RNA–Protein interactions for RNA: ENST00000539320.2

SCARB1-206, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 720 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-206ENST00000539320 DDR1Q08345 913 aa29.63■■■□□ 2.33
SCARB1-206ENST00000539320 STARD3NLO95772 234 aa29.62■■■□□ 2.33
SCARB1-206ENST00000539320 USPL1Q5W0Q7 1092 aa29.62■■■□□ 2.33
SCARB1-206ENST00000539320 NARFQ9UHQ1 456 aa29.6■■■□□ 2.33
SCARB1-206ENST00000539320 A0A0G2JLW4 131 aa29.59■■■□□ 2.33
SCARB1-206ENST00000539320 CANXP27824 592 aaKnown RBP29.59■■■□□ 2.33
SCARB1-206ENST00000539320 RTF1Q92541 710 aaKnown RBP29.59■■■□□ 2.33
SCARB1-206ENST00000539320 FMNL2Q96PY5 1086 aa29.59■■■□□ 2.33
SCARB1-206ENST00000539320 BTBD11A6QL63 1104 aa29.58■■■□□ 2.33
SCARB1-206ENST00000539320 POLRMTO00411 1230 aaKnown RBP29.58■■■□□ 2.33
SCARB1-206ENST00000539320 ADCY9O60503 1353 aa29.58■■■□□ 2.33
SCARB1-206ENST00000539320 DPEP1P16444 411 aa29.58■■■□□ 2.33
SCARB1-206ENST00000539320 ATP10DQ9P241 1426 aa29.58■■■□□ 2.33
SCARB1-206ENST00000539320 TEX13AQ9BXU3 409 aaPredicted RBP29.57■■■□□ 2.32
SCARB1-206ENST00000539320 BRCA1P38398 1863 aaKnown RBP29.57■■■□□ 2.32
SCARB1-206ENST00000539320 TM4SF1P30408 202 aa29.56■■■□□ 2.32
SCARB1-206ENST00000539320 BCS1LQ9Y276 419 aa29.56■■■□□ 2.32
SCARB1-206ENST00000539320 EIF5P55010 431 aaKnown RBP29.55■■■□□ 2.32
SCARB1-206ENST00000539320 MCM10Q7L590 875 aa29.55■■■□□ 2.32
SCARB1-206ENST00000539320 KCNQ3O43525 872 aa29.54■■■□□ 2.32
SCARB1-206ENST00000539320 BCL2L12Q9HB09 334 aa29.54■■■□□ 2.32
SCARB1-206ENST00000539320 A0A087WZG4 1122 aa29.53■■■□□ 2.32
SCARB1-206ENST00000539320 HTATSF1O43719 755 aaKnown RBP29.53■■■□□ 2.32
SCARB1-206ENST00000539320 NFIXQ14938 502 aa29.53■■■□□ 2.32
SCARB1-206ENST00000539320 SCN7AQ01118 1682 aa29.53■■■□□ 2.32
SCARB1-206ENST00000539320 GIGYF1O75420 1035 aaPredicted RBP29.52■■■□□ 2.32
SCARB1-206ENST00000539320 NEFMP07197 916 aa29.52■■■□□ 2.32
SCARB1-206ENST00000539320 DCTN1Q14203 1278 aa29.51■■■□□ 2.31
SCARB1-206ENST00000539320 NRXN2Q9P2S2 1712 aa29.51■■■□□ 2.31
SCARB1-206ENST00000539320 AFDNP55196 1824 aaKnown RBP29.5■■■□□ 2.31
SCARB1-206ENST00000539320 IL6STP40189 918 aaPredicted RBP29.49■■■□□ 2.31
SCARB1-206ENST00000539320 ZNF330Q9Y3S2 320 aaPredicted RBP29.49■■■□□ 2.31
SCARB1-206ENST00000539320 ARFGEF1Q9Y6D6 1849 aa29.48■■■□□ 2.31
SCARB1-206ENST00000539320 KCNA3P22001 575 aa29.48■■■□□ 2.31
SCARB1-206ENST00000539320 C1QTNF8P60827 252 aa29.47■■■□□ 2.31
SCARB1-206ENST00000539320 RALBP1Q15311 655 aa29.47■■■□□ 2.31
SCARB1-206ENST00000539320 PIM2Q9P1W9 311 aa29.47■■■□□ 2.31
SCARB1-206ENST00000539320 DLG5Q8TDM6 1919 aa29.46■■■□□ 2.31
SCARB1-206ENST00000539320 A1BGP04217 495 aa29.46■■■□□ 2.31
SCARB1-206ENST00000539320 SERPINB2P05120 415 aa29.45■■■□□ 2.31
SCARB1-206ENST00000539320 CHRNA5P30532 468 aa29.45■■■□□ 2.31
SCARB1-206ENST00000539320 PLEKHF1Q96S99 279 aa29.45■■■□□ 2.31
SCARB1-206ENST00000539320 SNRPA1P09661 255 aaKnown RBP29.44■■■□□ 2.3
SCARB1-206ENST00000539320 DALRD3Q5D0E6 543 aaKnown RBP29.44■■■□□ 2.3
SCARB1-206ENST00000539320 NPM2Q86SE8 214 aaKnown RBP29.44■■■□□ 2.3
SCARB1-206ENST00000539320 GPBP1L1Q9HC44 474 aaPredicted RBP29.43■■■□□ 2.3
SCARB1-206ENST00000539320 TBC1D2BQ9UPU7 963 aa29.43■■■□□ 2.3
SCARB1-206ENST00000539320 MAPK8IP3Q9UPT6 1336 aa29.43■■■□□ 2.3
SCARB1-206ENST00000539320 DDX10Q13206 875 aaKnown RBP29.42■■■□□ 2.3
SCARB1-206ENST00000539320 TAF7Q15545 349 aaPredicted RBP29.42■■■□□ 2.3
SCARB1-206ENST00000539320 NFE2L2Q16236 605 aa29.42■■■□□ 2.3
SCARB1-206ENST00000539320 BICDL1Q6ZP65 573 aa29.42■■■□□ 2.3
SCARB1-206ENST00000539320 ARHGAP27Q6ZUM4 889 aa29.42■■■□□ 2.3
SCARB1-206ENST00000539320 PNNQ9H307 717 aaKnown RBP29.42■■■□□ 2.3
SCARB1-206ENST00000539320 USP16Q9Y5T5 823 aa29.42■■■□□ 2.3
SCARB1-206ENST00000539320 BCORQ6W2J9 1755 aa29.41■■■□□ 2.3
SCARB1-206ENST00000539320 PRAMEF22A3QJZ6 481 aa29.41■■■□□ 2.3
SCARB1-206ENST00000539320 ZNF526Q8TF50 670 aaPredicted RBP29.41■■■□□ 2.3
SCARB1-206ENST00000539320 CARMIL3Q8ND23 1372 aa29.4■■■□□ 2.3
SCARB1-206ENST00000539320 TBC1D9BQ66K14 1250 aa29.4■■■□□ 2.3
SCARB1-206ENST00000539320 CAMTA2O94983 1202 aa29.39■■■□□ 2.3
SCARB1-206ENST00000539320 KDM3BQ7LBC6 1761 aa29.39■■■□□ 2.29
SCARB1-206ENST00000539320 DLEC1Q9Y238 1755 aa29.39■■■□□ 2.29
SCARB1-206ENST00000539320 PIP4K2AP48426 406 aaPredicted RBP29.38■■■□□ 2.29
SCARB1-206ENST00000539320 LAMB4A4D0S4 1761 aa29.38■■■□□ 2.29
SCARB1-206ENST00000539320 DZIP3Q86Y13 1208 aaKnown RBP29.37■■■□□ 2.29
SCARB1-206ENST00000539320 PNISRQ8TF01 805 aaKnown RBP29.37■■■□□ 2.29
SCARB1-206ENST00000539320 MYBBP1AQ9BQG0 1328 aaKnown RBP29.37■■■□□ 2.29
SCARB1-206ENST00000539320 MIS18AQ9NYP9 233 aa29.36■■■□□ 2.29
SCARB1-206ENST00000539320 SENP3-EIF4A1A0A087X0R7 540 aa29.34■■■□□ 2.29
SCARB1-206ENST00000539320 C2CD5Q86YS7 1000 aa29.33■■■□□ 2.29
SCARB1-206ENST00000539320 THUMPD2Q9BTF0 503 aaKnown RBP29.33■■■□□ 2.29
SCARB1-206ENST00000539320 ANKRD31Q8N7Z5 1873 aa29.33■■■□□ 2.29
SCARB1-206ENST00000539320 NBPF26B4DH59 902 aa29.31■■■□□ 2.28
SCARB1-206ENST00000539320 PRR5LQ6MZQ0 368 aa29.31■■■□□ 2.28
SCARB1-206ENST00000539320 NBPF10Q6P3W6 841 aaKnown RBP29.31■■■□□ 2.28
SCARB1-206ENST00000539320 NBPF15Q8N660 670 aa29.31■■■□□ 2.28
SCARB1-206ENST00000539320 SETDB2Q96T68 719 aa29.31■■■□□ 2.28
SCARB1-206ENST00000539320 C9orf131Q5VYM1 1079 aa29.3■■■□□ 2.28
SCARB1-206ENST00000539320 H0YIN7 160 aa29.29■■■□□ 2.28
SCARB1-206ENST00000539320 CNBD1Q8NA66 436 aa29.29■■■□□ 2.28
SCARB1-206ENST00000539320 ZNF652Q9Y2D9 606 aa29.29■■■□□ 2.28
SCARB1-206ENST00000539320 COL11A2P13942 1736 aaPredicted RBP29.28■■■□□ 2.28
SCARB1-206ENST00000539320 TTLL6Q8N841 843 aa29.28■■■□□ 2.28
SCARB1-206ENST00000539320 BRIP1Q9BX63 1249 aa29.28■■■□□ 2.28
SCARB1-206ENST00000539320 PDZRN3Q9UPQ7 1066 aa29.28■■■□□ 2.28
SCARB1-206ENST00000539320 NPHP1O15259 732 aa29.27■■■□□ 2.28
SCARB1-206ENST00000539320 EIF4A1P60842 406 aaKnown RBP29.27■■■□□ 2.28
SCARB1-206ENST00000539320 CLEC4GQ6UXB4 293 aa29.27■■■□□ 2.28
SCARB1-206ENST00000539320 PDE6BP35913 854 aa29.26■■■□□ 2.27
SCARB1-206ENST00000539320 CCDC24Q8N4L8 307 aa29.26■■■□□ 2.27
SCARB1-206ENST00000539320 RNF181Q9P0P0 153 aa29.26■■■□□ 2.27
SCARB1-206ENST00000539320 RGL2O15211 777 aa29.25■■■□□ 2.27
SCARB1-206ENST00000539320 ST5P78524 1137 aa29.25■■■□□ 2.27
SCARB1-206ENST00000539320 KIF3CO14782 793 aa29.24■■■□□ 2.27
SCARB1-206ENST00000539320 RIPK4P57078 832 aa29.24■■■□□ 2.27
SCARB1-206ENST00000539320 RASSF7Q02833 373 aa29.23■■■□□ 2.27
SCARB1-206ENST00000539320 LMOD3Q0VAK6 560 aa29.23■■■□□ 2.27
SCARB1-206ENST00000539320 SBF1O95248 1867 aa29.23■■■□□ 2.27
SCARB1-206ENST00000539320 TMPOP42166 694 aaKnown RBP29.22■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 98.9 ms