RNA–Protein interactions for RNA: ENST00000540627.5

KPNB1-203, Transcript of karyopherin subunit beta 1, humanhuman

TSL 2 BASIC

Gene KPNB1, Length 2,989 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNB1-203ENST00000540627 LMBRD1Q9NUN5 540 aa8.85□□□□□ -0.99
KPNB1-203ENST00000540627 EXOC6BQ9Y2D4 811 aa8.85□□□□□ -0.99
KPNB1-203ENST00000540627 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.85□□□□□ -0.99
KPNB1-203ENST00000540627 ERBB4Q15303 1308 aa8.85□□□□□ -0.99
KPNB1-203ENST00000540627 MCCP23508 829 aa8.85□□□□□ -0.99
KPNB1-203ENST00000540627 NEK4P51957 841 aa8.85□□□□□ -0.99
KPNB1-203ENST00000540627 ZNF445P59923 1031 aa8.85□□□□□ -0.99
KPNB1-203ENST00000540627 FKBP5Q13451 457 aaPredicted RBP8.85□□□□□ -0.99
KPNB1-203ENST00000540627 CCDC30Q5VVM6 783 aa8.85□□□□□ -0.99
KPNB1-203ENST00000540627 NALCNQ8IZF0 1738 aa8.84□□□□□ -0.99
KPNB1-203ENST00000540627 TOPAZ1Q8N9V7 1692 aa8.84□□□□□ -0.99
KPNB1-203ENST00000540627 NGDNQ8NEJ9 315 aaKnown RBP8.84□□□□□ -0.99
KPNB1-203ENST00000540627 PPP1R9BQ96SB3 815 aa8.84□□□□□ -0.99
KPNB1-203ENST00000540627 SGIP1Q9BQI5 828 aa8.84□□□□□ -0.99
KPNB1-203ENST00000540627 KDRP35968 1356 aa8.84□□□□□ -0.99
KPNB1-203ENST00000540627 PLEKHG1Q9ULL1 1385 aa8.84□□□□□ -0.99
KPNB1-203ENST00000540627 PRPF40AO75400 957 aaKnown RBP8.84□□□□□ -0.99
KPNB1-203ENST00000540627 MX1P20591 662 aa8.84□□□□□ -0.99
KPNB1-203ENST00000540627 MCM2P49736 904 aa8.84□□□□□ -0.99
KPNB1-203ENST00000540627 FAM177A1Q8N128 213 aaPredicted RBP8.84□□□□□ -0.99
KPNB1-203ENST00000540627 EYA1Q99502 592 aa8.84□□□□□ -0.99
KPNB1-203ENST00000540627 SERPINA10Q9UK55 444 aa8.84□□□□□ -0.99
KPNB1-203ENST00000540627 HTATSF1O43719 755 aaKnown RBP8.83□□□□□ -1
KPNB1-203ENST00000540627 ZSCAN23Q3MJ62 389 aa8.83□□□□□ -1
KPNB1-203ENST00000540627 PROSER2Q86WR7 435 aaPredicted RBP8.83□□□□□ -1
KPNB1-203ENST00000540627 SLC26A8Q96RN1 970 aa8.83□□□□□ -1
KPNB1-203ENST00000540627 UBR1Q8IWV7 1749 aa8.83□□□□□ -1
KPNB1-203ENST00000540627 SSH2Q76I76 1423 aa8.83□□□□□ -1
KPNB1-203ENST00000540627 IGSF1Q8N6C5 1336 aa8.83□□□□□ -1
KPNB1-203ENST00000540627 LTKP29376 864 aa8.83□□□□□ -1
KPNB1-203ENST00000540627 MCM6Q14566 821 aa8.83□□□□□ -1
KPNB1-203ENST00000540627 TSHZ3Q63HK5 1081 aa8.83□□□□□ -1
KPNB1-203ENST00000540627 ESYT1Q9BSJ8 1104 aa8.83□□□□□ -1
KPNB1-203ENST00000540627 GNAT3A8MTJ3 354 aa8.82□□□□□ -1
KPNB1-203ENST00000540627 TRIM6-TRIM34B2RNG4 842 aa8.82□□□□□ -1
KPNB1-203ENST00000540627 ATP8B2P98198 1209 aa8.82□□□□□ -1
KPNB1-203ENST00000540627 POM121Q96HA1 1249 aa8.82□□□□□ -1
KPNB1-203ENST00000540627 EID1Q9Y6B2 187 aa8.82□□□□□ -1
KPNB1-203ENST00000540627 RILPL2Q969X0 211 aa8.82□□□□□ -1
KPNB1-203ENST00000540627 TMX3Q96JJ7 454 aa8.82□□□□□ -1
KPNB1-203ENST00000540627 SRCIN1Q9C0H9 1055 aa8.82□□□□□ -1
KPNB1-203ENST00000540627 ANO2Q9NQ90 1003 aa8.82□□□□□ -1
KPNB1-203ENST00000540627 ZDHHC9Q9Y397 364 aa8.82□□□□□ -1
KPNB1-203ENST00000540627 PNMA6EA0A0J9YXQ4 647 aa8.82□□□□□ -1
KPNB1-203ENST00000540627 ANAPC15P60006 121 aa8.82□□□□□ -1
KPNB1-203ENST00000540627 AMOTL2Q9Y2J4 779 aa8.82□□□□□ -1
KPNB1-203ENST00000540627 SOS1Q07889 1333 aaPredicted RBP8.81□□□□□ -1
KPNB1-203ENST00000540627 SALL3Q9BXA9 1300 aa8.81□□□□□ -1
KPNB1-203ENST00000540627 FMN2Q9NZ56 1722 aa8.81□□□□□ -1
KPNB1-203ENST00000540627 ZSCAN30Q86W11 494 aa8.81□□□□□ -1
KPNB1-203ENST00000540627 SSUH2Q9Y2M2 353 aa8.81□□□□□ -1
KPNB1-203ENST00000540627 ADAMTSL3P82987 1691 aa8.81□□□□□ -1
KPNB1-203ENST00000540627 RIMS1Q86UR5 1692 aaKnown RBP8.81□□□□□ -1
KPNB1-203ENST00000540627 CHMLP26374 656 aa8.81□□□□□ -1
KPNB1-203ENST00000540627 NLRP6P59044 892 aa8.81□□□□□ -1
KPNB1-203ENST00000540627 LRRFIP2Q9Y608 721 aaKnown RBP8.81□□□□□ -1
KPNB1-203ENST00000540627 UBTFL1P0CB47 393 aaPredicted RBP8.8□□□□□ -1
KPNB1-203ENST00000540627 MSNP26038 577 aaKnown RBP8.8□□□□□ -1
KPNB1-203ENST00000540627 MLLT3P42568 568 aaPredicted RBP8.8□□□□□ -1
KPNB1-203ENST00000540627 GPT2Q8TD30 523 aa8.8□□□□□ -1
KPNB1-203ENST00000540627 STAP2Q9UGK3 403 aa8.8□□□□□ -1
KPNB1-203ENST00000540627 CEP170BQ9Y4F5 1589 aaPredicted RBP8.8□□□□□ -1
KPNB1-203ENST00000540627 PTPRUQ92729 1446 aa8.8□□□□□ -1
KPNB1-203ENST00000540627 MBD3O95983 291 aa8.8□□□□□ -1
KPNB1-203ENST00000540627 PRIM1P49642 420 aaKnown RBP8.79□□□□□ -1
KPNB1-203ENST00000540627 TAF7Q15545 349 aaPredicted RBP8.79□□□□□ -1
KPNB1-203ENST00000540627 INTS4Q96HW7 963 aaKnown RBP8.79□□□□□ -1
KPNB1-203ENST00000540627 RBSNQ9H1K0 784 aa8.79□□□□□ -1
KPNB1-203ENST00000540627 BABAM1Q9NWV8 329 aa8.79□□□□□ -1
KPNB1-203ENST00000540627 MAP3K5Q99683 1374 aa8.79□□□□□ -1
KPNB1-203ENST00000540627 CUL4AQ13619 759 aa8.79□□□□□ -1
KPNB1-203ENST00000540627 NOL8Q76FK4 1167 aaKnown RBP8.79□□□□□ -1
KPNB1-203ENST00000540627 RBM27Q9P2N5 1060 aaKnown RBP8.79□□□□□ -1
KPNB1-203ENST00000540627 PALD1Q9ULE6 856 aa8.79□□□□□ -1
KPNB1-203ENST00000540627 AOX1Q06278 1338 aa8.79□□□□□ -1
KPNB1-203ENST00000540627 BRD1O95696 1058 aa8.79□□□□□ -1
KPNB1-203ENST00000540627 HS1BP3Q53T59 392 aa8.79□□□□□ -1
KPNB1-203ENST00000540627 IL17REQ8NFR9 667 aa8.79□□□□□ -1
KPNB1-203ENST00000540627 USP44Q9H0E7 712 aa8.79□□□□□ -1
KPNB1-203ENST00000540627 TBX22Q9Y458 520 aa8.79□□□□□ -1
KPNB1-203ENST00000540627 HOXC9P31274 260 aa8.78□□□□□ -1
KPNB1-203ENST00000540627 HDGFL1Q5TGJ6 251 aa8.78□□□□□ -1
KPNB1-203ENST00000540627 IL1RAPL2Q9NP60 686 aa8.78□□□□□ -1
KPNB1-203ENST00000540627 SYCE3A1L190 88 aa8.78□□□□□ -1
KPNB1-203ENST00000540627 NUTM2GQ5VZR2 741 aa8.78□□□□□ -1
KPNB1-203ENST00000540627 LRSAM1Q6UWE0 723 aa8.78□□□□□ -1
KPNB1-203ENST00000540627 LTV1Q96GA3 475 aaPredicted RBP8.78□□□□□ -1
KPNB1-203ENST00000540627 CHAMP1Q96JM3 812 aa8.78□□□□□ -1
KPNB1-203ENST00000540627 TMEM63CQ9P1W3 806 aa8.78□□□□□ -1
KPNB1-203ENST00000540627 CACNA1FO60840 1977 aa8.77□□□□□ -1
KPNB1-203ENST00000540627 EPB41L2O43491 1005 aaKnown RBP8.77□□□□□ -1.01
KPNB1-203ENST00000540627 RAB11FIP3O75154 756 aa8.77□□□□□ -1.01
KPNB1-203ENST00000540627 SURF6O75683 361 aaKnown RBP8.77□□□□□ -1.01
KPNB1-203ENST00000540627 UNC5CLQ8IV45 518 aa8.77□□□□□ -1.01
KPNB1-203ENST00000540627 FNBP4Q8N3X1 1017 aaPredicted RBP8.77□□□□□ -1.01
KPNB1-203ENST00000540627 SSH3Q8TE77 659 aa8.77□□□□□ -1.01
KPNB1-203ENST00000540627 UBE2Q2Q8WVN8 375 aa8.77□□□□□ -1.01
KPNB1-203ENST00000540627 UPF3BQ9BZI7 483 aaKnown RBP8.77□□□□□ -1.01
KPNB1-203ENST00000540627 PXDNLA1KZ92 1463 aa8.77□□□□□ -1.01
KPNB1-203ENST00000540627 FAM208AQ9UK61 1670 aaKnown RBP8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms