RNA–Protein interactions for RNA: ENST00000539029.5

PTPN6-212, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 3

Gene PTPN6, Length 705 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-212ENST00000539029 RFC4P35249 363 aa13.73□□□□□ -0.21
PTPN6-212ENST00000539029 EIF4G2P78344 907 aaKnown RBP eCLIP13.73□□□□□ -0.21
PTPN6-212ENST00000539029 ITPK1Q13572 414 aa13.73□□□□□ -0.21
PTPN6-212ENST00000539029 CIAPIN1Q6FI81 312 aa13.73□□□□□ -0.21
PTPN6-212ENST00000539029 PNMA8AQ86V59 439 aaPredicted RBP13.73□□□□□ -0.21
PTPN6-212ENST00000539029 COLQQ9Y215 455 aaPredicted RBP13.73□□□□□ -0.21
PTPN6-212ENST00000539029 MKI67P46013 3256 aaKnown RBP13.72□□□□□ -0.21
PTPN6-212ENST00000539029 FER1L6Q2WGJ9 1857 aa13.72□□□□□ -0.21
PTPN6-212ENST00000539029 CTU1Q7Z7A3 348 aaKnown RBP13.72□□□□□ -0.21
PTPN6-212ENST00000539029 HACL1Q9UJ83 578 aa13.72□□□□□ -0.21
PTPN6-212ENST00000539029 EPHX2P34913 555 aa13.71□□□□□ -0.21
PTPN6-212ENST00000539029 DDR1Q08345 913 aa13.71□□□□□ -0.21
PTPN6-212ENST00000539029 HSPA5P11021 654 aaKnown RBP13.7□□□□□ -0.22
PTPN6-212ENST00000539029 ATP6V1AP38606 617 aa13.7□□□□□ -0.22
PTPN6-212ENST00000539029 ZNF692Q9BU19 519 aaPredicted RBP13.7□□□□□ -0.22
PTPN6-212ENST00000539029 CST9Q5W186 159 aa13.69□□□□□ -0.22
PTPN6-212ENST00000539029 PIGBQ92521 554 aa13.69□□□□□ -0.22
PTPN6-212ENST00000539029 LTV1Q96GA3 475 aaPredicted RBP13.69□□□□□ -0.22
PTPN6-212ENST00000539029 ZEB1P37275 1124 aaPredicted RBP13.68□□□□□ -0.22
PTPN6-212ENST00000539029 FMR1Q06787 632 aaKnown RBP eCLIP13.68□□□□□ -0.22
PTPN6-212ENST00000539029 CEP290O15078 2479 aa13.68□□□□□ -0.22
PTPN6-212ENST00000539029 CGNL1Q0VF96 1302 aa13.67□□□□□ -0.22
PTPN6-212ENST00000539029 LTBP3Q9NS15 1303 aa13.67□□□□□ -0.22
PTPN6-212ENST00000539029 SMG6Q86US8 1419 aaKnown RBP13.67□□□□□ -0.22
PTPN6-212ENST00000539029 CDCA8Q53HL2 280 aa13.67□□□□□ -0.22
PTPN6-212ENST00000539029 HHIPL1Q96JK4 782 aa13.67□□□□□ -0.22
PTPN6-212ENST00000539029 RGPD2P0DJD1 1756 aa13.67□□□□□ -0.22
PTPN6-212ENST00000539029 SAPCD2Q86UD0 394 aa13.66□□□□□ -0.22
PTPN6-212ENST00000539029 SAGE1Q9NXZ1 904 aa13.66□□□□□ -0.22
PTPN6-212ENST00000539029 PCDH11XQ9BZA7 1347 aa13.65□□□□□ -0.22
PTPN6-212ENST00000539029 PCDH11YQ9BZA8 1340 aa13.65□□□□□ -0.22
PTPN6-212ENST00000539029 POLRMTO00411 1230 aaKnown RBP13.65□□□□□ -0.22
PTPN6-212ENST00000539029 FKBP8Q14318 412 aa13.65□□□□□ -0.22
PTPN6-212ENST00000539029 PKN2Q16513 984 aaKnown RBP13.65□□□□□ -0.22
PTPN6-212ENST00000539029 IP6K1Q92551 441 aa13.65□□□□□ -0.22
PTPN6-212ENST00000539029 TAOK3Q9H2K8 898 aa13.65□□□□□ -0.22
PTPN6-212ENST00000539029 USP31Q70CQ4 1352 aa13.65□□□□□ -0.22
PTPN6-212ENST00000539029 CD163L1Q9NR16 1453 aa13.64□□□□□ -0.23
PTPN6-212ENST00000539029 INSRP06213 1382 aa13.64□□□□□ -0.23
PTPN6-212ENST00000539029 RPS6KA4O75676 772 aa13.64□□□□□ -0.23
PTPN6-212ENST00000539029 NOGQ13253 232 aa13.64□□□□□ -0.23
PTPN6-212ENST00000539029 RC3H1Q5TC82 1133 aaKnown RBP13.64□□□□□ -0.23
PTPN6-212ENST00000539029 COL25A1Q9BXS0 654 aaPredicted RBP13.64□□□□□ -0.23
PTPN6-212ENST00000539029 AKAP4Q5JQC9 854 aa13.63□□□□□ -0.23
PTPN6-212ENST00000539029 AFDNP55196 1824 aaKnown RBP13.62□□□□□ -0.23
PTPN6-212ENST00000539029 C21orf2O43822 256 aa13.62□□□□□ -0.23
PTPN6-212ENST00000539029 RNF123Q5XPI4 1314 aa13.62□□□□□ -0.23
PTPN6-212ENST00000539029 AKAP11Q9UKA4 1901 aa13.61□□□□□ -0.23
PTPN6-212ENST00000539029 TRAF5O00463 557 aa13.61□□□□□ -0.23
PTPN6-212ENST00000539029 TM4SF1P30408 202 aa13.61□□□□□ -0.23
PTPN6-212ENST00000539029 C2CD5Q86YS7 1000 aa13.61□□□□□ -0.23
PTPN6-212ENST00000539029 RAPGEF4Q8WZA2 1011 aa13.61□□□□□ -0.23
PTPN6-212ENST00000539029 ZIC5Q96T25 663 aa13.61□□□□□ -0.23
PTPN6-212ENST00000539029 SLC12A5Q9H2X9 1139 aa13.61□□□□□ -0.23
PTPN6-212ENST00000539029 SRP68Q9UHB9 627 aaKnown RBP13.61□□□□□ -0.23
PTPN6-212ENST00000539029 ASAP1Q9ULH1 1129 aa13.61□□□□□ -0.23
PTPN6-212ENST00000539029 CNTNAP4Q9C0A0 1308 aa13.61□□□□□ -0.23
PTPN6-212ENST00000539029 H0YIN7 160 aa13.6□□□□□ -0.23
PTPN6-212ENST00000539029 TMC1Q8TDI8 760 aa13.6□□□□□ -0.23
PTPN6-212ENST00000539029 MAP3K19Q56UN5 1328 aa13.6□□□□□ -0.23
PTPN6-212ENST00000539029 ZNF541Q9H0D2 1346 aa13.6□□□□□ -0.23
PTPN6-212ENST00000539029 USP42Q9H9J4 1324 aaKnown RBP13.6□□□□□ -0.23
PTPN6-212ENST00000539029 MYH14Q7Z406 1995 aaKnown RBP13.6□□□□□ -0.23
PTPN6-212ENST00000539029 COL5A3P25940 1745 aaPredicted RBP13.59□□□□□ -0.23
PTPN6-212ENST00000539029 MON2Q7Z3U7 1717 aa13.59□□□□□ -0.23
PTPN6-212ENST00000539029 CYP27B1O15528 508 aa13.59□□□□□ -0.23
PTPN6-212ENST00000539029 TERF2IPQ9NYB0 399 aa13.59□□□□□ -0.23
PTPN6-212ENST00000539029 NRXN2Q9P2S2 1712 aa13.59□□□□□ -0.23
PTPN6-212ENST00000539029 TRPA1O75762 1119 aa13.58□□□□□ -0.24
PTPN6-212ENST00000539029 TATP17735 454 aaPredicted RBP13.58□□□□□ -0.24
PTPN6-212ENST00000539029 HDGFL2Q7Z4V5 671 aaPredicted RBP13.58□□□□□ -0.24
PTPN6-212ENST00000539029 OTUD5Q96G74 571 aa13.58□□□□□ -0.24
PTPN6-212ENST00000539029 PRDM6Q9NQX0 595 aa13.58□□□□□ -0.24
PTPN6-212ENST00000539029 ZNF831Q5JPB2 1677 aa13.58□□□□□ -0.24
PTPN6-212ENST00000539029 A0A1W2PP64 1363 aa13.58□□□□□ -0.24
PTPN6-212ENST00000539029 KTN1Q86UP2 1357 aaKnown RBP13.58□□□□□ -0.24
PTPN6-212ENST00000539029 RNF186Q9NXI6 227 aa13.57□□□□□ -0.24
PTPN6-212ENST00000539029 TMOD3Q9NYL9 352 aa13.57□□□□□ -0.24
PTPN6-212ENST00000539029 UNC80Q8N2C7 3258 aa13.57□□□□□ -0.24
PTPN6-212ENST00000539029 KDRP35968 1356 aa13.57□□□□□ -0.24
PTPN6-212ENST00000539029 SCN11AQ9UI33 1791 aa13.56□□□□□ -0.24
PTPN6-212ENST00000539029 CELF2O95319 508 aaKnown RBP13.56□□□□□ -0.24
PTPN6-212ENST00000539029 BICDL1Q6ZP65 573 aa13.56□□□□□ -0.24
PTPN6-212ENST00000539029 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.56□□□□□ -0.24
PTPN6-212ENST00000539029 EDC4Q6P2E9 1401 aaKnown RBP13.56□□□□□ -0.24
PTPN6-212ENST00000539029 KIAA0100Q14667 2235 aaKnown RBP13.55□□□□□ -0.24
PTPN6-212ENST00000539029 NME9Q86XW9 330 aa13.55□□□□□ -0.24
PTPN6-212ENST00000539029 KIF7Q2M1P5 1343 aa13.55□□□□□ -0.24
PTPN6-212ENST00000539029 NBPF6Q5VWK0 638 aa13.54□□□□□ -0.24
PTPN6-212ENST00000539029 ZNF622Q969S3 477 aaKnown RBP eCLIP13.54□□□□□ -0.24
PTPN6-212ENST00000539029 NBPF4Q96M43 638 aa13.54□□□□□ -0.24
PTPN6-212ENST00000539029 SLC4A9Q96Q91 983 aa13.54□□□□□ -0.24
PTPN6-212ENST00000539029 ATG3Q9NT62 314 aa13.54□□□□□ -0.24
PTPN6-212ENST00000539029 NKX1-1Q15270 411 aaPredicted RBP13.53□□□□□ -0.24
PTPN6-212ENST00000539029 FBXO46Q6PJ61 603 aaPredicted RBP13.53□□□□□ -0.24
PTPN6-212ENST00000539029 USHBP1Q8N6Y0 703 aa13.53□□□□□ -0.24
PTPN6-212ENST00000539029 RANBP2P49792 3224 aaKnown RBP13.53□□□□□ -0.24
PTPN6-212ENST00000539029 POTEFA5A3E0 1075 aa13.52□□□□□ -0.25
PTPN6-212ENST00000539029 HOXC9P31274 260 aa13.52□□□□□ -0.25
PTPN6-212ENST00000539029 GPC2Q8N158 579 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms