RNA–Protein interactions for RNA: ENST00000539194.5

PROM1-219, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PROM1, Length 3,884 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-219ENST00000539194 TMX3Q96JJ7 454 aa8.52□□□□□ -1.05
PROM1-219ENST00000539194 LRRCC1Q9C099 1032 aa8.52□□□□□ -1.05
PROM1-219ENST00000539194 PLEKHG2Q9H7P9 1386 aa8.52□□□□□ -1.05
PROM1-219ENST00000539194 IP6K1Q92551 441 aa8.52□□□□□ -1.05
PROM1-219ENST00000539194 SETD1BQ9UPS6 1966 aaKnown RBP8.52□□□□□ -1.05
PROM1-219ENST00000539194 HMMRO75330 724 aa8.52□□□□□ -1.05
PROM1-219ENST00000539194 GNAI3P08754 354 aa8.52□□□□□ -1.05
PROM1-219ENST00000539194 TMEM87AQ8NBN3 555 aa8.52□□□□□ -1.05
PROM1-219ENST00000539194 EXOC6BQ9Y2D4 811 aa8.52□□□□□ -1.05
PROM1-219ENST00000539194 XIRP1Q702N8 1843 aaKnown RBP8.51□□□□□ -1.05
PROM1-219ENST00000539194 SRCIN1Q9C0H9 1055 aa8.51□□□□□ -1.05
PROM1-219ENST00000539194 PHAXQ9H814 394 aaKnown RBP8.51□□□□□ -1.05
PROM1-219ENST00000539194 TMEM94Q12767 1356 aa8.51□□□□□ -1.05
PROM1-219ENST00000539194 TMEM63CQ9P1W3 806 aa8.51□□□□□ -1.05
PROM1-219ENST00000539194 ESPNB1AK53 854 aa8.51□□□□□ -1.05
PROM1-219ENST00000539194 HS1BP3Q53T59 392 aa8.51□□□□□ -1.05
PROM1-219ENST00000539194 TSHZ3Q63HK5 1081 aa8.51□□□□□ -1.05
PROM1-219ENST00000539194 LSG1Q9H089 658 aaKnown RBP8.51□□□□□ -1.05
PROM1-219ENST00000539194 FOXD4L1Q9NU39 408 aa8.51□□□□□ -1.05
PROM1-219ENST00000539194 LRRFIP2Q9Y608 721 aaKnown RBP8.51□□□□□ -1.05
PROM1-219ENST00000539194 NBPF6Q5VWK0 638 aa8.5□□□□□ -1.05
PROM1-219ENST00000539194 NBPF4Q96M43 638 aa8.5□□□□□ -1.05
PROM1-219ENST00000539194 RBSNQ9H1K0 784 aa8.5□□□□□ -1.05
PROM1-219ENST00000539194 LRP10Q7Z4F1 713 aa8.5□□□□□ -1.05
PROM1-219ENST00000539194 CHAMP1Q96JM3 812 aa8.5□□□□□ -1.05
PROM1-219ENST00000539194 NUTM2FA1L443 756 aa8.5□□□□□ -1.05
PROM1-219ENST00000539194 CCDC173Q0VFZ6 552 aa8.5□□□□□ -1.05
PROM1-219ENST00000539194 KAZALD1Q96I82 304 aa8.5□□□□□ -1.05
PROM1-219ENST00000539194 RAD50Q92878 1312 aa8.49□□□□□ -1.05
PROM1-219ENST00000539194 RAB11FIP3O75154 756 aa8.49□□□□□ -1.05
PROM1-219ENST00000539194 MCM2P49736 904 aa8.49□□□□□ -1.05
PROM1-219ENST00000539194 EID1Q9Y6B2 187 aa8.49□□□□□ -1.05
PROM1-219ENST00000539194 SGSM2O43147 1006 aa8.49□□□□□ -1.05
PROM1-219ENST00000539194 ST18O60284 1047 aa8.49□□□□□ -1.05
PROM1-219ENST00000539194 PLPPR3Q6T4P5 718 aa8.49□□□□□ -1.05
PROM1-219ENST00000539194 THEMISQ8N1K5 641 aaPredicted RBP8.49□□□□□ -1.05
PROM1-219ENST00000539194 KLHL34Q8N239 644 aa8.49□□□□□ -1.05
PROM1-219ENST00000539194 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.49□□□□□ -1.05
PROM1-219ENST00000539194 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.49□□□□□ -1.05
PROM1-219ENST00000539194 COL15A1P39059 1388 aa8.49□□□□□ -1.05
PROM1-219ENST00000539194 NPHP4O75161 1426 aaPredicted RBP8.49□□□□□ -1.05
PROM1-219ENST00000539194 NBPF7P0C2Y1 421 aaPredicted RBP8.49□□□□□ -1.05
PROM1-219ENST00000539194 ST3GAL1Q11201 340 aa8.49□□□□□ -1.05
PROM1-219ENST00000539194 PDIA6Q15084 440 aa8.49□□□□□ -1.05
PROM1-219ENST00000539194 RTF1Q92541 710 aaKnown RBP8.49□□□□□ -1.05
PROM1-219ENST00000539194 LGR6Q9HBX8 967 aa8.49□□□□□ -1.05
PROM1-219ENST00000539194 PRIM1P49642 420 aaKnown RBP8.48□□□□□ -1.05
PROM1-219ENST00000539194 KDM6AO15550 1401 aaPredicted RBP8.48□□□□□ -1.05
PROM1-219ENST00000539194 KCNQ3O43525 872 aa8.48□□□□□ -1.05
PROM1-219ENST00000539194 NLRP6P59044 892 aa8.48□□□□□ -1.05
PROM1-219ENST00000539194 MCTP1Q6DN14 999 aa8.48□□□□□ -1.05
PROM1-219ENST00000539194 ABCA3Q99758 1704 aa8.48□□□□□ -1.05
PROM1-219ENST00000539194 LRSAM1Q6UWE0 723 aa8.47□□□□□ -1.05
PROM1-219ENST00000539194 ZNF500O60304 480 aaPredicted RBP8.47□□□□□ -1.05
PROM1-219ENST00000539194 AMPHP49418 695 aa8.47□□□□□ -1.05
PROM1-219ENST00000539194 PPP1R42Q7Z4L9 355 aa8.47□□□□□ -1.05
PROM1-219ENST00000539194 RHPN1Q8TCX5 695 aa8.47□□□□□ -1.05
PROM1-219ENST00000539194 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.47□□□□□ -1.05
PROM1-219ENST00000539194 CASC1Q6TDU7 716 aa8.47□□□□□ -1.05
PROM1-219ENST00000539194 ARHGEF25Q86VW2 580 aa8.47□□□□□ -1.05
PROM1-219ENST00000539194 SNX14Q9Y5W7 946 aa8.47□□□□□ -1.05
PROM1-219ENST00000539194 NWD2Q9ULI1 1742 aa8.47□□□□□ -1.05
PROM1-219ENST00000539194 NASPP49321 788 aaPredicted RBP8.46□□□□□ -1.05
PROM1-219ENST00000539194 FKBP5Q13451 457 aaPredicted RBP8.46□□□□□ -1.05
PROM1-219ENST00000539194 AKAP4Q5JQC9 854 aa8.46□□□□□ -1.05
PROM1-219ENST00000539194 SLC4A10Q6U841 1118 aa8.46□□□□□ -1.05
PROM1-219ENST00000539194 RASEFQ8IZ41 740 aa8.46□□□□□ -1.05
PROM1-219ENST00000539194 FUCA2Q9BTY2 467 aa8.46□□□□□ -1.05
PROM1-219ENST00000539194 STK31Q9BXU1 1019 aa8.46□□□□□ -1.05
PROM1-219ENST00000539194 ESF1Q9H501 851 aaKnown RBP8.46□□□□□ -1.05
PROM1-219ENST00000539194 NOL7Q9UMY1 257 aaKnown RBP8.46□□□□□ -1.05
PROM1-219ENST00000539194 DDX49Q9Y6V7 483 aaKnown RBP8.46□□□□□ -1.05
PROM1-219ENST00000539194 TTC41PQ6P2S7 1318 aa8.46□□□□□ -1.06
PROM1-219ENST00000539194 NGDNQ8NEJ9 315 aaKnown RBP8.46□□□□□ -1.06
PROM1-219ENST00000539194 SPEF2Q9C093 1822 aa8.46□□□□□ -1.06
PROM1-219ENST00000539194 CHPF2Q9P2E5 772 aa8.46□□□□□ -1.06
PROM1-219ENST00000539194 NEK4P51957 841 aa8.45□□□□□ -1.06
PROM1-219ENST00000539194 RUFY3Q7L099 469 aa8.45□□□□□ -1.06
PROM1-219ENST00000539194 GIGYF1O75420 1035 aaPredicted RBP8.45□□□□□ -1.06
PROM1-219ENST00000539194 TERF1P54274 439 aa8.45□□□□□ -1.06
PROM1-219ENST00000539194 COL9A3Q14050 684 aaPredicted RBP8.45□□□□□ -1.06
PROM1-219ENST00000539194 RBM27Q9P2N5 1060 aaKnown RBP8.45□□□□□ -1.06
PROM1-219ENST00000539194 MED23Q9ULK4 1368 aa8.45□□□□□ -1.06
PROM1-219ENST00000539194 NECTIN1Q15223 517 aa8.45□□□□□ -1.06
PROM1-219ENST00000539194 CAVIN1Q6NZI2 390 aaKnown RBP8.45□□□□□ -1.06
PROM1-219ENST00000539194 ALDH8A1Q9H2A2 487 aaPredicted RBP8.45□□□□□ -1.06
PROM1-219ENST00000539194 PHF8Q9UPP1 1060 aa8.45□□□□□ -1.06
PROM1-219ENST00000539194 TOGARAM1Q9Y4F4 1720 aa8.44□□□□□ -1.06
PROM1-219ENST00000539194 UBTFL1P0CB47 393 aaPredicted RBP8.44□□□□□ -1.06
PROM1-219ENST00000539194 HDGFL1Q5TGJ6 251 aa8.44□□□□□ -1.06
PROM1-219ENST00000539194 ZSCAN30Q86W11 494 aa8.44□□□□□ -1.06
PROM1-219ENST00000539194 USHBP1Q8N6Y0 703 aa8.44□□□□□ -1.06
PROM1-219ENST00000539194 ABTB2Q8N961 1025 aa8.44□□□□□ -1.06
PROM1-219ENST00000539194 HYPKQ9NX55 129 aa8.44□□□□□ -1.06
PROM1-219ENST00000539194 RNMTO43148 476 aaKnown RBP8.44□□□□□ -1.06
PROM1-219ENST00000539194 PRPF40AO75400 957 aaKnown RBP8.44□□□□□ -1.06
PROM1-219ENST00000539194 DNAAF4Q8WXU2 420 aa8.44□□□□□ -1.06
PROM1-219ENST00000539194 KIF1BPQ96EK5 621 aa8.44□□□□□ -1.06
PROM1-219ENST00000539194 APBB1O00213 710 aa8.44□□□□□ -1.06
PROM1-219ENST00000539194 PROSER3Q2NL68 480 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms