RNA–Protein interactions for RNA: ENST00000540209.5

RAP1B-221, Transcript of RAP1B, member of RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAP1B, Length 1,264 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1B-221ENST00000540209 HTATSF1O43719 755 aaKnown RBP25.78■■□□□ 1.72
RAP1B-221ENST00000540209 PLEKHF1Q96S99 279 aa25.78■■□□□ 1.72
RAP1B-221ENST00000540209 N4BP2Q86UW6 1770 aaPredicted RBP25.77■■□□□ 1.72
RAP1B-221ENST00000540209 FKBP8Q14318 412 aa25.76■■□□□ 1.71
RAP1B-221ENST00000540209 FMNL2Q96PY5 1086 aa25.76■■□□□ 1.71
RAP1B-221ENST00000540209 PXDNLA1KZ92 1463 aa25.76■■□□□ 1.71
RAP1B-221ENST00000540209 KCNQ3O43525 872 aa25.75■■□□□ 1.71
RAP1B-221ENST00000540209 STARD3NLO95772 234 aa25.75■■□□□ 1.71
RAP1B-221ENST00000540209 DCTN1Q14203 1278 aa25.75■■□□□ 1.71
RAP1B-221ENST00000540209 TEX13AQ9BXU3 409 aaPredicted RBP25.75■■□□□ 1.71
RAP1B-221ENST00000540209 MYBBP1AQ9BQG0 1328 aaKnown RBP25.74■■□□□ 1.71
RAP1B-221ENST00000540209 GRIN3BO60391 1043 aa25.74■■□□□ 1.71
RAP1B-221ENST00000540209 NEFMP07197 916 aa25.74■■□□□ 1.71
RAP1B-221ENST00000540209 PARP3Q9Y6F1 533 aa25.74■■□□□ 1.71
RAP1B-221ENST00000540209 BRCA1P38398 1863 aaKnown RBP25.74■■□□□ 1.71
RAP1B-221ENST00000540209 ZPR1O75312 459 aa25.73■■□□□ 1.71
RAP1B-221ENST00000540209 USPL1Q5W0Q7 1092 aa25.73■■□□□ 1.71
RAP1B-221ENST00000540209 NARFQ9UHQ1 456 aa25.73■■□□□ 1.71
RAP1B-221ENST00000540209 SCN7AQ01118 1682 aa25.73■■□□□ 1.71
RAP1B-221ENST00000540209 KDM3BQ7LBC6 1761 aa25.72■■□□□ 1.71
RAP1B-221ENST00000540209 CANXP27824 592 aaKnown RBP25.72■■□□□ 1.71
RAP1B-221ENST00000540209 AFDNP55196 1824 aaKnown RBP25.72■■□□□ 1.71
RAP1B-221ENST00000540209 EIF5P55010 431 aaKnown RBP25.71■■□□□ 1.71
RAP1B-221ENST00000540209 DDR1Q08345 913 aa25.71■■□□□ 1.71
RAP1B-221ENST00000540209 PNNQ9H307 717 aaKnown RBP25.71■■□□□ 1.71
RAP1B-221ENST00000540209 NRXN2Q9P2S2 1712 aa25.71■■□□□ 1.71
RAP1B-221ENST00000540209 TM4SF1P30408 202 aa25.7■■□□□ 1.7
RAP1B-221ENST00000540209 TGFB2P61812 414 aa25.7■■□□□ 1.7
RAP1B-221ENST00000540209 NFE2L2Q16236 605 aa25.69■■□□□ 1.7
RAP1B-221ENST00000540209 MAPK8IP3Q9UPT6 1336 aa25.68■■□□□ 1.7
RAP1B-221ENST00000540209 POLRMTO00411 1230 aaKnown RBP25.68■■□□□ 1.7
RAP1B-221ENST00000540209 BCL2L12Q9HB09 334 aa25.68■■□□□ 1.7
RAP1B-221ENST00000540209 LAMB4A4D0S4 1761 aa25.68■■□□□ 1.7
RAP1B-221ENST00000540209 BCORQ6W2J9 1755 aa25.67■■□□□ 1.7
RAP1B-221ENST00000540209 TAF7Q15545 349 aaPredicted RBP25.67■■□□□ 1.7
RAP1B-221ENST00000540209 ZEB1P37275 1124 aaPredicted RBP25.66■■□□□ 1.7
RAP1B-221ENST00000540209 IL6STP40189 918 aaPredicted RBP25.66■■□□□ 1.7
RAP1B-221ENST00000540209 WWC3Q9ULE0 1092 aa25.66■■□□□ 1.7
RAP1B-221ENST00000540209 A1BGP04217 495 aa25.65■■□□□ 1.7
RAP1B-221ENST00000540209 USP16Q9Y5T5 823 aa25.65■■□□□ 1.7
RAP1B-221ENST00000540209 A0A087WZG4 1122 aa25.64■■□□□ 1.7
RAP1B-221ENST00000540209 A0A0G2JLW4 131 aa25.64■■□□□ 1.7
RAP1B-221ENST00000540209 PRAMEF22A3QJZ6 481 aa25.64■■□□□ 1.7
RAP1B-221ENST00000540209 SNRPA1P09661 255 aaKnown RBP25.64■■□□□ 1.7
RAP1B-221ENST00000540209 NFIXQ14938 502 aa25.64■■□□□ 1.7
RAP1B-221ENST00000540209 PRKRIP1Q9H875 184 aaPredicted RBP25.63■■□□□ 1.69
RAP1B-221ENST00000540209 ARFGEF1Q9Y6D6 1849 aa25.63■■□□□ 1.69
RAP1B-221ENST00000540209 DPEP1P16444 411 aa25.62■■□□□ 1.69
RAP1B-221ENST00000540209 PNISRQ8TF01 805 aaKnown RBP25.61■■□□□ 1.69
RAP1B-221ENST00000540209 THUMPD2Q9BTF0 503 aaKnown RBP25.61■■□□□ 1.69
RAP1B-221ENST00000540209 MIS18AQ9NYP9 233 aa25.61■■□□□ 1.69
RAP1B-221ENST00000540209 DLEC1Q9Y238 1755 aa25.6■■□□□ 1.69
RAP1B-221ENST00000540209 GIGYF1O75420 1035 aaPredicted RBP25.6■■□□□ 1.69
RAP1B-221ENST00000540209 KCNA3P22001 575 aa25.6■■□□□ 1.69
RAP1B-221ENST00000540209 ZNF330Q9Y3S2 320 aaPredicted RBP25.6■■□□□ 1.69
RAP1B-221ENST00000540209 TBC1D2BQ9UPU7 963 aa25.59■■□□□ 1.69
RAP1B-221ENST00000540209 PIP4K2AP48426 406 aaPredicted RBP25.57■■□□□ 1.68
RAP1B-221ENST00000540209 CAMTA2O94983 1202 aa25.56■■□□□ 1.68
RAP1B-221ENST00000540209 SERPINB2P05120 415 aa25.56■■□□□ 1.68
RAP1B-221ENST00000540209 TMPOP42166 694 aaKnown RBP25.56■■□□□ 1.68
RAP1B-221ENST00000540209 RIPK4P57078 832 aa25.56■■□□□ 1.68
RAP1B-221ENST00000540209 TBC1D9BQ66K14 1250 aa25.56■■□□□ 1.68
RAP1B-221ENST00000540209 NPM2Q86SE8 214 aaKnown RBP25.56■■□□□ 1.68
RAP1B-221ENST00000540209 BCS1LQ9Y276 419 aa25.56■■□□□ 1.68
RAP1B-221ENST00000540209 ANKRD31Q8N7Z5 1873 aa25.55■■□□□ 1.68
RAP1B-221ENST00000540209 EIF4A1P60842 406 aaKnown RBP25.55■■□□□ 1.68
RAP1B-221ENST00000540209 ADCY9O60503 1353 aa25.55■■□□□ 1.68
RAP1B-221ENST00000540209 NBPF26B4DH59 902 aa25.54■■□□□ 1.68
RAP1B-221ENST00000540209 WDR43Q15061 677 aaKnown RBP eCLIP25.54■■□□□ 1.68
RAP1B-221ENST00000540209 NBPF10Q6P3W6 841 aaKnown RBP25.54■■□□□ 1.68
RAP1B-221ENST00000540209 DZIP3Q86Y13 1208 aaKnown RBP25.54■■□□□ 1.68
RAP1B-221ENST00000540209 NBPF15Q8N660 670 aa25.54■■□□□ 1.68
RAP1B-221ENST00000540209 CHRNA5P30532 468 aa25.53■■□□□ 1.68
RAP1B-221ENST00000540209 BICDL1Q6ZP65 573 aa25.53■■□□□ 1.68
RAP1B-221ENST00000540209 CCDC146Q8IYE0 955 aa25.53■■□□□ 1.68
RAP1B-221ENST00000540209 PIM2Q9P1W9 311 aa25.53■■□□□ 1.68
RAP1B-221ENST00000540209 CARMIL3Q8ND23 1372 aa25.53■■□□□ 1.68
RAP1B-221ENST00000540209 LMOD3Q0VAK6 560 aa25.52■■□□□ 1.68
RAP1B-221ENST00000540209 ADAMTS8Q9UP79 889 aa25.52■■□□□ 1.68
RAP1B-221ENST00000540209 IFFO2Q5TF58 517 aa25.51■■□□□ 1.67
RAP1B-221ENST00000540209 RUNDC1Q96C34 613 aa25.51■■□□□ 1.67
RAP1B-221ENST00000540209 CEP350Q5VT06 3117 aa25.5■■□□□ 1.67
RAP1B-221ENST00000540209 ATP10DQ9P241 1426 aa25.5■■□□□ 1.67
RAP1B-221ENST00000540209 RRP7AQ9Y3A4 280 aaKnown RBP25.49■■□□□ 1.67
RAP1B-221ENST00000540209 COL11A2P13942 1736 aaPredicted RBP25.49■■□□□ 1.67
RAP1B-221ENST00000540209 DALRD3Q5D0E6 543 aaKnown RBP25.48■■□□□ 1.67
RAP1B-221ENST00000540209 CLEC4GQ6UXB4 293 aa25.48■■□□□ 1.67
RAP1B-221ENST00000540209 BABAM1Q9NWV8 329 aa25.48■■□□□ 1.67
RAP1B-221ENST00000540209 TSPYL4Q9UJ04 414 aa25.48■■□□□ 1.67
RAP1B-221ENST00000540209 RGL2O15211 777 aa25.47■■□□□ 1.67
RAP1B-221ENST00000540209 NEUROD2Q15784 382 aa25.46■■□□□ 1.67
RAP1B-221ENST00000540209 PRR5LQ6MZQ0 368 aa25.46■■□□□ 1.67
RAP1B-221ENST00000540209 SETDB2Q96T68 719 aa25.46■■□□□ 1.67
RAP1B-221ENST00000540209 TRIM35Q9UPQ4 493 aa25.46■■□□□ 1.67
RAP1B-221ENST00000540209 NUP98P52948 1817 aa25.46■■□□□ 1.67
RAP1B-221ENST00000540209 ZNF652Q9Y2D9 606 aa25.45■■□□□ 1.66
RAP1B-221ENST00000540209 ARHGAP27Q6ZUM4 889 aa25.44■■□□□ 1.66
RAP1B-221ENST00000540209 SBF1O95248 1867 aa25.43■■□□□ 1.66
RAP1B-221ENST00000540209 BRIP1Q9BX63 1249 aa25.43■■□□□ 1.66
RAP1B-221ENST00000540209 C2CD5Q86YS7 1000 aa25.42■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms