RNA–Protein interactions for RNA: ENST00000539176.1

KLHL42-202, Transcript of kelch like family member 42, humanhuman

TSL 3

Gene KLHL42, Length 1,894 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL42-202ENST00000539176 FMNL2Q96PY5 1086 aa32.08■■■□□ 2.73
KLHL42-202ENST00000539176 PTPRCP08575 1304 aa32.08■■■□□ 2.73
KLHL42-202ENST00000539176 UBR2Q8IWV8 1755 aa32.08■■■□□ 2.73
KLHL42-202ENST00000539176 A0A0G2JS52 829 aa32.08■■■□□ 2.73
KLHL42-202ENST00000539176 RGS3P49796 1198 aa32.08■■■□□ 2.73
KLHL42-202ENST00000539176 MYT1Q01538 1121 aa32.08■■■□□ 2.73
KLHL42-202ENST00000539176 PHAXQ9H814 394 aaKnown RBP32.08■■■□□ 2.73
KLHL42-202ENST00000539176 ZBTB40Q9NUA8 1239 aa32.08■■■□□ 2.73
KLHL42-202ENST00000539176 FLIIQ13045 1269 aa32.07■■■□□ 2.72
KLHL42-202ENST00000539176 KCPQ6ZWJ8 1503 aa32.06■■■□□ 2.72
KLHL42-202ENST00000539176 F6X3S4 739 aa32.05■■■□□ 2.72
KLHL42-202ENST00000539176 PROSER3Q2NL68 480 aa32.05■■■□□ 2.72
KLHL42-202ENST00000539176 SYTL4Q96C24 671 aaPredicted RBP32.05■■■□□ 2.72
KLHL42-202ENST00000539176 IPO9Q96P70 1041 aaKnown RBP32.05■■■□□ 2.72
KLHL42-202ENST00000539176 PTCD1O75127 700 aaKnown RBP32.04■■■□□ 2.72
KLHL42-202ENST00000539176 ASAP1Q9ULH1 1129 aa32.04■■■□□ 2.72
KLHL42-202ENST00000539176 USP16Q9Y5T5 823 aa32.04■■■□□ 2.72
KLHL42-202ENST00000539176 SNRPA1P09661 255 aaKnown RBP32.03■■■□□ 2.72
KLHL42-202ENST00000539176 PRIM1P49642 420 aaKnown RBP32.03■■■□□ 2.72
KLHL42-202ENST00000539176 FKBP5Q13451 457 aaPredicted RBP32.03■■■□□ 2.72
KLHL42-202ENST00000539176 ACSBG1Q96GR2 724 aa32.03■■■□□ 2.72
KLHL42-202ENST00000539176 GJD4Q96KN9 370 aaPredicted RBP32.03■■■□□ 2.72
KLHL42-202ENST00000539176 ATRNO75882 1429 aa32.03■■■□□ 2.72
KLHL42-202ENST00000539176 BCL9O00512 1426 aa32.02■■■□□ 2.72
KLHL42-202ENST00000539176 C8orf34Q49A92 452 aa32.01■■■□□ 2.72
KLHL42-202ENST00000539176 THSD7AQ9UPZ6 1657 aa32.01■■■□□ 2.72
KLHL42-202ENST00000539176 ERICH6Q7L0X2 663 aa32■■■□□ 2.71
KLHL42-202ENST00000539176 ATG3Q9NT62 314 aa32■■■□□ 2.71
KLHL42-202ENST00000539176 DBF4Q9UBU7 674 aaPredicted RBP32■■■□□ 2.71
KLHL42-202ENST00000539176 ANP32EQ9BTT0 268 aa31.99■■■□□ 2.71
KLHL42-202ENST00000539176 TRPC5Q9UL62 973 aaPredicted RBP31.99■■■□□ 2.71
KLHL42-202ENST00000539176 LAMB4A4D0S4 1761 aa31.99■■■□□ 2.71
KLHL42-202ENST00000539176 SLC4A10Q6U841 1118 aa31.99■■■□□ 2.71
KLHL42-202ENST00000539176 CHMP4AQ9BY43 222 aa31.99■■■□□ 2.71
KLHL42-202ENST00000539176 PIP4K2AP48426 406 aaPredicted RBP31.98■■■□□ 2.71
KLHL42-202ENST00000539176 PDIA6Q15084 440 aa31.97■■■□□ 2.71
KLHL42-202ENST00000539176 INTS3Q68E01 1043 aaKnown RBP31.97■■■□□ 2.71
KLHL42-202ENST00000539176 PDZRN3Q9UPQ7 1066 aa31.97■■■□□ 2.71
KLHL42-202ENST00000539176 ZBTB7BO15156 539 aaPredicted RBP31.95■■■□□ 2.71
KLHL42-202ENST00000539176 QTRT2Q9H974 415 aaKnown RBP31.95■■■□□ 2.71
KLHL42-202ENST00000539176 MYL6BP14649 208 aa31.95■■■□□ 2.7
KLHL42-202ENST00000539176 DDX21Q9NR30 783 aaKnown RBP eCLIP31.95■■■□□ 2.7
KLHL42-202ENST00000539176 NOP58Q9Y2X3 529 aaKnown RBP31.95■■■□□ 2.7
KLHL42-202ENST00000539176 SMC5Q8IY18 1101 aa31.93■■■□□ 2.7
KLHL42-202ENST00000539176 RBM42Q9BTD8 480 aaKnown RBP31.93■■■□□ 2.7
KLHL42-202ENST00000539176 FAM182BQ5T319 152 aa31.92■■■□□ 2.7
KLHL42-202ENST00000539176 HYPKQ9NX55 129 aa31.91■■■□□ 2.7
KLHL42-202ENST00000539176 KCNQ2O43526 872 aa31.91■■■□□ 2.7
KLHL42-202ENST00000539176 C1orf115Q9H7X2 142 aa31.91■■■□□ 2.7
KLHL42-202ENST00000539176 AIMP1Q12904 312 aaKnown RBP31.9■■■□□ 2.7
KLHL42-202ENST00000539176 NPM2Q86SE8 214 aaKnown RBP31.89■■■□□ 2.7
KLHL42-202ENST00000539176 ADCY9O60503 1353 aa31.88■■■□□ 2.69
KLHL42-202ENST00000539176 PI4KAP2A4QPH2 592 aa31.88■■■□□ 2.69
KLHL42-202ENST00000539176 PI4KAP1Q8N8J0 262 aa31.88■■■□□ 2.69
KLHL42-202ENST00000539176 DDRGK1Q96HY6 314 aa31.88■■■□□ 2.69
KLHL42-202ENST00000539176 SEPT12Q8IYM1 358 aa31.87■■■□□ 2.69
KLHL42-202ENST00000539176 SLC4A9Q96Q91 983 aa31.87■■■□□ 2.69
KLHL42-202ENST00000539176 A1BGP04217 495 aa31.86■■■□□ 2.69
KLHL42-202ENST00000539176 CCT4P50991 539 aaKnown RBP31.86■■■□□ 2.69
KLHL42-202ENST00000539176 DNAJC10Q8IXB1 793 aa31.86■■■□□ 2.69
KLHL42-202ENST00000539176 LRP10Q7Z4F1 713 aa31.86■■■□□ 2.69
KLHL42-202ENST00000539176 ZBTB47Q9UFB7 747 aaPredicted RBP31.86■■■□□ 2.69
KLHL42-202ENST00000539176 N4BP2Q86UW6 1770 aaPredicted RBP31.86■■■□□ 2.69
KLHL42-202ENST00000539176 NBPF26B4DH59 902 aa31.85■■■□□ 2.69
KLHL42-202ENST00000539176 ONECUT3O60422 494 aaPredicted RBP31.85■■■□□ 2.69
KLHL42-202ENST00000539176 NBPF14Q5TI25 921 aa31.85■■■□□ 2.69
KLHL42-202ENST00000539176 NBPF10Q6P3W6 841 aaKnown RBP31.85■■■□□ 2.69
KLHL42-202ENST00000539176 NBPF15Q8N660 670 aa31.85■■■□□ 2.69
KLHL42-202ENST00000539176 XAGE3Q8WTP9 111 aa31.85■■■□□ 2.69
KLHL42-202ENST00000539176 MEIS3Q99687 375 aa31.85■■■□□ 2.69
KLHL42-202ENST00000539176 DNAAF4Q8WXU2 420 aa31.84■■■□□ 2.69
KLHL42-202ENST00000539176 COPS6Q7L5N1 327 aa31.83■■■□□ 2.69
KLHL42-202ENST00000539176 PTF1AQ7RTS3 328 aa31.83■■■□□ 2.69
KLHL42-202ENST00000539176 MAP3K2Q9Y2U5 619 aa31.83■■■□□ 2.69
KLHL42-202ENST00000539176 PXDNLA1KZ92 1463 aa31.83■■■□□ 2.69
KLHL42-202ENST00000539176 GCC1Q96CN9 775 aa31.82■■■□□ 2.68
KLHL42-202ENST00000539176 KSR2Q6VAB6 950 aa31.81■■■□□ 2.68
KLHL42-202ENST00000539176 VSIG10Q8N0Z9 540 aa31.81■■■□□ 2.68
KLHL42-202ENST00000539176 FBXO41Q8TF61 875 aa31.8■■■□□ 2.68
KLHL42-202ENST00000539176 TJP1Q07157 1748 aa31.8■■■□□ 2.68
KLHL42-202ENST00000539176 ERBB4Q15303 1308 aa31.78■■■□□ 2.68
KLHL42-202ENST00000539176 NUCB1Q02818 461 aa31.78■■■□□ 2.68
KLHL42-202ENST00000539176 BEND3Q5T5X7 828 aa31.78■■■□□ 2.68
KLHL42-202ENST00000539176 BRWD3Q6RI45 1802 aa31.77■■■□□ 2.68
KLHL42-202ENST00000539176 DDX58O95786 925 aaKnown RBP31.76■■■□□ 2.68
KLHL42-202ENST00000539176 SRCIN1Q9C0H9 1055 aa31.76■■■□□ 2.68
KLHL42-202ENST00000539176 TEX13AQ9BXU3 409 aaPredicted RBP31.76■■■□□ 2.67
KLHL42-202ENST00000539176 PALLDQ8WX93 1383 aa31.75■■■□□ 2.67
KLHL42-202ENST00000539176 RIC3Q7Z5B4 369 aa31.75■■■□□ 2.67
KLHL42-202ENST00000539176 CYP19A1P11511 503 aaPredicted RBP31.74■■■□□ 2.67
KLHL42-202ENST00000539176 ZNF772Q68DY9 489 aaPredicted RBP31.74■■■□□ 2.67
KLHL42-202ENST00000539176 NHSQ6T4R5 1651 aa31.73■■■□□ 2.67
KLHL42-202ENST00000539176 BTAF1O14981 1849 aa31.73■■■□□ 2.67
KLHL42-202ENST00000539176 STARD3NLO95772 234 aa31.73■■■□□ 2.67
KLHL42-202ENST00000539176 TTLL7Q6ZT98 887 aa31.73■■■□□ 2.67
KLHL42-202ENST00000539176 SIRT2Q8IXJ6 389 aa31.73■■■□□ 2.67
KLHL42-202ENST00000539176 SBF2Q86WG5 1849 aa31.73■■■□□ 2.67
KLHL42-202ENST00000539176 ATP10DQ9P241 1426 aa31.72■■■□□ 2.67
KLHL42-202ENST00000539176 USP44Q9H0E7 712 aa31.72■■■□□ 2.67
KLHL42-202ENST00000539176 ZNF330Q9Y3S2 320 aaPredicted RBP31.72■■■□□ 2.67
Retrieved 100 of 20,778 RNA–protein pairs in 106 ms