RNA–Protein interactions for RNA: ENST00000538253.5

PTPN22-211, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

TSL 1 (best) BASIC

Gene PTPN22, Length 3,575 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-211ENST00000538253 USHBP1Q8N6Y0 703 aa4.55□□□□□ -1.68
PTPN22-211ENST00000538253 IL27Q8NEV9 243 aa4.55□□□□□ -1.68
PTPN22-211ENST00000538253 CCDC87Q9NVE4 849 aa4.55□□□□□ -1.68
PTPN22-211ENST00000538253 MEGF6O75095 1541 aa4.55□□□□□ -1.68
PTPN22-211ENST00000538253 NPHP1O15259 732 aa4.55□□□□□ -1.68
PTPN22-211ENST00000538253 CYP27B1O15528 508 aa4.55□□□□□ -1.68
PTPN22-211ENST00000538253 RPS6KA4O75676 772 aa4.55□□□□□ -1.68
PTPN22-211ENST00000538253 RFC4P35249 363 aa4.55□□□□□ -1.68
PTPN22-211ENST00000538253 IL6STP40189 918 aaPredicted RBP4.55□□□□□ -1.68
PTPN22-211ENST00000538253 PARP10Q53GL7 1025 aa4.55□□□□□ -1.68
PTPN22-211ENST00000538253 ZNF790Q6PG37 636 aa4.55□□□□□ -1.68
PTPN22-211ENST00000538253 SPON1Q9HCB6 807 aa4.55□□□□□ -1.68
PTPN22-211ENST00000538253 TFCP2L1Q9NZI6 479 aa4.55□□□□□ -1.68
PTPN22-211ENST00000538253 SOGA3Q5TF21 947 aa4.55□□□□□ -1.68
PTPN22-211ENST00000538253 CLEC4GQ6UXB4 293 aa4.55□□□□□ -1.68
PTPN22-211ENST00000538253 FAM9BQ8IZU0 186 aa4.55□□□□□ -1.68
PTPN22-211ENST00000538253 CEMIPQ8WUJ3 1361 aa4.55□□□□□ -1.68
PTPN22-211ENST00000538253 DBF4Q9UBU7 674 aaPredicted RBP4.55□□□□□ -1.68
PTPN22-211ENST00000538253 PPP1R1BQ9UD71 204 aaPredicted RBP4.55□□□□□ -1.68
PTPN22-211ENST00000538253 BRPF3Q9ULD4 1205 aa4.55□□□□□ -1.68
PTPN22-211ENST00000538253 ADAMTS8Q9UP79 889 aa4.55□□□□□ -1.68
PTPN22-211ENST00000538253 RGPD3A6NKT7 1758 aaPredicted RBP4.54□□□□□ -1.68
PTPN22-211ENST00000538253 RGPD4Q7Z3J3 1758 aa4.54□□□□□ -1.68
PTPN22-211ENST00000538253 LRRC37A3O60309 1634 aa4.54□□□□□ -1.68
PTPN22-211ENST00000538253 HEG1Q9ULI3 1381 aa4.54□□□□□ -1.68
PTPN22-211ENST00000538253 MRC1P22897 1456 aa4.54□□□□□ -1.68
PTPN22-211ENST00000538253 KIF16BQ96L93 1317 aa4.54□□□□□ -1.68
PTPN22-211ENST00000538253 ERVV-1B6SEH8 477 aa4.54□□□□□ -1.68
PTPN22-211ENST00000538253 TMC4Q7Z404 712 aa4.54□□□□□ -1.68
PTPN22-211ENST00000538253 API5Q9BZZ5 524 aaKnown RBP4.54□□□□□ -1.68
PTPN22-211ENST00000538253 MTFR1LQ9H019 292 aa4.54□□□□□ -1.68
PTPN22-211ENST00000538253 MAP2P11137 1827 aaKnown RBP4.54□□□□□ -1.68
PTPN22-211ENST00000538253 PKD1L3Q7Z443 1732 aa4.54□□□□□ -1.68
PTPN22-211ENST00000538253 APAF1O14727 1248 aa4.54□□□□□ -1.68
PTPN22-211ENST00000538253 SLC15A2Q16348 729 aa4.54□□□□□ -1.68
PTPN22-211ENST00000538253 ALDH1L2Q3SY69 923 aa4.54□□□□□ -1.68
PTPN22-211ENST00000538253 AEBP1Q8IUX7 1158 aa4.54□□□□□ -1.68
PTPN22-211ENST00000538253 ACSBG1Q96GR2 724 aa4.54□□□□□ -1.68
PTPN22-211ENST00000538253 CAMKK2Q96RR4 588 aa4.54□□□□□ -1.68
PTPN22-211ENST00000538253 PARP3Q9Y6F1 533 aa4.54□□□□□ -1.68
PTPN22-211ENST00000538253 CHL1O00533 1208 aa4.53□□□□□ -1.68
PTPN22-211ENST00000538253 ST5P78524 1137 aa4.53□□□□□ -1.68
PTPN22-211ENST00000538253 PPP1R42Q7Z4L9 355 aa4.53□□□□□ -1.68
PTPN22-211ENST00000538253 PLEKHF1Q96S99 279 aa4.53□□□□□ -1.68
PTPN22-211ENST00000538253 NHSQ6T4R5 1651 aa4.53□□□□□ -1.68
PTPN22-211ENST00000538253 GTF2E1P29083 439 aaPredicted RBP4.53□□□□□ -1.68
PTPN22-211ENST00000538253 CC2D2BQ6DHV5 1058 aa4.53□□□□□ -1.68
PTPN22-211ENST00000538253 NFATC2IPQ8NCF5 419 aa4.53□□□□□ -1.68
PTPN22-211ENST00000538253 PIGBQ92521 554 aa4.53□□□□□ -1.68
PTPN22-211ENST00000538253 IBTKQ9P2D0 1353 aaPredicted RBP4.53□□□□□ -1.68
PTPN22-211ENST00000538253 ZBED9Q6R2W3 1325 aa4.53□□□□□ -1.68
PTPN22-211ENST00000538253 CANXP27824 592 aaKnown RBP4.53□□□□□ -1.68
PTPN22-211ENST00000538253 HDGFL1Q5TGJ6 251 aa4.53□□□□□ -1.68
PTPN22-211ENST00000538253 SECISBP2LQ93073 1101 aaKnown RBP4.52□□□□□ -1.69
PTPN22-211ENST00000538253 PRDM10Q9NQV6 1147 aa4.52□□□□□ -1.69
PTPN22-211ENST00000538253 DDX21Q9NR30 783 aaKnown RBP eCLIP4.52□□□□□ -1.69
PTPN22-211ENST00000538253 ATG3Q9NT62 314 aa4.52□□□□□ -1.69
PTPN22-211ENST00000538253 LAS1LQ9Y4W2 734 aaKnown RBP4.52□□□□□ -1.69
PTPN22-211ENST00000538253 WNK3Q9BYP7 1800 aa4.52□□□□□ -1.69
PTPN22-211ENST00000538253 PTPRCP08575 1304 aa4.52□□□□□ -1.69
PTPN22-211ENST00000538253 GNPATO15228 680 aa4.52□□□□□ -1.69
PTPN22-211ENST00000538253 PEAK1Q9H792 1746 aa4.52□□□□□ -1.69
PTPN22-211ENST00000538253 KCNQ2O43526 872 aa4.52□□□□□ -1.69
PTPN22-211ENST00000538253 PDE6BP35913 854 aa4.52□□□□□ -1.69
PTPN22-211ENST00000538253 CLCN6P51797 869 aa4.52□□□□□ -1.69
PTPN22-211ENST00000538253 HNRNPUQ00839 825 aaKnown RBP eCLIP4.52□□□□□ -1.69
PTPN22-211ENST00000538253 NEUROD2Q15784 382 aa4.52□□□□□ -1.69
PTPN22-211ENST00000538253 CNPY4Q8N129 248 aa4.52□□□□□ -1.69
PTPN22-211ENST00000538253 NARFQ9UHQ1 456 aa4.52□□□□□ -1.69
PTPN22-211ENST00000538253 GRIN3BO60391 1043 aa4.51□□□□□ -1.69
PTPN22-211ENST00000538253 EIF4A1P60842 406 aaKnown RBP4.51□□□□□ -1.69
PTPN22-211ENST00000538253 EN1Q05925 392 aaPredicted RBP4.51□□□□□ -1.69
PTPN22-211ENST00000538253 TPTE2Q6XPS3 522 aa4.51□□□□□ -1.69
PTPN22-211ENST00000538253 IL17REQ8NFR9 667 aa4.51□□□□□ -1.69
PTPN22-211ENST00000538253 IPO4Q8TEX9 1081 aaKnown RBP4.51□□□□□ -1.69
PTPN22-211ENST00000538253 CD2APQ9Y5K6 639 aa4.51□□□□□ -1.69
PTPN22-211ENST00000538253 PTCD1O75127 700 aaKnown RBP4.51□□□□□ -1.69
PTPN22-211ENST00000538253 BBXQ8WY36 941 aaPredicted RBP4.51□□□□□ -1.69
PTPN22-211ENST00000538253 ARHGAP45Q92619 1136 aa4.51□□□□□ -1.69
PTPN22-211ENST00000538253 SETDB2Q96T68 719 aa4.51□□□□□ -1.69
PTPN22-211ENST00000538253 ZBTB47Q9UFB7 747 aaPredicted RBP4.51□□□□□ -1.69
PTPN22-211ENST00000538253 ZNF831Q5JPB2 1677 aa4.51□□□□□ -1.69
PTPN22-211ENST00000538253 ALDH1L1O75891 902 aa4.5□□□□□ -1.69
PTPN22-211ENST00000538253 FBLN1P23142 703 aa4.5□□□□□ -1.69
PTPN22-211ENST00000538253 CCT4P50991 539 aaKnown RBP4.5□□□□□ -1.69
PTPN22-211ENST00000538253 TWISTNBQ3B726 338 aaPredicted RBP4.5□□□□□ -1.69
PTPN22-211ENST00000538253 DUSP27Q5VZP5 1158 aa4.5□□□□□ -1.69
PTPN22-211ENST00000538253 CCDC146Q8IYE0 955 aa4.5□□□□□ -1.69
PTPN22-211ENST00000538253 KDM6AO15550 1401 aaPredicted RBP4.5□□□□□ -1.69
PTPN22-211ENST00000538253 CRKLP46109 303 aaKnown RBP4.5□□□□□ -1.69
PTPN22-211ENST00000538253 TGFB2P61812 414 aa4.5□□□□□ -1.69
PTPN22-211ENST00000538253 EZH2Q15910 746 aaKnown RBP4.5□□□□□ -1.69
PTPN22-211ENST00000538253 RIC3Q7Z5B4 369 aa4.5□□□□□ -1.69
PTPN22-211ENST00000538253 DZIP3Q86Y13 1208 aaKnown RBP4.5□□□□□ -1.69
PTPN22-211ENST00000538253 SUPT20HQ8NEM7 779 aa4.5□□□□□ -1.69
PTPN22-211ENST00000538253 CNKSR1Q969H4 720 aa4.5□□□□□ -1.69
PTPN22-211ENST00000538253 GIGYF1O75420 1035 aaPredicted RBP4.5□□□□□ -1.69
PTPN22-211ENST00000538253 ZNF853P0CG23 659 aa4.5□□□□□ -1.69
PTPN22-211ENST00000538253 MCM10Q7L590 875 aa4.5□□□□□ -1.69
PTPN22-211ENST00000538253 PLBD2Q8NHP8 589 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms