RNA–Protein interactions for RNA: ENST00000539492.1

CD4-209, Transcript of CD4 molecule, humanhuman

TSL 4

Gene CD4, Length 579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-209ENST00000539492 SIPA1L3O60292 1781 aaPredicted RBP11.03□□□□□ -0.64
CD4-209ENST00000539492 TM4SF1P30408 202 aa11.03□□□□□ -0.64
CD4-209ENST00000539492 RBM46Q8TBY0 533 aaKnown RBP11.03□□□□□ -0.64
CD4-209ENST00000539492 TIAM2Q8IVF5 1701 aa11.02□□□□□ -0.65
CD4-209ENST00000539492 CYP19A1P11511 503 aaPredicted RBP11.02□□□□□ -0.65
CD4-209ENST00000539492 CHRNA5P30532 468 aa11.02□□□□□ -0.65
CD4-209ENST00000539492 SLC39A6Q13433 755 aa11.02□□□□□ -0.65
CD4-209ENST00000539492 USPL1Q5W0Q7 1092 aa11.02□□□□□ -0.65
CD4-209ENST00000539492 LGR6Q9HBX8 967 aa11.02□□□□□ -0.65
CD4-209ENST00000539492 RNF181Q9P0P0 153 aa11.02□□□□□ -0.65
CD4-209ENST00000539492 KDM2BQ8NHM5 1336 aa11.02□□□□□ -0.65
CD4-209ENST00000539492 ANKRD31Q8N7Z5 1873 aa11.02□□□□□ -0.65
CD4-209ENST00000539492 SCN7AQ01118 1682 aa11.01□□□□□ -0.65
CD4-209ENST00000539492 HMOX1P09601 288 aa11.01□□□□□ -0.65
CD4-209ENST00000539492 NFIXQ14938 502 aa11.01□□□□□ -0.65
CD4-209ENST00000539492 C16orf71Q8IYS4 520 aaPredicted RBP11.01□□□□□ -0.65
CD4-209ENST00000539492 VSIG10Q8N0Z9 540 aa11.01□□□□□ -0.65
CD4-209ENST00000539492 NARFQ9UHQ1 456 aa11.01□□□□□ -0.65
CD4-209ENST00000539492 ZBTB1Q9Y2K1 713 aa11.01□□□□□ -0.65
CD4-209ENST00000539492 PCNTO95613 3336 aa11.01□□□□□ -0.65
CD4-209ENST00000539492 KIF7Q2M1P5 1343 aa11.01□□□□□ -0.65
CD4-209ENST00000539492 ZC3H4Q9UPT8 1303 aaKnown RBP11.01□□□□□ -0.65
CD4-209ENST00000539492 CACNA1SQ13698 1873 aa11□□□□□ -0.65
CD4-209ENST00000539492 DIAPH1O60610 1272 aaKnown RBP11□□□□□ -0.65
CD4-209ENST00000539492 FSTL1Q12841 308 aa11□□□□□ -0.65
CD4-209ENST00000539492 MTHFSDQ2M296 383 aaKnown RBP11□□□□□ -0.65
CD4-209ENST00000539492 DNAJC5GQ8N7S2 189 aa11□□□□□ -0.65
CD4-209ENST00000539492 CCER1Q8TC90 406 aaPredicted RBP11□□□□□ -0.65
CD4-209ENST00000539492 FER1L6Q2WGJ9 1857 aa11□□□□□ -0.65
CD4-209ENST00000539492 COL3A1P02461 1466 aaPredicted RBP10.99□□□□□ -0.65
CD4-209ENST00000539492 COL11A2P13942 1736 aaPredicted RBP10.98□□□□□ -0.65
CD4-209ENST00000539492 STARD3NLO95772 234 aa10.98□□□□□ -0.65
CD4-209ENST00000539492 SERPINB2P05120 415 aa10.98□□□□□ -0.65
CD4-209ENST00000539492 TTC5Q8N0Z6 440 aa10.98□□□□□ -0.65
CD4-209ENST00000539492 BCL2L12Q9HB09 334 aa10.98□□□□□ -0.65
CD4-209ENST00000539492 NPC1L1Q9UHC9 1359 aa10.98□□□□□ -0.65
CD4-209ENST00000539492 BCORQ6W2J9 1755 aa10.98□□□□□ -0.65
CD4-209ENST00000539492 ARFGEF2Q9Y6D5 1785 aa10.98□□□□□ -0.65
CD4-209ENST00000539492 A0A087WZG4 1122 aa10.97□□□□□ -0.65
CD4-209ENST00000539492 PER1O15534 1290 aaPredicted RBP10.97□□□□□ -0.65
CD4-209ENST00000539492 LMNB1P20700 586 aa10.97□□□□□ -0.65
CD4-209ENST00000539492 RASSF7Q02833 373 aa10.97□□□□□ -0.65
CD4-209ENST00000539492 CC2D1BQ5T0F9 858 aaKnown RBP10.97□□□□□ -0.65
CD4-209ENST00000539492 TTLL6Q8N841 843 aa10.97□□□□□ -0.65
CD4-209ENST00000539492 RRAGCQ9HB90 399 aa10.97□□□□□ -0.65
CD4-209ENST00000539492 CARMIL3Q8ND23 1372 aa10.96□□□□□ -0.65
CD4-209ENST00000539492 HEG1Q9ULI3 1381 aa10.96□□□□□ -0.65
CD4-209ENST00000539492 CANXP27824 592 aaKnown RBP10.96□□□□□ -0.65
CD4-209ENST00000539492 EIF5P55010 431 aaKnown RBP10.96□□□□□ -0.65
CD4-209ENST00000539492 C2CD5Q86YS7 1000 aa10.96□□□□□ -0.65
CD4-209ENST00000539492 SMC1BQ8NDV3 1235 aa10.96□□□□□ -0.65
CD4-209ENST00000539492 GAS2L2Q8NHY3 880 aa10.96□□□□□ -0.65
CD4-209ENST00000539492 KLRG1Q96E93 195 aa10.96□□□□□ -0.65
CD4-209ENST00000539492 SLX4Q8IY92 1834 aa10.95□□□□□ -0.66
CD4-209ENST00000539492 H0YIN7 160 aa10.95□□□□□ -0.66
CD4-209ENST00000539492 TEFQ10587 303 aa10.95□□□□□ -0.66
CD4-209ENST00000539492 ZNF496Q96IT1 587 aaPredicted RBP10.95□□□□□ -0.66
CD4-209ENST00000539492 TEX13AQ9BXU3 409 aaPredicted RBP10.95□□□□□ -0.66
CD4-209ENST00000539492 PDZRN3Q9UPQ7 1066 aa10.95□□□□□ -0.66
CD4-209ENST00000539492 GLTPD2A6NH11 291 aa10.94□□□□□ -0.66
CD4-209ENST00000539492 GNAT3A8MTJ3 354 aa10.94□□□□□ -0.66
CD4-209ENST00000539492 ZNF790Q6PG37 636 aa10.94□□□□□ -0.66
CD4-209ENST00000539492 BICDL1Q6ZP65 573 aa10.94□□□□□ -0.66
CD4-209ENST00000539492 JMYQ8N9B5 988 aa10.94□□□□□ -0.66
CD4-209ENST00000539492 NFKBIEO00221 500 aa10.93□□□□□ -0.66
CD4-209ENST00000539492 U2SURPO15042 1029 aaKnown RBP10.93□□□□□ -0.66
CD4-209ENST00000539492 IL6STP40189 918 aaPredicted RBP10.93□□□□□ -0.66
CD4-209ENST00000539492 PRELPP51888 382 aa10.93□□□□□ -0.66
CD4-209ENST00000539492 HTRA3P83110 453 aa10.93□□□□□ -0.66
CD4-209ENST00000539492 TBC1D9BQ66K14 1250 aa10.93□□□□□ -0.66
CD4-209ENST00000539492 IL17REQ8NFR9 667 aa10.93□□□□□ -0.66
CD4-209ENST00000539492 CEMIPQ8WUJ3 1361 aa10.92□□□□□ -0.66
CD4-209ENST00000539492 VEGFAP15692 232 aaPredicted RBP10.92□□□□□ -0.66
CD4-209ENST00000539492 PDE6BP35913 854 aa10.92□□□□□ -0.66
CD4-209ENST00000539492 FMNL2Q96PY5 1086 aa10.92□□□□□ -0.66
CD4-209ENST00000539492 BRIP1Q9BX63 1249 aa10.92□□□□□ -0.66
CD4-209ENST00000539492 PRR5LQ6MZQ0 368 aa10.91□□□□□ -0.66
CD4-209ENST00000539492 NPM2Q86SE8 214 aaKnown RBP10.91□□□□□ -0.66
CD4-209ENST00000539492 ZNF622Q969S3 477 aaKnown RBP eCLIP10.91□□□□□ -0.66
CD4-209ENST00000539492 TBC1D2BQ9UPU7 963 aa10.91□□□□□ -0.66
CD4-209ENST00000539492 ZNF330Q9Y3S2 320 aaPredicted RBP10.91□□□□□ -0.66
CD4-209ENST00000539492 SCN4AP35499 1836 aa10.91□□□□□ -0.66
CD4-209ENST00000539492 DLG5Q8TDM6 1919 aa10.9□□□□□ -0.66
CD4-209ENST00000539492 CAMTA2O94983 1202 aa10.9□□□□□ -0.66
CD4-209ENST00000539492 CNBD1Q8NA66 436 aa10.9□□□□□ -0.66
CD4-209ENST00000539492 SETDB2Q96T68 719 aa10.9□□□□□ -0.66
CD4-209ENST00000539492 LTBP3Q9NS15 1303 aa10.89□□□□□ -0.67
CD4-209ENST00000539492 BTBD11A6QL63 1104 aa10.89□□□□□ -0.67
CD4-209ENST00000539492 NPHP1O15259 732 aa10.89□□□□□ -0.67
CD4-209ENST00000539492 C21orf2O43822 256 aa10.89□□□□□ -0.67
CD4-209ENST00000539492 A1BGP04217 495 aa10.89□□□□□ -0.67
CD4-209ENST00000539492 PRKAR2BP31323 418 aa10.89□□□□□ -0.67
CD4-209ENST00000539492 ST5P78524 1137 aa10.89□□□□□ -0.67
CD4-209ENST00000539492 CNGB1Q14028 1251 aaPredicted RBP10.89□□□□□ -0.67
CD4-209ENST00000539492 DPY19L2Q6NUT2 758 aa10.89□□□□□ -0.67
CD4-209ENST00000539492 CNKSR1Q969H4 720 aa10.89□□□□□ -0.67
CD4-209ENST00000539492 CFAP53Q96M91 514 aa10.89□□□□□ -0.67
CD4-209ENST00000539492 RSPH6AQ9H0K4 717 aa10.89□□□□□ -0.67
CD4-209ENST00000539492 TAOK3Q9H2K8 898 aa10.89□□□□□ -0.67
CD4-209ENST00000539492 LAMB4A4D0S4 1761 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms