RNA–Protein interactions for RNA: ENST00000538621.2

PACSIN1-206, Transcript of protein kinase C and casein kinase substrate in neurons 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PACSIN1, Length 4,286 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN1-206ENST00000538621 KCNH5Q8NCM2 988 aa13.03□□□□□ -0.32
PACSIN1-206ENST00000538621 DCTPP1Q9H773 170 aa13.03□□□□□ -0.32
PACSIN1-206ENST00000538621 EFCAB6Q5THR3 1501 aa13.03□□□□□ -0.32
PACSIN1-206ENST00000538621 CCDC192P0DO97 292 aa13.02□□□□□ -0.32
PACSIN1-206ENST00000538621 LRRC59Q96AG4 307 aaKnown RBP13.02□□□□□ -0.32
PACSIN1-206ENST00000538621 TET3O43151 1660 aa13.02□□□□□ -0.32
PACSIN1-206ENST00000538621 ABCC3O15438 1527 aa13.02□□□□□ -0.32
PACSIN1-206ENST00000538621 GUCY1B3Q02153 619 aa13.02□□□□□ -0.32
PACSIN1-206ENST00000538621 KRT28Q7Z3Y7 464 aa13.02□□□□□ -0.32
PACSIN1-206ENST00000538621 CHMP4CQ96CF2 233 aa13.02□□□□□ -0.33
PACSIN1-206ENST00000538621 KDM5AP29375 1690 aaKnown RBP13.02□□□□□ -0.33
PACSIN1-206ENST00000538621 RHPN1Q8TCX5 695 aa13.02□□□□□ -0.33
PACSIN1-206ENST00000538621 PA2G4Q9UQ80 394 aaKnown RBP13.02□□□□□ -0.33
PACSIN1-206ENST00000538621 TRPM1Q7Z4N2 1603 aa13.01□□□□□ -0.33
PACSIN1-206ENST00000538621 CKAP2LQ8IYA6 745 aa13.01□□□□□ -0.33
PACSIN1-206ENST00000538621 CABLES1Q8TDN4 633 aa13.01□□□□□ -0.33
PACSIN1-206ENST00000538621 EYA1Q99502 592 aa13.01□□□□□ -0.33
PACSIN1-206ENST00000538621 KIF1BO60333 1816 aa13.01□□□□□ -0.33
PACSIN1-206ENST00000538621 TMEM2Q9UHN6 1383 aa13.01□□□□□ -0.33
PACSIN1-206ENST00000538621 SLC39A6Q13433 755 aa13.01□□□□□ -0.33
PACSIN1-206ENST00000538621 STK38Q15208 465 aa13.01□□□□□ -0.33
PACSIN1-206ENST00000538621 KLHL40Q2TBA0 621 aa13.01□□□□□ -0.33
PACSIN1-206ENST00000538621 NECAB1Q8N987 351 aa13.01□□□□□ -0.33
PACSIN1-206ENST00000538621 PHAXQ9H814 394 aaKnown RBP13.01□□□□□ -0.33
PACSIN1-206ENST00000538621 DBF4Q9UBU7 674 aaPredicted RBP13.01□□□□□ -0.33
PACSIN1-206ENST00000538621 SBNO2Q9Y2G9 1366 aa13.01□□□□□ -0.33
PACSIN1-206ENST00000538621 UQCRHLA0A096LP55 91 aa13.01□□□□□ -0.33
PACSIN1-206ENST00000538621 UQCRHP07919 91 aa13.01□□□□□ -0.33
PACSIN1-206ENST00000538621 CNNM1Q9NRU3 951 aa13.01□□□□□ -0.33
PACSIN1-206ENST00000538621 MYOM2P54296 1465 aa13.01□□□□□ -0.33
PACSIN1-206ENST00000538621 CFAP74Q9C0B2 1584 aa13□□□□□ -0.33
PACSIN1-206ENST00000538621 IL13P35225 146 aa13□□□□□ -0.33
PACSIN1-206ENST00000538621 ZSCAN23Q3MJ62 389 aa13□□□□□ -0.33
PACSIN1-206ENST00000538621 PAXIP1Q6ZW49 1069 aaPredicted RBP13□□□□□ -0.33
PACSIN1-206ENST00000538621 SMC2O95347 1197 aa13□□□□□ -0.33
PACSIN1-206ENST00000538621 FILIP1Q7Z7B0 1213 aa13□□□□□ -0.33
PACSIN1-206ENST00000538621 LIMCH1Q9UPQ0 1083 aa13□□□□□ -0.33
PACSIN1-206ENST00000538621 TTC39AQ5SRH9 613 aa13□□□□□ -0.33
PACSIN1-206ENST00000538621 ESYT1Q9BSJ8 1104 aa13□□□□□ -0.33
PACSIN1-206ENST00000538621 TMX4Q9H1E5 349 aaPredicted RBP13□□□□□ -0.33
PACSIN1-206ENST00000538621 NUP62CLQ9H1M0 184 aa13□□□□□ -0.33
PACSIN1-206ENST00000538621 TBX22Q9Y458 520 aa13□□□□□ -0.33
PACSIN1-206ENST00000538621 E9PCH4 1651 aa13□□□□□ -0.33
PACSIN1-206ENST00000538621 SHROOM2Q13796 1616 aa13□□□□□ -0.33
PACSIN1-206ENST00000538621 RAD21O60216 631 aa12.99□□□□□ -0.33
PACSIN1-206ENST00000538621 TRMT2AQ8IZ69 625 aaKnown RBP12.99□□□□□ -0.33
PACSIN1-206ENST00000538621 MSH6P52701 1360 aa12.99□□□□□ -0.33
PACSIN1-206ENST00000538621 ECHDC1Q9NTX5 307 aa12.99□□□□□ -0.33
PACSIN1-206ENST00000538621 ARAP3Q8WWN8 1544 aa12.99□□□□□ -0.33
PACSIN1-206ENST00000538621 CPA1P15085 419 aa12.99□□□□□ -0.33
PACSIN1-206ENST00000538621 UBE3BQ7Z3V4 1068 aa12.99□□□□□ -0.33
PACSIN1-206ENST00000538621 SNX21Q969T3 373 aa12.99□□□□□ -0.33
PACSIN1-206ENST00000538621 ORAI2Q96SN7 254 aa12.99□□□□□ -0.33
PACSIN1-206ENST00000538621 CLSTN1O94985 981 aa12.98□□□□□ -0.33
PACSIN1-206ENST00000538621 LETM1O95202 739 aaPredicted RBP12.98□□□□□ -0.33
PACSIN1-206ENST00000538621 HCLS1P14317 486 aaPredicted RBP12.98□□□□□ -0.33
PACSIN1-206ENST00000538621 CCDC57Q2TAC2 916 aa12.98□□□□□ -0.33
PACSIN1-206ENST00000538621 CCDC158Q5M9N0 1113 aa12.98□□□□□ -0.33
PACSIN1-206ENST00000538621 CEP126Q9P2H0 1117 aa12.98□□□□□ -0.33
PACSIN1-206ENST00000538621 RAB3GAP1Q15042 981 aa12.98□□□□□ -0.33
PACSIN1-206ENST00000538621 ANKRD1Q15327 319 aa12.98□□□□□ -0.33
PACSIN1-206ENST00000538621 PDILTQ8N807 584 aa12.98□□□□□ -0.33
PACSIN1-206ENST00000538621 KAT6BQ8WYB5 2073 aa12.98□□□□□ -0.33
PACSIN1-206ENST00000538621 ABCA9Q8IUA7 1624 aa12.98□□□□□ -0.33
PACSIN1-206ENST00000538621 A0A087WZG4 1122 aa12.98□□□□□ -0.33
PACSIN1-206ENST00000538621 ERICH2A1L162 156 aa12.98□□□□□ -0.33
PACSIN1-206ENST00000538621 LRRC2Q9BYS8 371 aa12.98□□□□□ -0.33
PACSIN1-206ENST00000538621 ZBTB3Q9H5J0 574 aa12.98□□□□□ -0.33
PACSIN1-206ENST00000538621 SNRKQ9NRH2 765 aa12.98□□□□□ -0.33
PACSIN1-206ENST00000538621 GJB2P29033 226 aa12.97□□□□□ -0.33
PACSIN1-206ENST00000538621 CWF19L2Q2TBE0 894 aaKnown RBP12.97□□□□□ -0.33
PACSIN1-206ENST00000538621 LARP1Q6PKG0 1096 aaKnown RBP12.97□□□□□ -0.33
PACSIN1-206ENST00000538621 STX6O43752 255 aa12.97□□□□□ -0.33
PACSIN1-206ENST00000538621 PRIM1P49642 420 aaKnown RBP12.97□□□□□ -0.33
PACSIN1-206ENST00000538621 CCT2P78371 535 aaKnown RBP12.97□□□□□ -0.33
PACSIN1-206ENST00000538621 SAFBQ15424 915 aaKnown RBP eCLIP12.97□□□□□ -0.33
PACSIN1-206ENST00000538621 RAB11FIP4Q86YS3 637 aa12.97□□□□□ -0.33
PACSIN1-206ENST00000538621 ANKRD24Q8TF21 1146 aa12.97□□□□□ -0.33
PACSIN1-206ENST00000538621 ZSCAN31Q96LW9 406 aaPredicted RBP12.97□□□□□ -0.33
PACSIN1-206ENST00000538621 ZNF830Q96NB3 372 aaPredicted RBP12.97□□□□□ -0.33
PACSIN1-206ENST00000538621 TTC21AQ8NDW8 1320 aa12.97□□□□□ -0.33
PACSIN1-206ENST00000538621 RNF17Q9BXT8 1623 aaKnown RBP12.97□□□□□ -0.33
PACSIN1-206ENST00000538621 SPHKAPQ2M3C7 1700 aa12.97□□□□□ -0.33
PACSIN1-206ENST00000538621 NUTM2BA6NNL0 878 aaPredicted RBP12.97□□□□□ -0.33
PACSIN1-206ENST00000538621 NUTM2EB1AL46 878 aaPredicted RBP12.97□□□□□ -0.33
PACSIN1-206ENST00000538621 TAF3Q5VWG9 929 aa12.97□□□□□ -0.33
PACSIN1-206ENST00000538621 NUTM2AQ8IVF1 878 aaPredicted RBP12.97□□□□□ -0.33
PACSIN1-206ENST00000538621 PIK3R4Q99570 1358 aa12.96□□□□□ -0.33
PACSIN1-206ENST00000538621 IDH1O75874 414 aaKnown RBP12.96□□□□□ -0.33
PACSIN1-206ENST00000538621 USP26Q9BXU7 913 aa12.96□□□□□ -0.33
PACSIN1-206ENST00000538621 MARCH6O60337 910 aa12.96□□□□□ -0.33
PACSIN1-206ENST00000538621 CLCN1P35523 988 aa12.96□□□□□ -0.33
PACSIN1-206ENST00000538621 GIMAP6Q6P9H5 292 aa12.96□□□□□ -0.33
PACSIN1-206ENST00000538621 CHAMP1Q96JM3 812 aa12.96□□□□□ -0.33
PACSIN1-206ENST00000538621 TPM3P06753 285 aa12.96□□□□□ -0.33
PACSIN1-206ENST00000538621 CNPY2Q9Y2B0 182 aa12.96□□□□□ -0.33
PACSIN1-206ENST00000538621 DHX16O60231 1041 aaKnown RBP12.96□□□□□ -0.34
PACSIN1-206ENST00000538621 ATP8B2P98198 1209 aa12.96□□□□□ -0.34
PACSIN1-206ENST00000538621 RRAGDQ9NQL2 400 aaPredicted RBP12.96□□□□□ -0.34
PACSIN1-206ENST00000538621 TBC1D2BQ9UPU7 963 aa12.96□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms