RNA–Protein interactions for RNA: ENST00000538039.5

CLPB-209, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene CLPB, Length 3,078 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-209ENST00000538039 RUFY3Q7L099 469 aa17.09■□□□□ 0.33
CLPB-209ENST00000538039 FAM13BQ9NYF5 915 aa17.09■□□□□ 0.33
CLPB-209ENST00000538039 SNX14Q9Y5W7 946 aa17.09■□□□□ 0.33
CLPB-209ENST00000538039 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.09■□□□□ 0.33
CLPB-209ENST00000538039 NWD1Q149M9 1564 aa17.08■□□□□ 0.33
CLPB-209ENST00000538039 GNAI3P08754 354 aa17.08■□□□□ 0.33
CLPB-209ENST00000538039 CCDC30Q5VVM6 783 aa17.08■□□□□ 0.33
CLPB-209ENST00000538039 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.08■□□□□ 0.33
CLPB-209ENST00000538039 SSH3Q8TE77 659 aa17.08■□□□□ 0.33
CLPB-209ENST00000538039 TSC1Q92574 1164 aa17.08■□□□□ 0.33
CLPB-209ENST00000538039 INTS4Q96HW7 963 aaKnown RBP17.08■□□□□ 0.33
CLPB-209ENST00000538039 ARID3AQ99856 593 aa17.08■□□□□ 0.33
CLPB-209ENST00000538039 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.08■□□□□ 0.33
CLPB-209ENST00000538039 SBNO1A3KN83 1393 aa17.08■□□□□ 0.33
CLPB-209ENST00000538039 FLT4P35916 1363 aa17.08■□□□□ 0.33
CLPB-209ENST00000538039 SURF6O75683 361 aaKnown RBP17.08■□□□□ 0.32
CLPB-209ENST00000538039 IL17RAQ96F46 866 aa17.08■□□□□ 0.32
CLPB-209ENST00000538039 GNAT3A8MTJ3 354 aa17.07■□□□□ 0.32
CLPB-209ENST00000538039 TTC14Q96N46 770 aa17.07■□□□□ 0.32
CLPB-209ENST00000538039 UBR1Q8IWV7 1749 aa17.07■□□□□ 0.32
CLPB-209ENST00000538039 AK2P54819 239 aa17.07■□□□□ 0.32
CLPB-209ENST00000538039 ANAPC15P60006 121 aa17.07■□□□□ 0.32
CLPB-209ENST00000538039 LSG1Q9H089 658 aaKnown RBP17.07■□□□□ 0.32
CLPB-209ENST00000538039 TSPY26PQ9H489 355 aa17.07■□□□□ 0.32
CLPB-209ENST00000538039 UQCRHLA0A096LP55 91 aa17.07■□□□□ 0.32
CLPB-209ENST00000538039 UQCRHP07919 91 aa17.07■□□□□ 0.32
CLPB-209ENST00000538039 EIF2S2P20042 333 aaKnown RBP17.07■□□□□ 0.32
CLPB-209ENST00000538039 LGR6Q9HBX8 967 aa17.07■□□□□ 0.32
CLPB-209ENST00000538039 PIK3C2AO00443 1686 aa17.07■□□□□ 0.32
CLPB-209ENST00000538039 LRRC37A3O60309 1634 aa17.06■□□□□ 0.32
CLPB-209ENST00000538039 AP5Z1O43299 807 aa17.06■□□□□ 0.32
CLPB-209ENST00000538039 UBTFL1P0CB47 393 aaPredicted RBP17.06■□□□□ 0.32
CLPB-209ENST00000538039 PLPPR3Q6T4P5 718 aa17.06■□□□□ 0.32
CLPB-209ENST00000538039 TNRQ92752 1358 aa17.06■□□□□ 0.32
CLPB-209ENST00000538039 MBD3O95983 291 aa17.06■□□□□ 0.32
CLPB-209ENST00000538039 ADCK5Q3MIX3 580 aa17.06■□□□□ 0.32
CLPB-209ENST00000538039 CWC27Q6UX04 472 aaKnown RBP17.06■□□□□ 0.32
CLPB-209ENST00000538039 RHPN1Q8TCX5 695 aa17.06■□□□□ 0.32
CLPB-209ENST00000538039 SGSM2O43147 1006 aa17.05■□□□□ 0.32
CLPB-209ENST00000538039 HOXC9P31274 260 aa17.05■□□□□ 0.32
CLPB-209ENST00000538039 AMOTL2Q9Y2J4 779 aa17.05■□□□□ 0.32
CLPB-209ENST00000538039 SETD1BQ9UPS6 1966 aaKnown RBP17.05■□□□□ 0.32
CLPB-209ENST00000538039 MCM2P49736 904 aa17.05■□□□□ 0.32
CLPB-209ENST00000538039 NLRP6P59044 892 aa17.05■□□□□ 0.32
CLPB-209ENST00000538039 PTH1RQ03431 593 aa17.05■□□□□ 0.32
CLPB-209ENST00000538039 ST3GAL1Q11201 340 aa17.05■□□□□ 0.32
CLPB-209ENST00000538039 POLA2Q14181 598 aa17.05■□□□□ 0.32
CLPB-209ENST00000538039 PDCL3Q9H2J4 239 aa17.05■□□□□ 0.32
CLPB-209ENST00000538039 USP25Q9UHP3 1055 aa17.05■□□□□ 0.32
CLPB-209ENST00000538039 NGDNQ8NEJ9 315 aaKnown RBP17.05■□□□□ 0.32
CLPB-209ENST00000538039 SRGAP3O43295 1099 aa17.04■□□□□ 0.32
CLPB-209ENST00000538039 MCCP23508 829 aa17.04■□□□□ 0.32
CLPB-209ENST00000538039 HDGFL1Q5TGJ6 251 aa17.04■□□□□ 0.32
CLPB-209ENST00000538039 HCLS1P14317 486 aaPredicted RBP17.03■□□□□ 0.32
CLPB-209ENST00000538039 SYT1P21579 422 aa17.03■□□□□ 0.32
CLPB-209ENST00000538039 TTC12Q9H892 705 aaPredicted RBP17.03■□□□□ 0.32
CLPB-209ENST00000538039 TAF7Q15545 349 aaPredicted RBP17.03■□□□□ 0.32
CLPB-209ENST00000538039 RAD50Q92878 1312 aa17.03■□□□□ 0.32
CLPB-209ENST00000538039 FAM177BA6PVY3 158 aa17.02■□□□□ 0.32
CLPB-209ENST00000538039 CHPF2Q9P2E5 772 aa17.02■□□□□ 0.32
CLPB-209ENST00000538039 MARF1Q9Y4F3 1742 aaKnown RBP17.02■□□□□ 0.32
CLPB-209ENST00000538039 CCDC39Q9UFE4 941 aa17.02■□□□□ 0.31
CLPB-209ENST00000538039 PI4KAP2A4QPH2 592 aa17.01■□□□□ 0.31
CLPB-209ENST00000538039 PI4KAP1Q8N8J0 262 aa17.01■□□□□ 0.31
CLPB-209ENST00000538039 ESF1Q9H501 851 aaKnown RBP17.01■□□□□ 0.31
CLPB-209ENST00000538039 PA2G4Q9UQ80 394 aaKnown RBP17.01■□□□□ 0.31
CLPB-209ENST00000538039 MAP3K5Q99683 1374 aa17.01■□□□□ 0.31
CLPB-209ENST00000538039 FIBPO43427 364 aa17■□□□□ 0.31
CLPB-209ENST00000538039 BEND3Q5T5X7 828 aa17■□□□□ 0.31
CLPB-209ENST00000538039 GIMAP6Q6P9H5 292 aa17■□□□□ 0.31
CLPB-209ENST00000538039 TAF6LQ9Y6J9 622 aa17■□□□□ 0.31
CLPB-209ENST00000538039 WDR33Q9C0J8 1336 aaKnown RBP17■□□□□ 0.31
CLPB-209ENST00000538039 PRAMEF22A3QJZ6 481 aa17■□□□□ 0.31
CLPB-209ENST00000538039 ZSCAN22P10073 491 aaPredicted RBP17■□□□□ 0.31
CLPB-209ENST00000538039 RBM33Q96EV2 1170 aaKnown RBP17■□□□□ 0.31
CLPB-209ENST00000538039 TTC21AQ8NDW8 1320 aa16.99■□□□□ 0.31
CLPB-209ENST00000538039 CASTP20810 708 aaKnown RBP16.99■□□□□ 0.31
CLPB-209ENST00000538039 DNM1Q05193 864 aaKnown RBP16.99■□□□□ 0.31
CLPB-209ENST00000538039 CCDC83Q8IWF9 413 aa16.99■□□□□ 0.31
CLPB-209ENST00000538039 HYPKQ9NX55 129 aa16.99■□□□□ 0.31
CLPB-209ENST00000538039 STX6O43752 255 aa16.99■□□□□ 0.31
CLPB-209ENST00000538039 ADCY5O95622 1261 aa16.99■□□□□ 0.31
CLPB-209ENST00000538039 TERF1P54274 439 aa16.99■□□□□ 0.31
CLPB-209ENST00000538039 PROSER3Q2NL68 480 aa16.99■□□□□ 0.31
CLPB-209ENST00000538039 FAM173BQ6P4H8 233 aa16.99■□□□□ 0.31
CLPB-209ENST00000538039 N4BP2Q86UW6 1770 aaPredicted RBP16.99■□□□□ 0.31
CLPB-209ENST00000538039 HDGFP51858 240 aaKnown RBP16.98■□□□□ 0.31
CLPB-209ENST00000538039 NECAB1Q8N987 351 aa16.98■□□□□ 0.31
CLPB-209ENST00000538039 PTMAP06454 111 aaKnown RBP16.98■□□□□ 0.31
CLPB-209ENST00000538039 EIF4A1P60842 406 aaKnown RBP16.98■□□□□ 0.31
CLPB-209ENST00000538039 TMEM87AQ8NBN3 555 aa16.98■□□□□ 0.31
CLPB-209ENST00000538039 PLEKHG1Q9ULL1 1385 aa16.98■□□□□ 0.31
CLPB-209ENST00000538039 HTATSF1O43719 755 aaKnown RBP16.98■□□□□ 0.31
CLPB-209ENST00000538039 GLIPR1L2Q4G1C9 344 aa16.98■□□□□ 0.31
CLPB-209ENST00000538039 NBPF6Q5VWK0 638 aa16.98■□□□□ 0.31
CLPB-209ENST00000538039 NBPF4Q96M43 638 aa16.98■□□□□ 0.31
CLPB-209ENST00000538039 FUCA2Q9BTY2 467 aa16.98■□□□□ 0.31
CLPB-209ENST00000538039 ADCY9O60503 1353 aa16.97■□□□□ 0.31
CLPB-209ENST00000538039 CACNA1FO60840 1977 aa16.97■□□□□ 0.31
CLPB-209ENST00000538039 AOX1Q06278 1338 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms