RNA–Protein interactions for RNA: ENST00000539712.5

DDB1-215, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,020 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-215ENST00000539712 PXDNLA1KZ92 1463 aa22.36■■□□□ 1.17
DDB1-215ENST00000539712 DCTN1Q14203 1278 aa22.36■■□□□ 1.17
DDB1-215ENST00000539712 USPL1Q5W0Q7 1092 aa22.36■■□□□ 1.17
DDB1-215ENST00000539712 BCL2L12Q9HB09 334 aa22.36■■□□□ 1.17
DDB1-215ENST00000539712 WWC3Q9ULE0 1092 aa22.36■■□□□ 1.17
DDB1-215ENST00000539712 BTBD11A6QL63 1104 aa22.35■■□□□ 1.17
DDB1-215ENST00000539712 HTATSF1O43719 755 aaKnown RBP22.35■■□□□ 1.17
DDB1-215ENST00000539712 EIF5P55010 431 aaKnown RBP22.35■■□□□ 1.17
DDB1-215ENST00000539712 NARFQ9UHQ1 456 aa22.35■■□□□ 1.17
DDB1-215ENST00000539712 PARP3Q9Y6F1 533 aa22.35■■□□□ 1.17
DDB1-215ENST00000539712 COL15A1P39059 1388 aa22.35■■□□□ 1.17
DDB1-215ENST00000539712 STARD3NLO95772 234 aa22.34■■□□□ 1.17
DDB1-215ENST00000539712 CANXP27824 592 aaKnown RBP22.34■■□□□ 1.17
DDB1-215ENST00000539712 TGFB2P61812 414 aa22.34■■□□□ 1.17
DDB1-215ENST00000539712 RALBP1Q15311 655 aa22.34■■□□□ 1.17
DDB1-215ENST00000539712 A0A0G2JLW4 131 aa22.33■■□□□ 1.17
DDB1-215ENST00000539712 POLRMTO00411 1230 aaKnown RBP22.33■■□□□ 1.17
DDB1-215ENST00000539712 FMNL2Q96PY5 1086 aa22.33■■□□□ 1.17
DDB1-215ENST00000539712 ZPR1O75312 459 aa22.32■■□□□ 1.16
DDB1-215ENST00000539712 KCNA3P22001 575 aa22.32■■□□□ 1.16
DDB1-215ENST00000539712 RTF1Q92541 710 aaKnown RBP22.32■■□□□ 1.16
DDB1-215ENST00000539712 TEX13AQ9BXU3 409 aaPredicted RBP22.32■■□□□ 1.16
DDB1-215ENST00000539712 DPEP1P16444 411 aa22.31■■□□□ 1.16
DDB1-215ENST00000539712 N4BP2Q86UW6 1770 aaPredicted RBP22.3■■□□□ 1.16
DDB1-215ENST00000539712 PRAMEF22A3QJZ6 481 aa22.3■■□□□ 1.16
DDB1-215ENST00000539712 A1BGP04217 495 aa22.3■■□□□ 1.16
DDB1-215ENST00000539712 NFIXQ14938 502 aa22.3■■□□□ 1.16
DDB1-215ENST00000539712 USP16Q9Y5T5 823 aa22.29■■□□□ 1.16
DDB1-215ENST00000539712 DLG5Q8TDM6 1919 aa22.27■■□□□ 1.16
DDB1-215ENST00000539712 IL6STP40189 918 aaPredicted RBP22.27■■□□□ 1.16
DDB1-215ENST00000539712 TAF7Q15545 349 aaPredicted RBP22.27■■□□□ 1.16
DDB1-215ENST00000539712 NFE2L2Q16236 605 aa22.27■■□□□ 1.16
DDB1-215ENST00000539712 MIS18AQ9NYP9 233 aa22.27■■□□□ 1.16
DDB1-215ENST00000539712 THUMPD2Q9BTF0 503 aaKnown RBP22.25■■□□□ 1.15
DDB1-215ENST00000539712 TBC1D2BQ9UPU7 963 aa22.25■■□□□ 1.15
DDB1-215ENST00000539712 BRCA1P38398 1863 aaKnown RBP22.25■■□□□ 1.15
DDB1-215ENST00000539712 NRXN2Q9P2S2 1712 aa22.24■■□□□ 1.15
DDB1-215ENST00000539712 A0A087WZG4 1122 aa22.24■■□□□ 1.15
DDB1-215ENST00000539712 SNRPA1P09661 255 aaKnown RBP22.24■■□□□ 1.15
DDB1-215ENST00000539712 MYBBP1AQ9BQG0 1328 aaKnown RBP22.24■■□□□ 1.15
DDB1-215ENST00000539712 AFDNP55196 1824 aaKnown RBP22.23■■□□□ 1.15
DDB1-215ENST00000539712 PIP4K2AP48426 406 aaPredicted RBP22.23■■□□□ 1.15
DDB1-215ENST00000539712 BCS1LQ9Y276 419 aa22.23■■□□□ 1.15
DDB1-215ENST00000539712 ADCY9O60503 1353 aa22.23■■□□□ 1.15
DDB1-215ENST00000539712 SERPINB2P05120 415 aa22.22■■□□□ 1.15
DDB1-215ENST00000539712 NEFMP07197 916 aa22.22■■□□□ 1.15
DDB1-215ENST00000539712 CHRNA5P30532 468 aa22.22■■□□□ 1.15
DDB1-215ENST00000539712 TBC1D9BQ66K14 1250 aa22.22■■□□□ 1.15
DDB1-215ENST00000539712 NBPF26B4DH59 902 aa22.21■■□□□ 1.15
DDB1-215ENST00000539712 CAMTA2O94983 1202 aa22.21■■□□□ 1.15
DDB1-215ENST00000539712 NBPF10Q6P3W6 841 aaKnown RBP22.21■■□□□ 1.15
DDB1-215ENST00000539712 NBPF15Q8N660 670 aa22.21■■□□□ 1.15
DDB1-215ENST00000539712 PNNQ9H307 717 aaKnown RBP22.21■■□□□ 1.15
DDB1-215ENST00000539712 PIM2Q9P1W9 311 aa22.2■■□□□ 1.14
DDB1-215ENST00000539712 ZNF330Q9Y3S2 320 aaPredicted RBP22.2■■□□□ 1.14
DDB1-215ENST00000539712 SCN7AQ01118 1682 aa22.2■■□□□ 1.14
DDB1-215ENST00000539712 BICDL1Q6ZP65 573 aa22.19■■□□□ 1.14
DDB1-215ENST00000539712 MAPK8IP3Q9UPT6 1336 aa22.19■■□□□ 1.14
DDB1-215ENST00000539712 ATP10DQ9P241 1426 aa22.19■■□□□ 1.14
DDB1-215ENST00000539712 CARMIL3Q8ND23 1372 aa22.18■■□□□ 1.14
DDB1-215ENST00000539712 PRKRIP1Q9H875 184 aaPredicted RBP22.18■■□□□ 1.14
DDB1-215ENST00000539712 KDM3BQ7LBC6 1761 aa22.17■■□□□ 1.14
DDB1-215ENST00000539712 GIGYF1O75420 1035 aaPredicted RBP22.17■■□□□ 1.14
DDB1-215ENST00000539712 EIF4A1P60842 406 aaKnown RBP22.17■■□□□ 1.14
DDB1-215ENST00000539712 PNISRQ8TF01 805 aaKnown RBP22.17■■□□□ 1.14
DDB1-215ENST00000539712 TMPOP42166 694 aaKnown RBP22.16■■□□□ 1.14
DDB1-215ENST00000539712 RIPK4P57078 832 aa22.16■■□□□ 1.14
DDB1-215ENST00000539712 DALRD3Q5D0E6 543 aaKnown RBP22.16■■□□□ 1.14
DDB1-215ENST00000539712 DZIP3Q86Y13 1208 aaKnown RBP22.16■■□□□ 1.14
DDB1-215ENST00000539712 ARHGAP27Q6ZUM4 889 aa22.15■■□□□ 1.14
DDB1-215ENST00000539712 ARFGEF1Q9Y6D6 1849 aa22.15■■□□□ 1.14
DDB1-215ENST00000539712 BCORQ6W2J9 1755 aa22.13■■□□□ 1.13
DDB1-215ENST00000539712 PRR5LQ6MZQ0 368 aa22.13■■□□□ 1.13
DDB1-215ENST00000539712 CCDC146Q8IYE0 955 aa22.13■■□□□ 1.13
DDB1-215ENST00000539712 ADAMTS8Q9UP79 889 aa22.13■■□□□ 1.13
DDB1-215ENST00000539712 C1QTNF8P60827 252 aa22.12■■□□□ 1.13
DDB1-215ENST00000539712 CCDC24Q8N4L8 307 aa22.12■■□□□ 1.13
DDB1-215ENST00000539712 RRP7AQ9Y3A4 280 aaKnown RBP22.12■■□□□ 1.13
DDB1-215ENST00000539712 ANKRD31Q8N7Z5 1873 aa22.11■■□□□ 1.13
DDB1-215ENST00000539712 CLEC4GQ6UXB4 293 aa22.11■■□□□ 1.13
DDB1-215ENST00000539712 NPM2Q86SE8 214 aaKnown RBP22.11■■□□□ 1.13
DDB1-215ENST00000539712 SETDB2Q96T68 719 aa22.11■■□□□ 1.13
DDB1-215ENST00000539712 LAMB4A4D0S4 1761 aa22.1■■□□□ 1.13
DDB1-215ENST00000539712 C2CD5Q86YS7 1000 aa22.1■■□□□ 1.13
DDB1-215ENST00000539712 BRIP1Q9BX63 1249 aa22.1■■□□□ 1.13
DDB1-215ENST00000539712 TRIM35Q9UPQ4 493 aa22.1■■□□□ 1.13
DDB1-215ENST00000539712 RGL2O15211 777 aa22.09■■□□□ 1.13
DDB1-215ENST00000539712 RUNDC1Q96C34 613 aa22.09■■□□□ 1.13
DDB1-215ENST00000539712 CEP350Q5VT06 3117 aa22.09■■□□□ 1.13
DDB1-215ENST00000539712 DLEC1Q9Y238 1755 aa22.09■■□□□ 1.13
DDB1-215ENST00000539712 HLFQ16534 295 aa22.08■■□□□ 1.13
DDB1-215ENST00000539712 TSPYL4Q9UJ04 414 aa22.08■■□□□ 1.13
DDB1-215ENST00000539712 H0YIN7 160 aa22.07■■□□□ 1.12
DDB1-215ENST00000539712 ZEB1P37275 1124 aaPredicted RBP22.07■■□□□ 1.12
DDB1-215ENST00000539712 WDR43Q15061 677 aaKnown RBP eCLIP22.07■■□□□ 1.12
DDB1-215ENST00000539712 ZNF526Q8TF50 670 aaPredicted RBP22.07■■□□□ 1.12
DDB1-215ENST00000539712 GPBP1L1Q9HC44 474 aaPredicted RBP22.07■■□□□ 1.12
DDB1-215ENST00000539712 BABAM1Q9NWV8 329 aa22.07■■□□□ 1.12
DDB1-215ENST00000539712 NEUROD2Q15784 382 aa22.06■■□□□ 1.12
DDB1-215ENST00000539712 TTLL6Q8N841 843 aa22.06■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms