RNA–Protein interactions for RNA: ENST00000540537.5

CHFR-217, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 913 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-217ENST00000540537 TEX13AQ9BXU3 409 aaPredicted RBP27.93■■■□□ 2.06
CHFR-217ENST00000540537 N4BP2Q86UW6 1770 aaPredicted RBP27.91■■■□□ 2.06
CHFR-217ENST00000540537 BTBD11A6QL63 1104 aa27.91■■■□□ 2.06
CHFR-217ENST00000540537 HTATSF1O43719 755 aaKnown RBP27.91■■■□□ 2.06
CHFR-217ENST00000540537 USPL1Q5W0Q7 1092 aa27.91■■■□□ 2.06
CHFR-217ENST00000540537 FMNL2Q96PY5 1086 aa27.91■■■□□ 2.06
CHFR-217ENST00000540537 NARFQ9UHQ1 456 aa27.91■■■□□ 2.06
CHFR-217ENST00000540537 DDR1Q08345 913 aa27.9■■■□□ 2.06
CHFR-217ENST00000540537 RALBP1Q15311 655 aa27.89■■■□□ 2.06
CHFR-217ENST00000540537 MCM10Q7L590 875 aa27.89■■■□□ 2.06
CHFR-217ENST00000540537 WWC3Q9ULE0 1092 aa27.89■■■□□ 2.06
CHFR-217ENST00000540537 NEFMP07197 916 aa27.88■■■□□ 2.05
CHFR-217ENST00000540537 CANXP27824 592 aaKnown RBP27.88■■■□□ 2.05
CHFR-217ENST00000540537 TM4SF1P30408 202 aa27.88■■■□□ 2.05
CHFR-217ENST00000540537 POLRMTO00411 1230 aaKnown RBP27.87■■■□□ 2.05
CHFR-217ENST00000540537 EIF5P55010 431 aaKnown RBP27.87■■■□□ 2.05
CHFR-217ENST00000540537 A0A087WZG4 1122 aa27.86■■■□□ 2.05
CHFR-217ENST00000540537 A0A0G2JLW4 131 aa27.86■■■□□ 2.05
CHFR-217ENST00000540537 KCNQ3O43525 872 aa27.86■■■□□ 2.05
CHFR-217ENST00000540537 BRCA1P38398 1863 aaKnown RBP27.85■■■□□ 2.05
CHFR-217ENST00000540537 DPEP1P16444 411 aa27.84■■■□□ 2.05
CHFR-217ENST00000540537 DCTN1Q14203 1278 aa27.84■■■□□ 2.05
CHFR-217ENST00000540537 PLEKHF1Q96S99 279 aa27.84■■■□□ 2.05
CHFR-217ENST00000540537 BCL2L12Q9HB09 334 aa27.84■■■□□ 2.05
CHFR-217ENST00000540537 DLG5Q8TDM6 1919 aa27.84■■■□□ 2.05
CHFR-217ENST00000540537 DDX10Q13206 875 aaKnown RBP27.83■■■□□ 2.05
CHFR-217ENST00000540537 IL6STP40189 918 aaPredicted RBP27.82■■■□□ 2.04
CHFR-217ENST00000540537 NFIXQ14938 502 aa27.82■■■□□ 2.04
CHFR-217ENST00000540537 PNNQ9H307 717 aaKnown RBP27.82■■■□□ 2.04
CHFR-217ENST00000540537 AFDNP55196 1824 aaKnown RBP27.81■■■□□ 2.04
CHFR-217ENST00000540537 BCS1LQ9Y276 419 aa27.81■■■□□ 2.04
CHFR-217ENST00000540537 NRXN2Q9P2S2 1712 aa27.81■■■□□ 2.04
CHFR-217ENST00000540537 ADCY9O60503 1353 aa27.8■■■□□ 2.04
CHFR-217ENST00000540537 SCN7AQ01118 1682 aa27.79■■■□□ 2.04
CHFR-217ENST00000540537 KCNA3P22001 575 aa27.79■■■□□ 2.04
CHFR-217ENST00000540537 TAF7Q15545 349 aaPredicted RBP27.79■■■□□ 2.04
CHFR-217ENST00000540537 A1BGP04217 495 aa27.78■■■□□ 2.04
CHFR-217ENST00000540537 SNRPA1P09661 255 aaKnown RBP27.78■■■□□ 2.04
CHFR-217ENST00000540537 NFE2L2Q16236 605 aa27.78■■■□□ 2.04
CHFR-217ENST00000540537 ATP10DQ9P241 1426 aa27.77■■■□□ 2.04
CHFR-217ENST00000540537 ARFGEF1Q9Y6D6 1849 aa27.77■■■□□ 2.04
CHFR-217ENST00000540537 ZNF330Q9Y3S2 320 aaPredicted RBP27.77■■■□□ 2.04
CHFR-217ENST00000540537 USP16Q9Y5T5 823 aa27.77■■■□□ 2.04
CHFR-217ENST00000540537 MAPK8IP3Q9UPT6 1336 aa27.76■■■□□ 2.03
CHFR-217ENST00000540537 NPM2Q86SE8 214 aaKnown RBP27.76■■■□□ 2.03
CHFR-217ENST00000540537 PIM2Q9P1W9 311 aa27.76■■■□□ 2.03
CHFR-217ENST00000540537 MYBBP1AQ9BQG0 1328 aaKnown RBP27.75■■■□□ 2.03
CHFR-217ENST00000540537 SERPINB2P05120 415 aa27.75■■■□□ 2.03
CHFR-217ENST00000540537 PNISRQ8TF01 805 aaKnown RBP27.74■■■□□ 2.03
CHFR-217ENST00000540537 TBC1D2BQ9UPU7 963 aa27.74■■■□□ 2.03
CHFR-217ENST00000540537 PRAMEF22A3QJZ6 481 aa27.73■■■□□ 2.03
CHFR-217ENST00000540537 GIGYF1O75420 1035 aaPredicted RBP27.72■■■□□ 2.03
CHFR-217ENST00000540537 CHRNA5P30532 468 aa27.72■■■□□ 2.03
CHFR-217ENST00000540537 DALRD3Q5D0E6 543 aaKnown RBP27.72■■■□□ 2.03
CHFR-217ENST00000540537 KDM3BQ7LBC6 1761 aa27.72■■■□□ 2.03
CHFR-217ENST00000540537 BCORQ6W2J9 1755 aa27.71■■■□□ 2.03
CHFR-217ENST00000540537 TBC1D9BQ66K14 1250 aa27.71■■■□□ 2.03
CHFR-217ENST00000540537 BICDL1Q6ZP65 573 aa27.71■■■□□ 2.03
CHFR-217ENST00000540537 CAMTA2O94983 1202 aa27.7■■■□□ 2.02
CHFR-217ENST00000540537 MIS18AQ9NYP9 233 aa27.7■■■□□ 2.02
CHFR-217ENST00000540537 LAMB4A4D0S4 1761 aa27.69■■■□□ 2.02
CHFR-217ENST00000540537 C1QTNF8P60827 252 aa27.69■■■□□ 2.02
CHFR-217ENST00000540537 ARHGAP27Q6ZUM4 889 aa27.69■■■□□ 2.02
CHFR-217ENST00000540537 DZIP3Q86Y13 1208 aaKnown RBP27.69■■■□□ 2.02
CHFR-217ENST00000540537 CARMIL3Q8ND23 1372 aa27.68■■■□□ 2.02
CHFR-217ENST00000540537 DLEC1Q9Y238 1755 aa27.68■■■□□ 2.02
CHFR-217ENST00000540537 PIP4K2AP48426 406 aaPredicted RBP27.67■■■□□ 2.02
CHFR-217ENST00000540537 THUMPD2Q9BTF0 503 aaKnown RBP27.67■■■□□ 2.02
CHFR-217ENST00000540537 GPBP1L1Q9HC44 474 aaPredicted RBP27.66■■■□□ 2.02
CHFR-217ENST00000540537 NBPF26B4DH59 902 aa27.65■■■□□ 2.02
CHFR-217ENST00000540537 NBPF10Q6P3W6 841 aaKnown RBP27.65■■■□□ 2.02
CHFR-217ENST00000540537 NBPF15Q8N660 670 aa27.65■■■□□ 2.02
CHFR-217ENST00000540537 CLEC4GQ6UXB4 293 aa27.64■■■□□ 2.02
CHFR-217ENST00000540537 SETDB2Q96T68 719 aa27.64■■■□□ 2.02
CHFR-217ENST00000540537 RIPK4P57078 832 aa27.63■■■□□ 2.01
CHFR-217ENST00000540537 EIF4A1P60842 406 aaKnown RBP27.63■■■□□ 2.01
CHFR-217ENST00000540537 ANKRD31Q8N7Z5 1873 aa27.63■■■□□ 2.01
CHFR-217ENST00000540537 RGL2O15211 777 aa27.62■■■□□ 2.01
CHFR-217ENST00000540537 PRR5LQ6MZQ0 368 aa27.62■■■□□ 2.01
CHFR-217ENST00000540537 C2CD5Q86YS7 1000 aa27.62■■■□□ 2.01
CHFR-217ENST00000540537 H0YIN7 160 aa27.61■■■□□ 2.01
CHFR-217ENST00000540537 TMPOP42166 694 aaKnown RBP27.61■■■□□ 2.01
CHFR-217ENST00000540537 LMOD3Q0VAK6 560 aa27.61■■■□□ 2.01
CHFR-217ENST00000540537 BRIP1Q9BX63 1249 aa27.61■■■□□ 2.01
CHFR-217ENST00000540537 PDZRN3Q9UPQ7 1066 aa27.61■■■□□ 2.01
CHFR-217ENST00000540537 ZNF652Q9Y2D9 606 aa27.61■■■□□ 2.01
CHFR-217ENST00000540537 ZNF526Q8TF50 670 aaPredicted RBP27.6■■■□□ 2.01
CHFR-217ENST00000540537 PRKRIP1Q9H875 184 aaPredicted RBP27.6■■■□□ 2.01
CHFR-217ENST00000540537 PDE6BP35913 854 aa27.59■■■□□ 2.01
CHFR-217ENST00000540537 WDR43Q15061 677 aaKnown RBP eCLIP27.59■■■□□ 2.01
CHFR-217ENST00000540537 TTLL6Q8N841 843 aa27.59■■■□□ 2.01
CHFR-217ENST00000540537 CNBD1Q8NA66 436 aa27.59■■■□□ 2.01
CHFR-217ENST00000540537 BABAM1Q9NWV8 329 aa27.58■■■□□ 2.01
CHFR-217ENST00000540537 C9orf131Q5VYM1 1079 aa27.57■■■□□ 2
CHFR-217ENST00000540537 TSPYL4Q9UJ04 414 aa27.57■■■□□ 2
CHFR-217ENST00000540537 ZEB1P37275 1124 aaPredicted RBP27.56■■■□□ 2
CHFR-217ENST00000540537 ST5P78524 1137 aa27.56■■■□□ 2
CHFR-217ENST00000540537 RUNDC1Q96C34 613 aa27.56■■■□□ 2
CHFR-217ENST00000540537 SBF1O95248 1867 aa27.55■■■□□ 2
CHFR-217ENST00000540537 NPHP1O15259 732 aa27.55■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 1781.6 ms