70O94826 608 aa32.22■■■□□ 2.75
LEMD3-203ENST00000541171 ZNF330Q9Y3S2 320 aaPredicted RBP32.22■■■□□ 2.75
LEMD3-203ENST00000541171 EIF5P55010 431 aaKnown RBP32.21■■■□□ 2.75
LEMD3-203ENST00000541171 CFAP53Q96M91 514 aa32.21■■■□□ 2.75
LEMD3-203ENST00000541171 UBR2Q8IWV8 1755 aa32.2■■■□□ 2.75
LEMD3-203ENST00000541171 A0A087WZG4 1122 aa32.2■■■□□ 2.75
LEMD3-203ENST00000541171 PHACTR3Q96KR7 559 aa32.2■■■□□ 2.75
LEMD3-203ENST00000541171 HEG1Q9ULI3 1381 aa32.19■■■□□ 2.74
LEMD3-203ENST00000541171 PRKAR2BP31323 418 aa32.19■■■□□ 2.74
LEMD3-203ENST00000541171 AFDNP55196 1824 aaKnown RBP32.19■■■□□ 2.74
LEMD3-203ENST00000541171 TEX13AQ9BXU3 409 aaPredicted RBP32.18■■■□□ 2.74
LEMD3-203ENST00000541171 C2CD5Q86YS7 1000 aa32.17■■■□□ 2.74
LEMD3-203ENST00000541171 TBC1D2BQ9UPU7 963 aa32.17■■■□□ 2.74
LEMD3-203ENST00000541171 RASSF7Q02833 373 aa32.16■■■□□ 2.74
LEMD3-203ENST00000541171 C16orf71Q8IYS4 520 aaPredicted RBP32.16■■■□□ 2.74
LEMD3-203ENST00000541171 FMNL2Q96PY5 1086 aa32.16■■■□□ 2.74
LEMD3-203ENST00000541171 RSPH6AQ9H0K4 717 aa32.15■■■□□ 2.74
LEMD3-203ENST00000541171 KCNQ3O43525 872 aa32.14■■■□□ 2.74
LEMD3-203ENST00000541171 APLP1P51693 650 aa32.14■■■□□ 2.74
LEMD3-203ENST00000541171 TBC1D9BQ66K14 1250 aa32.14■■■□□ 2.74
LEMD3-203ENST00000541171 NUDCQ9Y266 331 aa32.14■■■□□ 2.74
LEMD3-203ENST00000541171 KDM2BQ8NHM5 1336 aa32.14■■■□□ 2.74
LEMD3-203ENST00000541171 BTBD11A6QL63 1104 aa32.13■■■□□ 2.73
LEMD3-203ENST00000541171 H0YIN7 160 aa32.13■■■□□ 2.73
LEMD3-203ENST00000541171 A1BGP04217 495 aa32.13■■■□□ 2.73
LEMD3-203ENST00000541171 TTLL6Q8N841 843 aa32.13■■■□□ 2.73
LEMD3-203ENST00000541171 CARMIL3Q8ND23 1372 aa32.13■■■□□ 2.73
LEMD3-203ENST00000541171 NRXN2Q9P2S2 1712 aa32.13■■■□□ 2.73
LEMD3-203ENST00000541171 NPM2Q86SE8 214 aaKnown RBP32.12■■■□□ 2.73
LEMD3-203ENST00000541171 CEMIPQ8WUJ3 1361 aa32.11■■■□□ 2.73
LEMD3-203ENST00000541171 U2AF1L5P0DN76 240 aaPredicted RBP32.11■■■□□ 2.73
LEMD3-203ENST00000541171 U2AF1Q01081 240 aaKnown RBP eCLIP32.11■■■□□ 2.73
LEMD3-203ENST00000541171 RRAGCQ9HB90 399 aa32.11■■■□□ 2.73
LEMD3-203ENST00000541171 IL6STP40189 918 aaPredicted RBP32.1■■■□□ 2.73
LEMD3-203ENST00000541171 CCDC24Q8N4L8 307 aa32.1■■■□□ 2.73
LEMD3-203ENST00000541171 PPP2R1AP30153 589 aa32.09■■■□□ 2.73
LEMD3-203ENST00000541171 RBM46Q8TBY0 533 aaKnown RBP32.09■■■□□ 2.73
LEMD3-203ENST00000541171 SIPA1L3O60292 1781 aaPredicted RBP32.09■■■□□ 2.73
LEMD3-203ENST00000541171 RTF1Q92541 710 aaKnown RBP32.07■■■□□ 2.72
LEMD3-203ENST00000541171 ZNF622Q969S3 477 aaKnown RBP eCLIP32.07■■■□□ 2.722e-6■□□□□ 8.5
LEMD3-203ENST00000541171 SBF1O95248 1867 aa32.06■■■□□ 2.72
LEMD3-203ENST00000541171 MCM10Q7L590 875 aa32.06■■■□□ 2.72
LEMD3-203ENST00000541171 LMNB1P20700 586 aa32.05■■■□□ 2.72
LEMD3-203ENST00000541171 PIP4K2AP48426 406 aaPredicted RBP32.05■■■□□ 2.72
LEMD3-203ENST00000541171 ZNF219Q9P2Y4 722 aaPredicted RBP32.05■■■□□ 2.72
LEMD3-203ENST00000541171 USP16Q9Y5T5 823 aa32.05■■■□□ 2.72
LEMD3-203ENST00000541171 PRELPP51888 382 aa32.04■■■□□ 2.72
LEMD3-203ENST00000541171 PRR5LQ6MZQ0 368 aa32.04■■■□□ 2.72
LEMD3-203ENST00000541171 PRAMEF22A3QJZ6 481 aa32.03■■■□□ 2.72
LEMD3-203ENST00000541171 NPHP1O15259 732 aa32.03■■■□□ 2.72
LEMD3-203ENST00000541171 CAMTA2O94983 1202 aa32.03■■■□□ 2.72
LEMD3-203ENST00000541171 PDE6BP35913 854 aa32.03■■■□□ 2.72
LEMD3-203ENST00000541171 SETDB2Q96T68 719 aa32.03■■■□□ 2.72
LEMD3-203ENST00000541171 BRIP1Q9BX63 1249 aa32.03■■■□□ 2.72
LEMD3-203ENST00000541171 DLEC1Q9Y238 1755 aa32.02■■■□□ 2.72
LEMD3-203ENST00000541171 DCTN1Q14203 1278 aa32.02■■■□□ 2.72
LEMD3-203ENST00000541171 IFFO2Q5TF58 517 aa32.02■■■□□ 2.72
LEMD3-203ENST00000541171 DZIP3Q86Y13 1208 aaKnown RBP32.02■■■□□ 2.72
LEMD3-203ENST00000541171 SCN7AQ01118 1682 aa32.01■■■□□ 2.71
LEMD3-203ENST00000541171 NFKBIEO00221 500 aa32■■■□□ 2.71
LEMD3-203ENST00000541171 FSTL1Q12841 308 aa31.99■■■□□ 2.71
LEMD3-203ENST00000541171 DNAJC5GQ8N7S2 189 aa31.99■■■□□ 2.71
LEMD3-203ENST00000541171 CNBD1Q8NA66 436 aa31.99■■■□□ 2.71
LEMD3-203ENST00000541171 PDZRN3Q9UPQ7 1066 aa31.99■■■□□ 2.71
LEMD3-203ENST00000541171 ZC3H4Q9UPT8 1303 aaKnown RBP31.99■■■□□ 2.71
LEMD3-203ENST00000541171 C21orf2O43822 256 aa31.98■■■□□ 2.71
LEMD3-203ENST00000541171 SNRPA1P09661 255 aaKnown RBP31.98■■■□□ 2.71
LEMD3-203ENST00000541171 HTRA3P83110 453 aa31.98■■■□□ 2.71
LEMD3-203ENST00000541171 ANKRD31Q8N7Z5 1873 aa31.97■■■□□ 2.71
LEMD3-203ENST00000541171 GLTPD2A6NH11 291 aa31.96■■■□□ 2.71
LEMD3-203ENST00000541171 ST5P78524 1137 aa31.95■■■□□ 2.71
LEMD3-203ENST00000541171 TNRC6CQ9HCJ0 1690 aaKnown RBP31.94■■■□□ 2.7
LEMD3-203ENST00000541171 HTATSF1O43719 755 aaKnown RBP31.92■■■□□ 2.7
LEMD3-203ENST00000541171 SMC1BQ8NDV3 1235 aa31.92■■■□□ 2.7
LEMD3-203ENST00000541171 VEGFAP15692 232 aaPredicted RBP31.91■■■□□ 2.7
LEMD3-203ENST00000541171 MIS18AQ9NYP9 233 aa31.91■■■□□ 2.7
LEMD3-203ENST00000541171 NBPF5PQ86XG9 351 aaPredicted RBP31.9■■■□□ 2.7
LEMD3-203ENST00000541171 CNKSR1Q969H4 720 aa31.9■■■□□ 2.7
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms