RNA–Protein interactions for RNA: ENST00000539856.5

CWC15-202, Transcript of CWC15 spliceosome associated protein homolog, humanhuman

TSL 2

Gene CWC15, Length 905 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CWC15-202ENST00000539856 SLC4A9Q96Q91 983 aa13.46□□□□□ -0.25
CWC15-202ENST00000539856 PDGFDQ9GZP0 370 aaPredicted RBP13.46□□□□□ -0.25
CWC15-202ENST00000539856 SPON1Q9HCB6 807 aa13.46□□□□□ -0.25
CWC15-202ENST00000539856 C5P01031 1676 aa13.46□□□□□ -0.26
CWC15-202ENST00000539856 CEMIPQ8WUJ3 1361 aa13.45□□□□□ -0.26
CWC15-202ENST00000539856 DLG5Q8TDM6 1919 aa13.45□□□□□ -0.26
CWC15-202ENST00000539856 MRC1P22897 1456 aa13.45□□□□□ -0.26
CWC15-202ENST00000539856 BTBD11A6QL63 1104 aa13.45□□□□□ -0.26
CWC15-202ENST00000539856 RIPK4P57078 832 aa13.45□□□□□ -0.26
CWC15-202ENST00000539856 CCDC146Q8IYE0 955 aa13.45□□□□□ -0.26
CWC15-202ENST00000539856 PNPLA7Q6ZV29 1317 aa13.44□□□□□ -0.26
CWC15-202ENST00000539856 ZBTB7AO95365 584 aa13.44□□□□□ -0.26
CWC15-202ENST00000539856 TMPOP42166 694 aaKnown RBP13.44□□□□□ -0.26
CWC15-202ENST00000539856 TAF7Q15545 349 aaPredicted RBP13.44□□□□□ -0.26
CWC15-202ENST00000539856 CCDC184Q52MB2 194 aa13.44□□□□□ -0.26
CWC15-202ENST00000539856 RC3H1Q5TC82 1133 aaKnown RBP13.44□□□□□ -0.26
CWC15-202ENST00000539856 ZNF790Q6PG37 636 aa13.44□□□□□ -0.26
CWC15-202ENST00000539856 MRS2Q9HD23 443 aa13.44□□□□□ -0.26
CWC15-202ENST00000539856 C4BP0C0L5 1744 aa13.44□□□□□ -0.26
CWC15-202ENST00000539856 QSER1Q2KHR3 1735 aa13.44□□□□□ -0.26
CWC15-202ENST00000539856 ZNF831Q5JPB2 1677 aa13.44□□□□□ -0.26
CWC15-202ENST00000539856 CLCN6P51797 869 aa13.43□□□□□ -0.26
CWC15-202ENST00000539856 NEUROD2Q15784 382 aa13.43□□□□□ -0.26
CWC15-202ENST00000539856 COL23A1Q86Y22 540 aaPredicted RBP13.43□□□□□ -0.26
CWC15-202ENST00000539856 VSIG10Q8N0Z9 540 aa13.43□□□□□ -0.26
CWC15-202ENST00000539856 MTFR1LQ9H019 292 aa13.43□□□□□ -0.26
CWC15-202ENST00000539856 CASZ1Q86V15 1759 aa13.43□□□□□ -0.26
CWC15-202ENST00000539856 GNPATO15228 680 aa13.42□□□□□ -0.26
CWC15-202ENST00000539856 LMOD3Q0VAK6 560 aa13.42□□□□□ -0.26
CWC15-202ENST00000539856 DNAJC10Q8IXB1 793 aa13.42□□□□□ -0.26
CWC15-202ENST00000539856 PNISRQ8TF01 805 aaKnown RBP13.42□□□□□ -0.26
CWC15-202ENST00000539856 TEX13AQ9BXU3 409 aaPredicted RBP13.42□□□□□ -0.26
CWC15-202ENST00000539856 RTCBQ9Y3I0 505 aaKnown RBP13.42□□□□□ -0.26
CWC15-202ENST00000539856 SIPA1L3O60292 1781 aaPredicted RBP13.42□□□□□ -0.26
CWC15-202ENST00000539856 CNTNAP4Q9C0A0 1308 aa13.41□□□□□ -0.26
CWC15-202ENST00000539856 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.41□□□□□ -0.26
CWC15-202ENST00000539856 SSFA2P28290 1259 aa13.41□□□□□ -0.26
CWC15-202ENST00000539856 TRAPPC3LQ5T215 181 aa13.41□□□□□ -0.26
CWC15-202ENST00000539856 FMNL2Q96PY5 1086 aa13.41□□□□□ -0.26
CWC15-202ENST00000539856 PPP1R1BQ9UD71 204 aaPredicted RBP13.41□□□□□ -0.26
CWC15-202ENST00000539856 RRP7AQ9Y3A4 280 aaKnown RBP13.41□□□□□ -0.26
CWC15-202ENST00000539856 TUBGCP6Q96RT7 1819 aa13.41□□□□□ -0.26
CWC15-202ENST00000539856 LRP5O75197 1615 aa13.4□□□□□ -0.26
CWC15-202ENST00000539856 KCNQ3O43525 872 aa13.4□□□□□ -0.26
CWC15-202ENST00000539856 RPS6KA4O75676 772 aa13.4□□□□□ -0.26
CWC15-202ENST00000539856 PHF14O94880 888 aa13.4□□□□□ -0.26
CWC15-202ENST00000539856 ZNF496Q96IT1 587 aaPredicted RBP13.4□□□□□ -0.26
CWC15-202ENST00000539856 PHF12Q96QT6 1004 aa13.4□□□□□ -0.26
CWC15-202ENST00000539856 STARD3NLO95772 234 aa13.39□□□□□ -0.27
CWC15-202ENST00000539856 CRKLP46109 303 aaKnown RBP13.39□□□□□ -0.27
CWC15-202ENST00000539856 SP7Q8TDD2 431 aaPredicted RBP13.39□□□□□ -0.27
CWC15-202ENST00000539856 THUMPD2Q9BTF0 503 aaKnown RBP13.39□□□□□ -0.27
CWC15-202ENST00000539856 HEG1Q9ULI3 1381 aa13.39□□□□□ -0.27
CWC15-202ENST00000539856 UBR3Q6ZT12 1888 aa13.39□□□□□ -0.27
CWC15-202ENST00000539856 KCPQ6ZWJ8 1503 aa13.39□□□□□ -0.27
CWC15-202ENST00000539856 APAF1O14727 1248 aa13.38□□□□□ -0.27
CWC15-202ENST00000539856 PYGBP11216 843 aa13.38□□□□□ -0.27
CWC15-202ENST00000539856 CHRM1P11229 460 aaPredicted RBP13.38□□□□□ -0.27
CWC15-202ENST00000539856 CYP19A1P11511 503 aaPredicted RBP13.38□□□□□ -0.27
CWC15-202ENST00000539856 POLD1P28340 1107 aa13.38□□□□□ -0.27
CWC15-202ENST00000539856 SMIM5Q71RC9 77 aa13.38□□□□□ -0.27
CWC15-202ENST00000539856 MIS18AQ9NYP9 233 aa13.38□□□□□ -0.27
CWC15-202ENST00000539856 COL5A3P25940 1745 aaPredicted RBP13.38□□□□□ -0.27
CWC15-202ENST00000539856 MYH14Q7Z406 1995 aaKnown RBP13.38□□□□□ -0.27
CWC15-202ENST00000539856 UBR2Q8IWV8 1755 aa13.37□□□□□ -0.27
CWC15-202ENST00000539856 TJP1Q07157 1748 aa13.37□□□□□ -0.27
CWC15-202ENST00000539856 SNRPA1P09661 255 aaKnown RBP13.37□□□□□ -0.27
CWC15-202ENST00000539856 PTGER2P43116 358 aa13.37□□□□□ -0.27
CWC15-202ENST00000539856 INTS5Q6P9B9 1019 aaKnown RBP13.37□□□□□ -0.27
CWC15-202ENST00000539856 AMIGO3Q86WK7 504 aa13.37□□□□□ -0.27
CWC15-202ENST00000539856 CCDC87Q9NVE4 849 aa13.37□□□□□ -0.27
CWC15-202ENST00000539856 CICQ96RK0 1608 aaPredicted RBP13.36□□□□□ -0.27
CWC15-202ENST00000539856 RFC4P35249 363 aa13.36□□□□□ -0.27
CWC15-202ENST00000539856 ARHGEF1Q92888 912 aaKnown RBP13.36□□□□□ -0.27
CWC15-202ENST00000539856 KIF12Q96FN5 646 aa13.36□□□□□ -0.27
CWC15-202ENST00000539856 BABAM1Q9NWV8 329 aa13.36□□□□□ -0.27
CWC15-202ENST00000539856 TRIM35Q9UPQ4 493 aa13.36□□□□□ -0.27
CWC15-202ENST00000539856 CANXP27824 592 aaKnown RBP13.35□□□□□ -0.27
CWC15-202ENST00000539856 ARXQ96QS3 562 aa13.35□□□□□ -0.27
CWC15-202ENST00000539856 SGIP1Q9BQI5 828 aa13.35□□□□□ -0.27
CWC15-202ENST00000539856 TSPYL4Q9UJ04 414 aa13.35□□□□□ -0.27
CWC15-202ENST00000539856 MSL1Q68DK7 614 aa13.34□□□□□ -0.27
CWC15-202ENST00000539856 NPM2Q86SE8 214 aaKnown RBP13.34□□□□□ -0.27
CWC15-202ENST00000539856 FAM9BQ8IZU0 186 aa13.34□□□□□ -0.27
CWC15-202ENST00000539856 ZBTB1Q9Y2K1 713 aa13.34□□□□□ -0.27
CWC15-202ENST00000539856 USP16Q9Y5T5 823 aa13.34□□□□□ -0.27
CWC15-202ENST00000539856 EIF4A1P60842 406 aaKnown RBP13.33□□□□□ -0.28
CWC15-202ENST00000539856 NLGN1Q8N2Q7 840 aa13.33□□□□□ -0.28
CWC15-202ENST00000539856 LAS1LQ9Y4W2 734 aaKnown RBP13.33□□□□□ -0.28
CWC15-202ENST00000539856 A0A087WZG4 1122 aa13.32□□□□□ -0.28
CWC15-202ENST00000539856 MAP3K13O43283 966 aa13.32□□□□□ -0.28
CWC15-202ENST00000539856 ZPR1O75312 459 aa13.32□□□□□ -0.28
CWC15-202ENST00000539856 A1BGP04217 495 aa13.32□□□□□ -0.28
CWC15-202ENST00000539856 IL6STP40189 918 aaPredicted RBP13.32□□□□□ -0.28
CWC15-202ENST00000539856 CALD1Q05682 793 aaKnown RBP13.32□□□□□ -0.28
CWC15-202ENST00000539856 COL24A1Q17RW2 1714 aa13.32□□□□□ -0.28
CWC15-202ENST00000539856 SOS1Q07889 1333 aaPredicted RBP13.32□□□□□ -0.28
CWC15-202ENST00000539856 KDM3BQ7LBC6 1761 aa13.32□□□□□ -0.28
CWC15-202ENST00000539856 PRAMEF22A3QJZ6 481 aa13.31□□□□□ -0.28
CWC15-202ENST00000539856 CHL1O00533 1208 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms