RNA–Protein interactions for RNA: ENST00000538966.5

PLXNB3-209, Transcript of plexin B3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PLXNB3, Length 6,377 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLXNB3-209ENST00000538966 C8orf76Q96K31 380 aa16.5■□□□□ 0.23
PLXNB3-209ENST00000538966 PTPN23Q9H3S7 1636 aa16.5■□□□□ 0.23
PLXNB3-209ENST00000538966 GLRX3O76003 335 aaKnown RBP16.5■□□□□ 0.23
PLXNB3-209ENST00000538966 RARSP54136 660 aaKnown RBP16.5■□□□□ 0.23
PLXNB3-209ENST00000538966 CAMSAP2Q08AD1 1489 aa16.49■□□□□ 0.23
PLXNB3-209ENST00000538966 SHTN1A0MZ66 631 aa16.49■□□□□ 0.23
PLXNB3-209ENST00000538966 TNNT1P13805 278 aa16.49■□□□□ 0.23
PLXNB3-209ENST00000538966 USP8P40818 1118 aa16.49■□□□□ 0.23
PLXNB3-209ENST00000538966 CACNA2D4Q7Z3S7 1137 aa16.49■□□□□ 0.23
PLXNB3-209ENST00000538966 TBC1D2Q9BYX2 928 aa16.49■□□□□ 0.23
PLXNB3-209ENST00000538966 THEMISQ8N1K5 641 aaPredicted RBP16.49■□□□□ 0.23
PLXNB3-209ENST00000538966 IFIT1P09914 478 aaKnown RBP16.49■□□□□ 0.23
PLXNB3-209ENST00000538966 FKBP15Q5T1M5 1219 aa16.49■□□□□ 0.23
PLXNB3-209ENST00000538966 SEC63Q9UGP8 760 aaKnown RBP16.49■□□□□ 0.23
PLXNB3-209ENST00000538966 GOLGA6L10A0A0M3HER8 536 aa16.49■□□□□ 0.23
PLXNB3-209ENST00000538966 RAB11FIP3O75154 756 aa16.49■□□□□ 0.23
PLXNB3-209ENST00000538966 NUP88Q99567 741 aaPredicted RBP16.49■□□□□ 0.23
PLXNB3-209ENST00000538966 RBM27Q9P2N5 1060 aaKnown RBP16.49■□□□□ 0.23
PLXNB3-209ENST00000538966 BIN1O00499 593 aa16.48■□□□□ 0.23
PLXNB3-209ENST00000538966 PTCD1O75127 700 aaKnown RBP16.48■□□□□ 0.23
PLXNB3-209ENST00000538966 ARHGEF11O15085 1522 aa16.48■□□□□ 0.23
PLXNB3-209ENST00000538966 POGZQ7Z3K3 1410 aa16.48■□□□□ 0.23
PLXNB3-209ENST00000538966 PPFIA3O75145 1194 aa16.48■□□□□ 0.23
PLXNB3-209ENST00000538966 POLR3DP05423 398 aaPredicted RBP16.48■□□□□ 0.23
PLXNB3-209ENST00000538966 PRDM11Q9NQV5 511 aa16.48■□□□□ 0.23
PLXNB3-209ENST00000538966 GBP3Q9H0R5 595 aa16.48■□□□□ 0.23
PLXNB3-209ENST00000538966 ISM2Q6H9L7 571 aa16.47■□□□□ 0.23
PLXNB3-209ENST00000538966 SCAND2PQ9GZW5 306 aaPredicted RBP16.47■□□□□ 0.23
PLXNB3-209ENST00000538966 TFIP11Q9UBB9 837 aaKnown RBP16.47■□□□□ 0.23
PLXNB3-209ENST00000538966 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.47■□□□□ 0.23
PLXNB3-209ENST00000538966 MKNK2Q9HBH9 465 aa16.47■□□□□ 0.23
PLXNB3-209ENST00000538966 LUZP1Q86V48 1076 aa16.47■□□□□ 0.23
PLXNB3-209ENST00000538966 NAPBQ9H115 298 aa16.47■□□□□ 0.23
PLXNB3-209ENST00000538966 GRIN2AQ12879 1464 aa16.47■□□□□ 0.23
PLXNB3-209ENST00000538966 CCDC144CPQ8IYA2 1237 aa16.46■□□□□ 0.23
PLXNB3-209ENST00000538966 TSG101Q99816 390 aa16.46■□□□□ 0.23
PLXNB3-209ENST00000538966 RANBP6O60518 1105 aaKnown RBP16.46■□□□□ 0.23
PLXNB3-209ENST00000538966 CHMP4BP1P59074 171 aa16.46■□□□□ 0.23
PLXNB3-209ENST00000538966 IFFO1Q0D2I5 559 aa16.46■□□□□ 0.23
PLXNB3-209ENST00000538966 TAF7Q15545 349 aaPredicted RBP16.46■□□□□ 0.23
PLXNB3-209ENST00000538966 TMC6Q7Z403 805 aa16.46■□□□□ 0.23
PLXNB3-209ENST00000538966 FSIP1Q8NA03 581 aa16.46■□□□□ 0.23
PLXNB3-209ENST00000538966 INCENPQ9NQS7 918 aa16.46■□□□□ 0.23
PLXNB3-209ENST00000538966 KIF2AO00139 706 aaPredicted RBP16.46■□□□□ 0.22
PLXNB3-209ENST00000538966 CNNM3Q8NE01 707 aa16.46■□□□□ 0.22
PLXNB3-209ENST00000538966 NUDT16Q96DE0 195 aaKnown RBP16.46■□□□□ 0.22
PLXNB3-209ENST00000538966 PPP1R12BO60237 982 aaPredicted RBP16.45■□□□□ 0.22
PLXNB3-209ENST00000538966 RNF187Q5TA31 235 aaPredicted RBP16.45■□□□□ 0.22
PLXNB3-209ENST00000538966 CTNNBL1Q8WYA6 563 aaPredicted RBP16.45■□□□□ 0.22
PLXNB3-209ENST00000538966 DESP17661 470 aa16.45■□□□□ 0.22
PLXNB3-209ENST00000538966 GJB2P29033 226 aa16.45■□□□□ 0.22
PLXNB3-209ENST00000538966 AKAP2Q9Y2D5 859 aa16.45■□□□□ 0.22
PLXNB3-209ENST00000538966 GIMAP7Q8NHV1 300 aa16.45■□□□□ 0.22
PLXNB3-209ENST00000538966 SLC12A7Q9Y666 1083 aa16.45■□□□□ 0.22
PLXNB3-209ENST00000538966 SPDYE4A6NLX3 237 aa16.45■□□□□ 0.22
PLXNB3-209ENST00000538966 RAB11FIP4Q86YS3 637 aa16.45■□□□□ 0.22
PLXNB3-209ENST00000538966 SH2B1Q9NRF2 756 aaPredicted RBP16.45■□□□□ 0.22
PLXNB3-209ENST00000538966 ATAD2Q6PL18 1390 aa16.44■□□□□ 0.22
PLXNB3-209ENST00000538966 ADCY5O95622 1261 aa16.44■□□□□ 0.22
PLXNB3-209ENST00000538966 SSRP1Q08945 709 aaKnown RBP16.44■□□□□ 0.22
PLXNB3-209ENST00000538966 TSHZ3Q63HK5 1081 aa16.44■□□□□ 0.22
PLXNB3-209ENST00000538966 CGNQ9P2M7 1197 aaKnown RBP16.44■□□□□ 0.22
PLXNB3-209ENST00000538966 GOLGA8BA8MQT2 603 aa16.44■□□□□ 0.22
PLXNB3-209ENST00000538966 MAP9Q49MG5 647 aa16.44■□□□□ 0.22
PLXNB3-209ENST00000538966 TDRD12Q587J7 1177 aaKnown RBP16.44■□□□□ 0.22
PLXNB3-209ENST00000538966 WAPLQ7Z5K2 1190 aa16.44■□□□□ 0.22
PLXNB3-209ENST00000538966 ZNF526Q8TF50 670 aaPredicted RBP16.44■□□□□ 0.22
PLXNB3-209ENST00000538966 PANK2Q9BZ23 570 aa16.44■□□□□ 0.22
PLXNB3-209ENST00000538966 LIMCH1Q9UPQ0 1083 aa16.44■□□□□ 0.22
PLXNB3-209ENST00000538966 POTEJP0CG39 1038 aa16.44■□□□□ 0.22
PLXNB3-209ENST00000538966 TICAM2Q86XR7 235 aa16.44■□□□□ 0.22
PLXNB3-209ENST00000538966 BIVM-ERCC5R4GMW8 1640 aa16.43■□□□□ 0.22
PLXNB3-209ENST00000538966 CCDC91Q7Z6B0 441 aa16.43■□□□□ 0.22
PLXNB3-209ENST00000538966 NKTRP30414 1462 aaKnown RBP16.43■□□□□ 0.22
PLXNB3-209ENST00000538966 ZNF213O14771 459 aa16.43■□□□□ 0.22
PLXNB3-209ENST00000538966 RAPGEF3O95398 923 aa16.43■□□□□ 0.22
PLXNB3-209ENST00000538966 PDIA4P13667 645 aaKnown RBP16.43■□□□□ 0.22
PLXNB3-209ENST00000538966 PEG3Q9GZU2 1588 aa16.43■□□□□ 0.22
PLXNB3-209ENST00000538966 MACROD2A1Z1Q3 448 aa16.43■□□□□ 0.22
PLXNB3-209ENST00000538966 ZFP91Q96JP5 570 aaPredicted RBP16.43■□□□□ 0.22
PLXNB3-209ENST00000538966 GSTTP1A0A1W2PQM5 241 aa16.43■□□□□ 0.22
PLXNB3-209ENST00000538966 GOLGA8AA7E2F4 631 aa16.43■□□□□ 0.22
PLXNB3-209ENST00000538966 STARD3NLO95772 234 aa16.43■□□□□ 0.22
PLXNB3-209ENST00000538966 UBE4AQ14139 1066 aa16.43■□□□□ 0.22
PLXNB3-209ENST00000538966 PPP4R3BQ5MIZ7 849 aa16.43■□□□□ 0.22
PLXNB3-209ENST00000538966 GTF2F1P35269 517 aaKnown RBP eCLIP16.42■□□□□ 0.22
PLXNB3-209ENST00000538966 CRACR2BQ8N4Y2 399 aaPredicted RBP16.42■□□□□ 0.22
PLXNB3-209ENST00000538966 CAVIN4Q5BKX8 364 aa16.42■□□□□ 0.22
PLXNB3-209ENST00000538966 LARP1Q6PKG0 1096 aaKnown RBP16.42■□□□□ 0.22
PLXNB3-209ENST00000538966 NLRP5P59047 1200 aa16.42■□□□□ 0.22
PLXNB3-209ENST00000538966 CCDC96Q2M329 555 aa16.42■□□□□ 0.22
PLXNB3-209ENST00000538966 ALDH1L2Q3SY69 923 aa16.42■□□□□ 0.22
PLXNB3-209ENST00000538966 MAP3K1Q13233 1512 aa16.42■□□□□ 0.22
PLXNB3-209ENST00000538966 NAIPQ13075 1403 aa16.41■□□□□ 0.22
PLXNB3-209ENST00000538966 ANAPC15P60006 121 aa16.41■□□□□ 0.22
PLXNB3-209ENST00000538966 SLC4A8Q2Y0W8 1093 aa16.41■□□□□ 0.22
PLXNB3-209ENST00000538966 CTCFLQ8NI51 663 aaPredicted RBP16.41■□□□□ 0.22
PLXNB3-209ENST00000538966 IFIT3O14879 490 aaKnown RBP16.41■□□□□ 0.22
PLXNB3-209ENST00000538966 LIG1P18858 919 aa16.41■□□□□ 0.22
PLXNB3-209ENST00000538966 TBC1D9Q6ZT07 1266 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms