RNA–Protein interactions for RNA: ENST00000539047.1

VAMP1-207, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 4

Gene VAMP1, Length 565 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-207ENST00000539047 DZIP1LQ8IYY4 767 aaKnown RBP19.62■□□□□ 0.73
VAMP1-207ENST00000539047 TEX13AQ9BXU3 409 aaPredicted RBP19.62■□□□□ 0.73
VAMP1-207ENST00000539047 CICQ96RK0 1608 aaPredicted RBP19.62■□□□□ 0.73
VAMP1-207ENST00000539047 PTCD1O75127 700 aaKnown RBP19.61■□□□□ 0.73
VAMP1-207ENST00000539047 KRT27Q7Z3Y8 459 aa19.61■□□□□ 0.73
VAMP1-207ENST00000539047 VSIG10Q8N0Z9 540 aa19.61■□□□□ 0.73
VAMP1-207ENST00000539047 N4BP2Q86UW6 1770 aaPredicted RBP19.61■□□□□ 0.73
VAMP1-207ENST00000539047 ZNF831Q5JPB2 1677 aa19.61■□□□□ 0.73
VAMP1-207ENST00000539047 ERBB4Q15303 1308 aa19.6■□□□□ 0.73
VAMP1-207ENST00000539047 RBM42Q9BTD8 480 aaKnown RBP19.6■□□□□ 0.73
VAMP1-207ENST00000539047 ATG3Q9NT62 314 aa19.6■□□□□ 0.73
VAMP1-207ENST00000539047 ASAP1Q9ULH1 1129 aa19.6■□□□□ 0.73
VAMP1-207ENST00000539047 TJP1Q07157 1748 aa19.59■□□□□ 0.73
VAMP1-207ENST00000539047 TRIM27P14373 513 aa19.59■□□□□ 0.73
VAMP1-207ENST00000539047 CHMP4BQ9H444 224 aaKnown RBP19.59■□□□□ 0.73
VAMP1-207ENST00000539047 HYPKQ9NX55 129 aa19.59■□□□□ 0.73
VAMP1-207ENST00000539047 CHPF2Q9P2E5 772 aa19.59■□□□□ 0.73
VAMP1-207ENST00000539047 FAM196AQ6ZSG2 479 aa19.58■□□□□ 0.72
VAMP1-207ENST00000539047 CLUAP1Q96AJ1 413 aa19.58■□□□□ 0.72
VAMP1-207ENST00000539047 CRBNQ96SW2 442 aa19.58■□□□□ 0.72
VAMP1-207ENST00000539047 PALLDQ8WX93 1383 aa19.57■□□□□ 0.72
VAMP1-207ENST00000539047 FLIIQ13045 1269 aa19.57■□□□□ 0.72
VAMP1-207ENST00000539047 FKBP5Q13451 457 aaPredicted RBP19.57■□□□□ 0.72
VAMP1-207ENST00000539047 DDX21Q9NR30 783 aaKnown RBP eCLIP19.57■□□□□ 0.72
VAMP1-207ENST00000539047 PXDNLA1KZ92 1463 aa19.56■□□□□ 0.72
VAMP1-207ENST00000539047 STARD3NLO95772 234 aa19.56■□□□□ 0.72
VAMP1-207ENST00000539047 DDX58O95786 925 aaKnown RBP19.56■□□□□ 0.72
VAMP1-207ENST00000539047 C20orf194Q5TEA3 1177 aa19.56■□□□□ 0.72
VAMP1-207ENST00000539047 PANK1Q8TE04 598 aa19.56■□□□□ 0.72
VAMP1-207ENST00000539047 AAMPQ13685 434 aa19.55■□□□□ 0.72
VAMP1-207ENST00000539047 ITPRIPQ8IWB1 547 aa19.55■□□□□ 0.72
VAMP1-207ENST00000539047 PPP4R2Q9NY27 417 aa19.55■□□□□ 0.72
VAMP1-207ENST00000539047 ABCC4O15439 1325 aa19.54■□□□□ 0.72
VAMP1-207ENST00000539047 LY75O60449 1722 aa19.54■□□□□ 0.72
VAMP1-207ENST00000539047 PRAMEF22A3QJZ6 481 aa19.54■□□□□ 0.72
VAMP1-207ENST00000539047 MVPQ14764 893 aaKnown RBP19.54■□□□□ 0.72
VAMP1-207ENST00000539047 EXOC6Q8TAG9 804 aa19.54■□□□□ 0.72
VAMP1-207ENST00000539047 DDX19BQ9UMR2 479 aa19.54■□□□□ 0.72
VAMP1-207ENST00000539047 COG6Q9Y2V7 657 aa19.54■□□□□ 0.72
VAMP1-207ENST00000539047 SRCAPQ6ZRS2 3230 aa19.54■□□□□ 0.72
VAMP1-207ENST00000539047 COL5A3P25940 1745 aaPredicted RBP19.54■□□□□ 0.72
VAMP1-207ENST00000539047 KCNQ2O43526 872 aa19.52■□□□□ 0.72
VAMP1-207ENST00000539047 FAM182BQ5T319 152 aa19.52■□□□□ 0.72
VAMP1-207ENST00000539047 NPM2Q86SE8 214 aaKnown RBP19.52■□□□□ 0.72
VAMP1-207ENST00000539047 USP16Q9Y5T5 823 aa19.52■□□□□ 0.72
VAMP1-207ENST00000539047 MYL6BP14649 208 aa19.51■□□□□ 0.71
VAMP1-207ENST00000539047 CCT4P50991 539 aaKnown RBP19.51■□□□□ 0.71
VAMP1-207ENST00000539047 G2E3Q7L622 706 aa19.51■□□□□ 0.71
VAMP1-207ENST00000539047 ARFGEF2Q9Y6D5 1785 aa19.51■□□□□ 0.71
VAMP1-207ENST00000539047 LOC102724428A0A0B4J2F2 783 aa19.5■□□□□ 0.71
VAMP1-207ENST00000539047 RLBP1P12271 317 aa19.5■□□□□ 0.71
VAMP1-207ENST00000539047 ATP6V1AP38606 617 aa19.5■□□□□ 0.71
VAMP1-207ENST00000539047 SIK1P57059 783 aa19.5■□□□□ 0.71
VAMP1-207ENST00000539047 DNAJC10Q8IXB1 793 aa19.5■□□□□ 0.71
VAMP1-207ENST00000539047 TMEM57Q8N5G2 664 aa19.5■□□□□ 0.71
VAMP1-207ENST00000539047 BCL11BQ9C0K0 894 aaPredicted RBP19.5■□□□□ 0.71
VAMP1-207ENST00000539047 RREB1Q92766 1687 aa19.49■□□□□ 0.71
VAMP1-207ENST00000539047 HMGB2P26583 209 aaKnown RBP19.49■□□□□ 0.71
VAMP1-207ENST00000539047 SLC4A10Q6U841 1118 aa19.49■□□□□ 0.71
VAMP1-207ENST00000539047 PHAXQ9H814 394 aaKnown RBP19.49■□□□□ 0.71
VAMP1-207ENST00000539047 TNNQ9UQP3 1299 aa19.49■□□□□ 0.71
VAMP1-207ENST00000539047 ANXA1P04083 346 aa19.48■□□□□ 0.71
VAMP1-207ENST00000539047 CCDC125Q86Z20 511 aa19.48■□□□□ 0.71
VAMP1-207ENST00000539047 CCDC136Q96JN2 1154 aa19.48■□□□□ 0.71
VAMP1-207ENST00000539047 AFDNP55196 1824 aaKnown RBP19.48■□□□□ 0.71
VAMP1-207ENST00000539047 TAF1LQ8IZX4 1826 aa19.47■□□□□ 0.71
VAMP1-207ENST00000539047 PROSER3Q2NL68 480 aa19.47■□□□□ 0.71
VAMP1-207ENST00000539047 INTS3Q68E01 1043 aaKnown RBP19.47■□□□□ 0.71
VAMP1-207ENST00000539047 NUP188Q5SRE5 1749 aa19.47■□□□□ 0.71
VAMP1-207ENST00000539047 AIMP1Q12904 312 aaKnown RBP19.46■□□□□ 0.71
VAMP1-207ENST00000539047 PDIA6Q15084 440 aa19.46■□□□□ 0.71
VAMP1-207ENST00000539047 KSR2Q6VAB6 950 aa19.46■□□□□ 0.71
VAMP1-207ENST00000539047 RIC3Q7Z5B4 369 aa19.46■□□□□ 0.71
VAMP1-207ENST00000539047 XAGE3Q8WTP9 111 aa19.46■□□□□ 0.71
VAMP1-207ENST00000539047 DNAAF4Q8WXU2 420 aa19.46■□□□□ 0.71
VAMP1-207ENST00000539047 CYP19A1P11511 503 aaPredicted RBP19.45■□□□□ 0.7
VAMP1-207ENST00000539047 NEXNQ0ZGT2 675 aa19.45■□□□□ 0.7
VAMP1-207ENST00000539047 KIF6Q6ZMV9 814 aa19.45■□□□□ 0.7
VAMP1-207ENST00000539047 ZNF330Q9Y3S2 320 aaPredicted RBP19.45■□□□□ 0.7
VAMP1-207ENST00000539047 RGPD3A6NKT7 1758 aaPredicted RBP19.44■□□□□ 0.7
VAMP1-207ENST00000539047 RGPD4Q7Z3J3 1758 aa19.44■□□□□ 0.7
VAMP1-207ENST00000539047 ATP10DQ9P241 1426 aa19.44■□□□□ 0.7
VAMP1-207ENST00000539047 PI4KAP2A4QPH2 592 aa19.44■□□□□ 0.7
VAMP1-207ENST00000539047 F6X3S4 739 aa19.44■□□□□ 0.7
VAMP1-207ENST00000539047 A1BGP04217 495 aa19.44■□□□□ 0.7
VAMP1-207ENST00000539047 COPS6Q7L5N1 327 aa19.44■□□□□ 0.7
VAMP1-207ENST00000539047 PI4KAP1Q8N8J0 262 aa19.44■□□□□ 0.7
VAMP1-207ENST00000539047 CCDC87Q9NVE4 849 aa19.44■□□□□ 0.7
VAMP1-207ENST00000539047 TNS1Q9HBL0 1735 aaKnown RBP19.44■□□□□ 0.7
VAMP1-207ENST00000539047 TRIM37O94972 964 aa19.43■□□□□ 0.7
VAMP1-207ENST00000539047 DEFB132Q7Z7B7 95 aa19.43■□□□□ 0.7
VAMP1-207ENST00000539047 SRCIN1Q9C0H9 1055 aa19.43■□□□□ 0.7
VAMP1-207ENST00000539047 CCNL1Q9UK58 526 aaPredicted RBP19.43■□□□□ 0.7
VAMP1-207ENST00000539047 MAP3K2Q9Y2U5 619 aa19.43■□□□□ 0.7
VAMP1-207ENST00000539047 ADCY9O60503 1353 aa19.43■□□□□ 0.7
VAMP1-207ENST00000539047 ANKRD36CQ5JPF3 1778 aa19.42■□□□□ 0.7
VAMP1-207ENST00000539047 PIP4K2AP48426 406 aaPredicted RBP19.42■□□□□ 0.7
VAMP1-207ENST00000539047 ANKRD13DQ6ZTN6 518 aa19.42■□□□□ 0.7
VAMP1-207ENST00000539047 SLC4A9Q96Q91 983 aa19.42■□□□□ 0.7
VAMP1-207ENST00000539047 NBPF26B4DH59 902 aa19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms