RNA–Protein interactions for RNA: ENST00000539815.5

GNE-205, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GNE, Length 3,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-205ENST00000539815 ALDH1B1P30837 517 aa9.97□□□□□ -0.81
GNE-205ENST00000539815 ATG3Q9NT62 314 aa9.97□□□□□ -0.81
GNE-205ENST00000539815 SLC39A6Q13433 755 aa9.97□□□□□ -0.81
GNE-205ENST00000539815 FKBP8Q14318 412 aa9.97□□□□□ -0.81
GNE-205ENST00000539815 FMNL2Q96PY5 1086 aa9.97□□□□□ -0.81
GNE-205ENST00000539815 RRP7AQ9Y3A4 280 aaKnown RBP9.97□□□□□ -0.81
GNE-205ENST00000539815 ITSN1Q15811 1721 aa9.97□□□□□ -0.81
GNE-205ENST00000539815 CC2D1BQ5T0F9 858 aaKnown RBP9.97□□□□□ -0.81
GNE-205ENST00000539815 DIEXFQ68CQ4 756 aaKnown RBP9.97□□□□□ -0.81
GNE-205ENST00000539815 ZMYND15Q9H091 742 aa9.97□□□□□ -0.81
GNE-205ENST00000539815 TMEM88BA6NKF7 163 aa9.96□□□□□ -0.81
GNE-205ENST00000539815 GYS1P13807 737 aa9.96□□□□□ -0.81
GNE-205ENST00000539815 MARF1Q9Y4F3 1742 aaKnown RBP9.96□□□□□ -0.81
GNE-205ENST00000539815 U2AF1L5P0DN76 240 aaPredicted RBP9.96□□□□□ -0.81
GNE-205ENST00000539815 U2AF1Q01081 240 aaKnown RBP eCLIP9.96□□□□□ -0.81
GNE-205ENST00000539815 IL27Q8NEV9 243 aa9.96□□□□□ -0.81
GNE-205ENST00000539815 BCL9O00512 1426 aa9.96□□□□□ -0.82
GNE-205ENST00000539815 H7C1D1 291 aa9.95□□□□□ -0.82
GNE-205ENST00000539815 ITPK1Q13572 414 aa9.95□□□□□ -0.82
GNE-205ENST00000539815 DZIP3Q86Y13 1208 aaKnown RBP9.95□□□□□ -0.82
GNE-205ENST00000539815 RTKN2Q8IZC4 609 aa9.95□□□□□ -0.82
GNE-205ENST00000539815 FBXW7Q969H0 707 aa9.95□□□□□ -0.82
GNE-205ENST00000539815 PNNQ9H307 717 aaKnown RBP9.95□□□□□ -0.82
GNE-205ENST00000539815 NIP7Q9Y221 180 aaKnown RBP eCLIP9.95□□□□□ -0.82
GNE-205ENST00000539815 PANK3Q9H999 370 aa9.95□□□□□ -0.82
GNE-205ENST00000539815 ZC3H4Q9UPT8 1303 aaKnown RBP9.95□□□□□ -0.82
GNE-205ENST00000539815 LDHDQ86WU2 507 aa9.94□□□□□ -0.82
GNE-205ENST00000539815 DDNO94850 711 aaPredicted RBP9.94□□□□□ -0.82
GNE-205ENST00000539815 AKAP4Q5JQC9 854 aa9.94□□□□□ -0.82
GNE-205ENST00000539815 NARFQ9UHQ1 456 aa9.94□□□□□ -0.82
GNE-205ENST00000539815 SUPT16HQ9Y5B9 1047 aaKnown RBP9.94□□□□□ -0.82
GNE-205ENST00000539815 IFT172Q9UG01 1749 aa9.94□□□□□ -0.82
GNE-205ENST00000539815 NF2P35240 595 aa9.94□□□□□ -0.82
GNE-205ENST00000539815 AAMPQ13685 434 aa9.94□□□□□ -0.82
GNE-205ENST00000539815 RGPD8O14715 1765 aaPredicted RBP9.94□□□□□ -0.82
GNE-205ENST00000539815 LBX1P52954 281 aa9.93□□□□□ -0.82
GNE-205ENST00000539815 EIF4A2Q14240 407 aaKnown RBP9.93□□□□□ -0.82
GNE-205ENST00000539815 NFIXQ14938 502 aa9.93□□□□□ -0.82
GNE-205ENST00000539815 MASTLQ96GX5 879 aa9.93□□□□□ -0.82
GNE-205ENST00000539815 NYXQ9GZU5 481 aa9.93□□□□□ -0.82
GNE-205ENST00000539815 CD163L1Q9NR16 1453 aa9.93□□□□□ -0.82
GNE-205ENST00000539815 TRIM26Q12899 539 aaPredicted RBP9.93□□□□□ -0.82
GNE-205ENST00000539815 CC2D2BQ6DHV5 1058 aa9.93□□□□□ -0.82
GNE-205ENST00000539815 BRIP1Q9BX63 1249 aa9.93□□□□□ -0.82
GNE-205ENST00000539815 CNTNAP4Q9C0A0 1308 aa9.93□□□□□ -0.82
GNE-205ENST00000539815 BTBD11A6QL63 1104 aa9.92□□□□□ -0.82
GNE-205ENST00000539815 PPIP5K2O43314 1243 aa9.92□□□□□ -0.82
GNE-205ENST00000539815 RBM10P98175 930 aaKnown RBP9.92□□□□□ -0.82
GNE-205ENST00000539815 RBM26Q5T8P6 1007 aaKnown RBP9.92□□□□□ -0.82
GNE-205ENST00000539815 DHX37Q8IY37 1157 aaKnown RBP9.92□□□□□ -0.82
GNE-205ENST00000539815 SUPT20HQ8NEM7 779 aa9.92□□□□□ -0.82
GNE-205ENST00000539815 CREBZFQ9NS37 354 aa9.92□□□□□ -0.82
GNE-205ENST00000539815 KNDC1Q76NI1 1749 aa9.92□□□□□ -0.82
GNE-205ENST00000539815 EPHX2P34913 555 aa9.92□□□□□ -0.82
GNE-205ENST00000539815 SBNO2Q9Y2G9 1366 aa9.92□□□□□ -0.82
GNE-205ENST00000539815 HSP90B1P14625 803 aaKnown RBP9.92□□□□□ -0.82
GNE-205ENST00000539815 MAP1SQ66K74 1059 aaPredicted RBP9.92□□□□□ -0.82
GNE-205ENST00000539815 GPR101Q96P66 508 aaPredicted RBP9.92□□□□□ -0.82
GNE-205ENST00000539815 NLRP3Q96P20 1036 aa9.91□□□□□ -0.82
GNE-205ENST00000539815 ZBTB1Q9Y2K1 713 aa9.91□□□□□ -0.82
GNE-205ENST00000539815 SRCAPQ6ZRS2 3230 aa9.91□□□□□ -0.82
GNE-205ENST00000539815 C6orf229H3BNL8 230 aa9.91□□□□□ -0.82
GNE-205ENST00000539815 KIF24Q5T7B8 1368 aa9.91□□□□□ -0.82
GNE-205ENST00000539815 CNTROBQ8N137 903 aa9.91□□□□□ -0.82
GNE-205ENST00000539815 USP42Q9H9J4 1324 aaKnown RBP9.91□□□□□ -0.82
GNE-205ENST00000539815 LAS1LQ9Y4W2 734 aaKnown RBP9.91□□□□□ -0.82
GNE-205ENST00000539815 ADGRB1O14514 1584 aa9.9□□□□□ -0.82
GNE-205ENST00000539815 C2orf69Q8N8R5 385 aa9.9□□□□□ -0.82
GNE-205ENST00000539815 GNAT3A8MTJ3 354 aa9.9□□□□□ -0.82
GNE-205ENST00000539815 TULP1O00294 542 aaPredicted RBP9.9□□□□□ -0.82
GNE-205ENST00000539815 NPR1P16066 1061 aa9.9□□□□□ -0.82
GNE-205ENST00000539815 DGKZQ13574 1117 aa9.9□□□□□ -0.82
GNE-205ENST00000539815 POLKQ9UBT6 870 aa9.9□□□□□ -0.82
GNE-205ENST00000539815 CA12O43570 354 aa9.89□□□□□ -0.83
GNE-205ENST00000539815 EIF2S2P20042 333 aaKnown RBP9.89□□□□□ -0.83
GNE-205ENST00000539815 DDX46Q7L014 1031 aaKnown RBP9.89□□□□□ -0.83
GNE-205ENST00000539815 PPP1R42Q7Z4L9 355 aa9.89□□□□□ -0.83
GNE-205ENST00000539815 VSIG10Q8N0Z9 540 aa9.89□□□□□ -0.83
GNE-205ENST00000539815 DCPSQ96C86 337 aaKnown RBP9.89□□□□□ -0.83
GNE-205ENST00000539815 RBM17Q96I25 401 aaKnown RBP9.89□□□□□ -0.83
GNE-205ENST00000539815 ZNF277Q9NRM2 450 aaPredicted RBP9.89□□□□□ -0.83
GNE-205ENST00000539815 FAM161AQ3B820 660 aa9.89□□□□□ -0.83
GNE-205ENST00000539815 SULF1Q8IWU6 871 aa9.89□□□□□ -0.83
GNE-205ENST00000539815 SLC52A2Q9HAB3 445 aa9.89□□□□□ -0.83
GNE-205ENST00000539815 PRPF40BQ6NWY9 871 aaKnown RBP9.88□□□□□ -0.83
GNE-205ENST00000539815 PRDM10Q9NQV6 1147 aa9.88□□□□□ -0.83
GNE-205ENST00000539815 THSD7AQ9UPZ6 1657 aa9.88□□□□□ -0.83
GNE-205ENST00000539815 GPTP24298 496 aa9.88□□□□□ -0.83
GNE-205ENST00000539815 TNIP1Q15025 636 aa9.88□□□□□ -0.83
GNE-205ENST00000539815 CHD4Q14839 1912 aa9.88□□□□□ -0.83
GNE-205ENST00000539815 NKX1-1Q15270 411 aaPredicted RBP9.88□□□□□ -0.83
GNE-205ENST00000539815 CAPNS2Q96L46 248 aa9.88□□□□□ -0.83
GNE-205ENST00000539815 PDE4DIPQ5VU43 2346 aa9.87□□□□□ -0.83
GNE-205ENST00000539815 ABHD8Q96I13 439 aa9.87□□□□□ -0.83
GNE-205ENST00000539815 RNMTO43148 476 aaKnown RBP9.87□□□□□ -0.83
GNE-205ENST00000539815 CELF2O95319 508 aaKnown RBP9.87□□□□□ -0.83
GNE-205ENST00000539815 SNRPA1P09661 255 aaKnown RBP9.87□□□□□ -0.83
GNE-205ENST00000539815 CHMP4AQ9BY43 222 aa9.87□□□□□ -0.83
GNE-205ENST00000539815 HUNKP57058 714 aa9.87□□□□□ -0.83
GNE-205ENST00000539815 SYNE4Q8N205 404 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms