RNA–Protein interactions for RNA: ENST00000540747.1

YBX3-209, Transcript of Y-box binding protein 3, humanhuman

TSL 5

Gene YBX3, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-209ENST00000540747 AMER1Q5JTC6 1135 aaPredicted RBP10.02□□□□□ -0.81
YBX3-209ENST00000540747 USPL1Q5W0Q7 1092 aa10.02□□□□□ -0.81
YBX3-209ENST00000540747 NARFQ9UHQ1 456 aa10.02□□□□□ -0.81
YBX3-209ENST00000540747 AFDNP55196 1824 aaKnown RBP10.02□□□□□ -0.81
YBX3-209ENST00000540747 KDM2BQ8NHM5 1336 aa10.02□□□□□ -0.81
YBX3-209ENST00000540747 COL15A1P39059 1388 aa10.01□□□□□ -0.81
YBX3-209ENST00000540747 UBR2Q8IWV8 1755 aa10.01□□□□□ -0.81
YBX3-209ENST00000540747 NFIXQ14938 502 aa10.01□□□□□ -0.81
YBX3-209ENST00000540747 MORC1Q86VD1 984 aa10.01□□□□□ -0.81
YBX3-209ENST00000540747 LGR6Q9HBX8 967 aa10.01□□□□□ -0.81
YBX3-209ENST00000540747 CARMIL3Q8ND23 1372 aa10.01□□□□□ -0.81
YBX3-209ENST00000540747 RNMTO43148 476 aaKnown RBP10□□□□□ -0.81
YBX3-209ENST00000540747 EIF4G2P78344 907 aaKnown RBP eCLIP10□□□□□ -0.81
YBX3-209ENST00000540747 RASSF7Q02833 373 aa10□□□□□ -0.81
YBX3-209ENST00000540747 VSIG10Q8N0Z9 540 aa10□□□□□ -0.81
YBX3-209ENST00000540747 POLR3GLQ9BT43 218 aa10□□□□□ -0.81
YBX3-209ENST00000540747 RRAGCQ9HB90 399 aa10□□□□□ -0.81
YBX3-209ENST00000540747 ZBTB1Q9Y2K1 713 aa10□□□□□ -0.81
YBX3-209ENST00000540747 NFKBIEO00221 500 aa9.99□□□□□ -0.81
YBX3-209ENST00000540747 ZPR1O75312 459 aa9.99□□□□□ -0.81
YBX3-209ENST00000540747 SLC39A6Q13433 755 aa9.99□□□□□ -0.81
YBX3-209ENST00000540747 COL13A1Q5TAT6 717 aaPredicted RBP9.99□□□□□ -0.81
YBX3-209ENST00000540747 COL3A1P02461 1466 aaPredicted RBP9.98□□□□□ -0.81
YBX3-209ENST00000540747 GLTPD2A6NH11 291 aa9.98□□□□□ -0.81
YBX3-209ENST00000540747 POTECB2RU33 542 aa9.98□□□□□ -0.81
YBX3-209ENST00000540747 LMNB1P20700 586 aa9.98□□□□□ -0.81
YBX3-209ENST00000540747 EIF5P55010 431 aaKnown RBP9.98□□□□□ -0.81
YBX3-209ENST00000540747 C16orf71Q8IYS4 520 aaPredicted RBP9.98□□□□□ -0.81
YBX3-209ENST00000540747 SMC1BQ8NDV3 1235 aa9.98□□□□□ -0.81
YBX3-209ENST00000540747 SCN7AQ01118 1682 aa9.97□□□□□ -0.81
YBX3-209ENST00000540747 TIAM2Q8IVF5 1701 aa9.97□□□□□ -0.81
YBX3-209ENST00000540747 SERPINB2P05120 415 aa9.97□□□□□ -0.81
YBX3-209ENST00000540747 MTHFSDQ2M296 383 aaKnown RBP9.97□□□□□ -0.81
YBX3-209ENST00000540747 TTLL6Q8N841 843 aa9.97□□□□□ -0.81
YBX3-209ENST00000540747 VIRMAQ69YN4 1812 aaKnown RBP9.97□□□□□ -0.81
YBX3-209ENST00000540747 ANKRD31Q8N7Z5 1873 aa9.97□□□□□ -0.81
YBX3-209ENST00000540747 COL11A2P13942 1736 aaPredicted RBP9.96□□□□□ -0.81
YBX3-209ENST00000540747 PER1O15534 1290 aaPredicted RBP9.96□□□□□ -0.82
YBX3-209ENST00000540747 VEGFAP15692 232 aaPredicted RBP9.96□□□□□ -0.82
YBX3-209ENST00000540747 KNSTRNQ9Y448 316 aa9.96□□□□□ -0.82
YBX3-209ENST00000540747 HMOX1P09601 288 aa9.95□□□□□ -0.82
YBX3-209ENST00000540747 C2CD5Q86YS7 1000 aa9.95□□□□□ -0.82
YBX3-209ENST00000540747 SIPA1L3O60292 1781 aaPredicted RBP9.95□□□□□ -0.82
YBX3-209ENST00000540747 FER1L6Q2WGJ9 1857 aa9.94□□□□□ -0.82
YBX3-209ENST00000540747 HEG1Q9ULI3 1381 aa9.94□□□□□ -0.82
YBX3-209ENST00000540747 KIF7Q2M1P5 1343 aa9.94□□□□□ -0.82
YBX3-209ENST00000540747 LTBP3Q9NS15 1303 aa9.94□□□□□ -0.82
YBX3-209ENST00000540747 ZNF496Q96IT1 587 aaPredicted RBP9.94□□□□□ -0.82
YBX3-209ENST00000540747 CEMIPQ8WUJ3 1361 aa9.93□□□□□ -0.82
YBX3-209ENST00000540747 NPC1L1Q9UHC9 1359 aa9.93□□□□□ -0.82
YBX3-209ENST00000540747 H0YIN7 160 aa9.93□□□□□ -0.82
YBX3-209ENST00000540747 CANXP27824 592 aaKnown RBP9.93□□□□□ -0.82
YBX3-209ENST00000540747 TBC1D9BQ66K14 1250 aa9.93□□□□□ -0.82
YBX3-209ENST00000540747 PRR5LQ6MZQ0 368 aa9.93□□□□□ -0.82
YBX3-209ENST00000540747 IL17REQ8NFR9 667 aa9.93□□□□□ -0.82
YBX3-209ENST00000540747 BRIP1Q9BX63 1249 aa9.93□□□□□ -0.82
YBX3-209ENST00000540747 PDZRN3Q9UPQ7 1066 aa9.93□□□□□ -0.82
YBX3-209ENST00000540747 DICER1Q9UPY3 1922 aaKnown RBP9.93□□□□□ -0.82
YBX3-209ENST00000540747 A0A087WZG4 1122 aa9.92□□□□□ -0.82
YBX3-209ENST00000540747 DIAPH1O60610 1272 aaKnown RBP9.92□□□□□ -0.82
YBX3-209ENST00000540747 CAMTA2O94983 1202 aa9.92□□□□□ -0.82
YBX3-209ENST00000540747 STARD3NLO95772 234 aa9.92□□□□□ -0.82
YBX3-209ENST00000540747 IL6STP40189 918 aaPredicted RBP9.92□□□□□ -0.82
YBX3-209ENST00000540747 ZNF790Q6PG37 636 aa9.92□□□□□ -0.82
YBX3-209ENST00000540747 CCDC88AQ3V6T2 1871 aa9.91□□□□□ -0.82
YBX3-209ENST00000540747 BCORQ6W2J9 1755 aa9.91□□□□□ -0.82
YBX3-209ENST00000540747 HSPA1AP0DMV8 641 aaKnown RBP9.91□□□□□ -0.82
YBX3-209ENST00000540747 HSPA1BP0DMV9 641 aaKnown RBP9.91□□□□□ -0.82
YBX3-209ENST00000540747 ARFGEF2Q9Y6D5 1785 aa9.91□□□□□ -0.82
YBX3-209ENST00000540747 C21orf2O43822 256 aa9.9□□□□□ -0.82
YBX3-209ENST00000540747 SRGNP10124 158 aa9.9□□□□□ -0.82
YBX3-209ENST00000540747 PDE6BP35913 854 aa9.9□□□□□ -0.82
YBX3-209ENST00000540747 BICDL1Q6ZP65 573 aa9.9□□□□□ -0.82
YBX3-209ENST00000540747 TNS4Q8IZW8 715 aa9.9□□□□□ -0.82
YBX3-209ENST00000540747 C7orf43Q8WVR3 580 aa9.9□□□□□ -0.82
YBX3-209ENST00000540747 TEX13AQ9BXU3 409 aaPredicted RBP9.9□□□□□ -0.82
YBX3-209ENST00000540747 SLX4Q8IY92 1834 aa9.9□□□□□ -0.82
YBX3-209ENST00000540747 KLRG2A4D1S0 409 aaPredicted RBP9.89□□□□□ -0.83
YBX3-209ENST00000540747 GNAT3A8MTJ3 354 aa9.89□□□□□ -0.83
YBX3-209ENST00000540747 POTEIP0CG38 1075 aa9.89□□□□□ -0.83
YBX3-209ENST00000540747 POTEJP0CG39 1038 aa9.89□□□□□ -0.83
YBX3-209ENST00000540747 ERFEQ4G0M1 354 aa9.89□□□□□ -0.83
YBX3-209ENST00000540747 STYK1Q6J9G0 422 aa9.89□□□□□ -0.83
YBX3-209ENST00000540747 TTC5Q8N0Z6 440 aa9.89□□□□□ -0.83
YBX3-209ENST00000540747 CCDC24Q8N4L8 307 aa9.89□□□□□ -0.83
YBX3-209ENST00000540747 L3MBTL3Q96JM7 780 aaPredicted RBP9.89□□□□□ -0.83
YBX3-209ENST00000540747 PCGF6Q9BYE7 350 aa9.89□□□□□ -0.83
YBX3-209ENST00000540747 TBC1D2BQ9UPU7 963 aa9.89□□□□□ -0.83
YBX3-209ENST00000540747 SNED1Q8TER0 1413 aa9.89□□□□□ -0.83
YBX3-209ENST00000540747 PASKQ96RG2 1323 aa9.88□□□□□ -0.83
YBX3-209ENST00000540747 KCNQ3O43525 872 aa9.88□□□□□ -0.83
YBX3-209ENST00000540747 A1BGP04217 495 aa9.88□□□□□ -0.83
YBX3-209ENST00000540747 CHADLQ6NUI6 762 aa9.88□□□□□ -0.83
YBX3-209ENST00000540747 DPY19L2Q6NUT2 758 aa9.88□□□□□ -0.83
YBX3-209ENST00000540747 PRPF40BQ6NWY9 871 aaKnown RBP9.88□□□□□ -0.83
YBX3-209ENST00000540747 CNBD1Q8NA66 436 aa9.88□□□□□ -0.83
YBX3-209ENST00000540747 GAS2L2Q8NHY3 880 aa9.88□□□□□ -0.83
YBX3-209ENST00000540747 ZNF622Q969S3 477 aaKnown RBP eCLIP9.88□□□□□ -0.83
YBX3-209ENST00000540747 FMNL2Q96PY5 1086 aa9.88□□□□□ -0.83
YBX3-209ENST00000540747 TAOK3Q9H2K8 898 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms