RNA–Protein interactions for RNA: ENST00000540159.3

BNIP3-202, Transcript of BCL2 interacting protein 3, humanhuman

TSL 1 (best)

Gene BNIP3, Length 3,066 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BNIP3-202ENST00000540159 IBTKQ9P2D0 1353 aaPredicted RBP16.62■□□□□ 0.25
BNIP3-202ENST00000540159 TMEM63CQ9P1W3 806 aa16.62■□□□□ 0.25
BNIP3-202ENST00000540159 RHPN1Q8TCX5 695 aa16.61■□□□□ 0.25
BNIP3-202ENST00000540159 SIL1Q9H173 461 aa16.61■□□□□ 0.25
BNIP3-202ENST00000540159 DIP2AQ14689 1571 aa16.61■□□□□ 0.25
BNIP3-202ENST00000540159 CYP2E1P05181 493 aaPredicted RBP16.61■□□□□ 0.25
BNIP3-202ENST00000540159 MCCP23508 829 aa16.61■□□□□ 0.25
BNIP3-202ENST00000540159 CCDC9Q9Y3X0 531 aaKnown RBP16.61■□□□□ 0.25
BNIP3-202ENST00000540159 KIF13AQ9H1H9 1805 aa16.61■□□□□ 0.25
BNIP3-202ENST00000540159 ANP32BQ92688 251 aaKnown RBP16.61■□□□□ 0.25
BNIP3-202ENST00000540159 OSBPL3Q9H4L5 887 aa16.61■□□□□ 0.25
BNIP3-202ENST00000540159 SALL3Q9BXA9 1300 aa16.6■□□□□ 0.25
BNIP3-202ENST00000540159 EIF4A1P60842 406 aaKnown RBP16.59■□□□□ 0.25
BNIP3-202ENST00000540159 SLC39A6Q13433 755 aa16.59■□□□□ 0.25
BNIP3-202ENST00000540159 KLHDC4Q8TBB5 520 aa16.59■□□□□ 0.25
BNIP3-202ENST00000540159 C9orf78Q9NZ63 289 aaPredicted RBP16.59■□□□□ 0.25
BNIP3-202ENST00000540159 PIK3C2AO00443 1686 aa16.59■□□□□ 0.25
BNIP3-202ENST00000540159 CLCN1P35523 988 aa16.59■□□□□ 0.25
BNIP3-202ENST00000540159 ZC3H6P61129 1189 aaKnown RBP16.59■□□□□ 0.25
BNIP3-202ENST00000540159 DNAAF4Q8WXU2 420 aa16.59■□□□□ 0.25
BNIP3-202ENST00000540159 RGPD1P0DJD0 1748 aa16.59■□□□□ 0.25
BNIP3-202ENST00000540159 RASEFQ8IZ41 740 aa16.59■□□□□ 0.25
BNIP3-202ENST00000540159 GADD45BO75293 160 aaPredicted RBP16.58■□□□□ 0.24
BNIP3-202ENST00000540159 MAP3K2Q9Y2U5 619 aa16.58■□□□□ 0.24
BNIP3-202ENST00000540159 DDX17Q92841 729 aaKnown RBP16.58■□□□□ 0.24
BNIP3-202ENST00000540159 CWC22Q9HCG8 908 aaKnown RBP16.58■□□□□ 0.24
BNIP3-202ENST00000540159 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.58■□□□□ 0.24
BNIP3-202ENST00000540159 MYL6BP14649 208 aa16.57■□□□□ 0.24
BNIP3-202ENST00000540159 TCEANC2Q96MN5 208 aa16.57■□□□□ 0.24
BNIP3-202ENST00000540159 TOPAZ1Q8N9V7 1692 aa16.57■□□□□ 0.24
BNIP3-202ENST00000540159 SSH3Q8TE77 659 aa16.56■□□□□ 0.24
BNIP3-202ENST00000540159 FMN2Q9NZ56 1722 aa16.56■□□□□ 0.24
BNIP3-202ENST00000540159 COL9A3Q14050 684 aaPredicted RBP16.56■□□□□ 0.24
BNIP3-202ENST00000540159 CCDC8Q9H0W5 538 aaPredicted RBP16.56■□□□□ 0.24
BNIP3-202ENST00000540159 BEND3Q5T5X7 828 aa16.55■□□□□ 0.24
BNIP3-202ENST00000540159 PI4K2BQ8TCG2 481 aa16.55■□□□□ 0.24
BNIP3-202ENST00000540159 NDUFB9Q9Y6M9 179 aa16.55■□□□□ 0.24
BNIP3-202ENST00000540159 C1orf141Q5JVX7 400 aa16.55■□□□□ 0.24
BNIP3-202ENST00000540159 IP6K1Q92551 441 aa16.55■□□□□ 0.24
BNIP3-202ENST00000540159 NALCNQ8IZF0 1738 aa16.55■□□□□ 0.24
BNIP3-202ENST00000540159 AXIN2Q9Y2T1 843 aa16.54■□□□□ 0.24
BNIP3-202ENST00000540159 CHMP3Q9Y3E7 222 aa16.54■□□□□ 0.24
BNIP3-202ENST00000540159 HTATSF1O43719 755 aaKnown RBP16.54■□□□□ 0.24
BNIP3-202ENST00000540159 CASTP20810 708 aaKnown RBP16.54■□□□□ 0.24
BNIP3-202ENST00000540159 PTMSP20962 102 aa16.54■□□□□ 0.24
BNIP3-202ENST00000540159 KIAA1211Q6ZU35 1233 aa16.54■□□□□ 0.24
BNIP3-202ENST00000540159 LARGE1O95461 756 aa16.53■□□□□ 0.24
BNIP3-202ENST00000540159 PTH1RQ03431 593 aa16.53■□□□□ 0.24
BNIP3-202ENST00000540159 KIF1BPQ96EK5 621 aa16.53■□□□□ 0.24
BNIP3-202ENST00000540159 AK2P54819 239 aa16.53■□□□□ 0.24
BNIP3-202ENST00000540159 PLCB2Q00722 1185 aa16.53■□□□□ 0.24
BNIP3-202ENST00000540159 PRPF40BQ6NWY9 871 aaKnown RBP16.53■□□□□ 0.24
BNIP3-202ENST00000540159 DIAPH3Q9NSV4 1193 aa16.53■□□□□ 0.24
BNIP3-202ENST00000540159 GCP02774 474 aa16.52■□□□□ 0.24
BNIP3-202ENST00000540159 KCNJ4P48050 445 aa16.52■□□□□ 0.24
BNIP3-202ENST00000540159 ADCK5Q3MIX3 580 aa16.52■□□□□ 0.24
BNIP3-202ENST00000540159 CLEC17AQ6ZS10 378 aa16.52■□□□□ 0.24
BNIP3-202ENST00000540159 AACSQ86V21 672 aa16.52■□□□□ 0.24
BNIP3-202ENST00000540159 SNX14Q9Y5W7 946 aa16.52■□□□□ 0.24
BNIP3-202ENST00000540159 FIBPO43427 364 aa16.52■□□□□ 0.23
BNIP3-202ENST00000540159 CCDC173Q0VFZ6 552 aa16.52■□□□□ 0.23
BNIP3-202ENST00000540159 EDC3Q96F86 508 aaKnown RBP16.52■□□□□ 0.23
BNIP3-202ENST00000540159 STAP2Q9UGK3 403 aa16.52■□□□□ 0.23
BNIP3-202ENST00000540159 CCDC83Q8IWF9 413 aa16.51■□□□□ 0.23
BNIP3-202ENST00000540159 CNTROBQ8N137 903 aa16.51■□□□□ 0.23
BNIP3-202ENST00000540159 TLR7Q9NYK1 1049 aaKnown RBP16.51■□□□□ 0.23
BNIP3-202ENST00000540159 CNPY2Q9Y2B0 182 aa16.51■□□□□ 0.23
BNIP3-202ENST00000540159 BRD1O95696 1058 aa16.51■□□□□ 0.23
BNIP3-202ENST00000540159 MSNP26038 577 aaKnown RBP16.51■□□□□ 0.23
BNIP3-202ENST00000540159 NECAB1Q8N987 351 aa16.51■□□□□ 0.23
BNIP3-202ENST00000540159 ANKRD24Q8TF21 1146 aa16.51■□□□□ 0.23
BNIP3-202ENST00000540159 SGSM2O43147 1006 aa16.51■□□□□ 0.23
BNIP3-202ENST00000540159 CHGBP05060 677 aa16.51■□□□□ 0.23
BNIP3-202ENST00000540159 IFIT2P09913 472 aaKnown RBP16.51■□□□□ 0.23
BNIP3-202ENST00000540159 ISY1Q9ULR0 285 aaKnown RBP16.51■□□□□ 0.23
BNIP3-202ENST00000540159 ADCY9O60503 1353 aa16.51■□□□□ 0.23
BNIP3-202ENST00000540159 NWD1Q149M9 1564 aa16.5■□□□□ 0.23
BNIP3-202ENST00000540159 USP48Q86UV5 1035 aa16.5■□□□□ 0.23
BNIP3-202ENST00000540159 CLASRPQ8N2M8 674 aaKnown RBP16.5■□□□□ 0.23
BNIP3-202ENST00000540159 CABLES1Q8TDN4 633 aa16.5■□□□□ 0.23
BNIP3-202ENST00000540159 FAM227BQ96M60 508 aa16.5■□□□□ 0.23
BNIP3-202ENST00000540159 JAKMIP1Q96N16 626 aaKnown RBP16.5■□□□□ 0.23
BNIP3-202ENST00000540159 ARID3AQ99856 593 aa16.5■□□□□ 0.23
BNIP3-202ENST00000540159 BOLA2Q9H3K6 86 aa16.5■□□□□ 0.23
BNIP3-202ENST00000540159 HSPA4P34932 840 aa16.5■□□□□ 0.23
BNIP3-202ENST00000540159 ZNF445P59923 1031 aa16.5■□□□□ 0.23
BNIP3-202ENST00000540159 PLEKHO1Q53GL0 409 aaPredicted RBP16.49■□□□□ 0.23
BNIP3-202ENST00000540159 TCHHQ07283 1943 aa16.49■□□□□ 0.23
BNIP3-202ENST00000540159 RNMTO43148 476 aaKnown RBP16.49■□□□□ 0.23
BNIP3-202ENST00000540159 NLRP2Q9NX02 1062 aa16.49■□□□□ 0.23
BNIP3-202ENST00000540159 POLA2Q14181 598 aa16.49■□□□□ 0.23
BNIP3-202ENST00000540159 RUFY3Q7L099 469 aa16.49■□□□□ 0.23
BNIP3-202ENST00000540159 FERMT3Q86UX7 667 aa16.49■□□□□ 0.23
BNIP3-202ENST00000540159 SUCLG2Q96I99 432 aa16.49■□□□□ 0.23
BNIP3-202ENST00000540159 BICC1Q9H694 974 aaKnown RBP16.49■□□□□ 0.23
BNIP3-202ENST00000540159 PXDNQ92626 1479 aa16.48■□□□□ 0.23
BNIP3-202ENST00000540159 ANKLE2Q86XL3 938 aa16.48■□□□□ 0.23
BNIP3-202ENST00000540159 LSG1Q9H089 658 aaKnown RBP16.48■□□□□ 0.23
BNIP3-202ENST00000540159 DBF4Q9UBU7 674 aaPredicted RBP16.48■□□□□ 0.23
BNIP3-202ENST00000540159 VPS37CA5D8V6 355 aaPredicted RBP16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms