RNA–Protein interactions for RNA: ENST00000537880.1

TCHP-205, Transcript of trichoplein keratin filament binding, humanhuman

TSL 1 (best)

Gene TCHP, Length 2,817 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCHP-205ENST00000537880 NUTM2EB1AL46 878 aaPredicted RBP13.68□□□□□ -0.22
TCHP-205ENST00000537880 IGHDP01880 384 aa13.68□□□□□ -0.22
TCHP-205ENST00000537880 EVA1CP58658 441 aa13.68□□□□□ -0.22
TCHP-205ENST00000537880 NUTM2AQ8IVF1 878 aaPredicted RBP13.68□□□□□ -0.22
TCHP-205ENST00000537880 ANP32BQ92688 251 aaKnown RBP13.68□□□□□ -0.22
TCHP-205ENST00000537880 PCDH11XQ9BZA7 1347 aa13.68□□□□□ -0.22
TCHP-205ENST00000537880 PCDH11YQ9BZA8 1340 aa13.68□□□□□ -0.22
TCHP-205ENST00000537880 CYP27B1O15528 508 aa13.68□□□□□ -0.22
TCHP-205ENST00000537880 BARGINQ6ZT62 677 aa13.68□□□□□ -0.22
TCHP-205ENST00000537880 UNC5CLQ8IV45 518 aa13.68□□□□□ -0.22
TCHP-205ENST00000537880 TBC1D32Q96NH3 1257 aa13.68□□□□□ -0.22
TCHP-205ENST00000537880 MBIPQ9NS73 344 aa13.68□□□□□ -0.22
TCHP-205ENST00000537880 NCLP19338 710 aaKnown RBP13.67□□□□□ -0.22
TCHP-205ENST00000537880 CCDC173Q0VFZ6 552 aa13.67□□□□□ -0.22
TCHP-205ENST00000537880 VPS72Q15906 364 aa13.67□□□□□ -0.22
TCHP-205ENST00000537880 MTERF4Q7Z6M4 381 aaKnown RBP13.67□□□□□ -0.22
TCHP-205ENST00000537880 NHSQ6T4R5 1651 aa13.67□□□□□ -0.22
TCHP-205ENST00000537880 DDX11L8A8MPP1 907 aa13.67□□□□□ -0.22
TCHP-205ENST00000537880 RNMTO43148 476 aaKnown RBP13.67□□□□□ -0.22
TCHP-205ENST00000537880 PLCD3Q8N3E9 789 aa13.67□□□□□ -0.22
TCHP-205ENST00000537880 TSR2Q969E8 191 aaKnown RBP13.66□□□□□ -0.22
TCHP-205ENST00000537880 PPP1R9BQ96SB3 815 aa13.66□□□□□ -0.22
TCHP-205ENST00000537880 CCDC94Q9BW85 323 aaPredicted RBP13.66□□□□□ -0.22
TCHP-205ENST00000537880 RTF1Q92541 710 aaKnown RBP13.65□□□□□ -0.22
TCHP-205ENST00000537880 ZNF830Q96NB3 372 aaPredicted RBP13.65□□□□□ -0.22
TCHP-205ENST00000537880 CDCA7Q9BWT1 371 aaPredicted RBP13.65□□□□□ -0.22
TCHP-205ENST00000537880 KCPQ6ZWJ8 1503 aa13.65□□□□□ -0.22
TCHP-205ENST00000537880 HEG1Q9ULI3 1381 aa13.65□□□□□ -0.22
TCHP-205ENST00000537880 IFNL2Q8IZJ0 200 aa13.65□□□□□ -0.22
TCHP-205ENST00000537880 LGR6Q9HBX8 967 aa13.65□□□□□ -0.22
TCHP-205ENST00000537880 DYNC1I1O14576 645 aa13.64□□□□□ -0.23
TCHP-205ENST00000537880 C1orf141Q5JVX7 400 aa13.64□□□□□ -0.23
TCHP-205ENST00000537880 ZCRB1Q8TBF4 217 aaKnown RBP13.64□□□□□ -0.23
TCHP-205ENST00000537880 UPF2Q9HAU5 1272 aaKnown RBP13.64□□□□□ -0.23
TCHP-205ENST00000537880 NASPP49321 788 aaPredicted RBP13.64□□□□□ -0.23
TCHP-205ENST00000537880 TJP1Q07157 1748 aa13.64□□□□□ -0.23
TCHP-205ENST00000537880 RREB1Q92766 1687 aa13.64□□□□□ -0.23
TCHP-205ENST00000537880 EXOSC9Q06265 439 aaKnown RBP13.63□□□□□ -0.23
TCHP-205ENST00000537880 DCAF5Q96JK2 942 aa13.63□□□□□ -0.23
TCHP-205ENST00000537880 SOS1Q07889 1333 aaPredicted RBP13.63□□□□□ -0.23
TCHP-205ENST00000537880 HSP90AB1P08238 724 aaKnown RBP13.63□□□□□ -0.23
TCHP-205ENST00000537880 TAF7Q15545 349 aaPredicted RBP13.63□□□□□ -0.23
TCHP-205ENST00000537880 ZNF428Q96B54 188 aa13.63□□□□□ -0.23
TCHP-205ENST00000537880 C8orf37Q96NL8 207 aa13.63□□□□□ -0.23
TCHP-205ENST00000537880 BCL2L13Q9BXK5 485 aa13.63□□□□□ -0.23
TCHP-205ENST00000537880 BCAR3O75815 825 aa13.62□□□□□ -0.23
TCHP-205ENST00000537880 BRPF1P55201 1214 aaPredicted RBP13.62□□□□□ -0.23
TCHP-205ENST00000537880 RARSP54136 660 aaKnown RBP13.62□□□□□ -0.23
TCHP-205ENST00000537880 FBXO41Q8TF61 875 aa13.62□□□□□ -0.23
TCHP-205ENST00000537880 COL5A3P25940 1745 aaPredicted RBP13.61□□□□□ -0.23
TCHP-205ENST00000537880 BCL9O00512 1426 aa13.61□□□□□ -0.23
TCHP-205ENST00000537880 MPRIPQ6WCQ1 1025 aa13.61□□□□□ -0.23
TCHP-205ENST00000537880 LY75O60449 1722 aa13.61□□□□□ -0.23
TCHP-205ENST00000537880 BTAF1O14981 1849 aa13.61□□□□□ -0.23
TCHP-205ENST00000537880 VAMP4O75379 141 aa13.6□□□□□ -0.23
TCHP-205ENST00000537880 KIF20AO95235 890 aa13.6□□□□□ -0.23
TCHP-205ENST00000537880 CBX1P83916 185 aa13.6□□□□□ -0.23
TCHP-205ENST00000537880 NGLY1Q96IV0 654 aa13.6□□□□□ -0.23
TCHP-205ENST00000537880 SLC52A2Q9HAB3 445 aa13.6□□□□□ -0.23
TCHP-205ENST00000537880 AFF2P51816 1311 aa13.6□□□□□ -0.23
TCHP-205ENST00000537880 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.6□□□□□ -0.23
TCHP-205ENST00000537880 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.6□□□□□ -0.23
TCHP-205ENST00000537880 ZBTB22O15209 634 aa13.59□□□□□ -0.23
TCHP-205ENST00000537880 ALDH1L2Q3SY69 923 aa13.59□□□□□ -0.23
TCHP-205ENST00000537880 C8orf58Q8NAV2 365 aa13.59□□□□□ -0.23
TCHP-205ENST00000537880 USP21Q9UK80 565 aa13.59□□□□□ -0.23
TCHP-205ENST00000537880 ERVV-2B6SEH9 535 aa13.59□□□□□ -0.23
TCHP-205ENST00000537880 JARID2Q92833 1246 aaPredicted RBP13.59□□□□□ -0.23
TCHP-205ENST00000537880 GTPBP4Q9BZE4 634 aaKnown RBP13.59□□□□□ -0.23
TCHP-205ENST00000537880 ZNF500O60304 480 aaPredicted RBP13.59□□□□□ -0.23
TCHP-205ENST00000537880 ONECUT3O60422 494 aaPredicted RBP13.59□□□□□ -0.23
TCHP-205ENST00000537880 TSPYL6Q8N831 410 aa13.59□□□□□ -0.23
TCHP-205ENST00000537880 NUP188Q5SRE5 1749 aa13.58□□□□□ -0.24
TCHP-205ENST00000537880 TNPO1Q92973 898 aaKnown RBP13.58□□□□□ -0.24
TCHP-205ENST00000537880 TSPYL4Q9UJ04 414 aa13.58□□□□□ -0.24
TCHP-205ENST00000537880 NOL7Q9UMY1 257 aaKnown RBP13.57□□□□□ -0.24
TCHP-205ENST00000537880 HOXB7P09629 217 aa13.57□□□□□ -0.24
TCHP-205ENST00000537880 EIF4A1P60842 406 aaKnown RBP13.57□□□□□ -0.24
TCHP-205ENST00000537880 TNNQ9UQP3 1299 aa13.57□□□□□ -0.24
TCHP-205ENST00000537880 TAF1LQ8IZX4 1826 aa13.56□□□□□ -0.24
TCHP-205ENST00000537880 LETM1O95202 739 aaPredicted RBP13.56□□□□□ -0.24
TCHP-205ENST00000537880 TWISTNBQ3B726 338 aaPredicted RBP13.56□□□□□ -0.24
TCHP-205ENST00000537880 TEFQ10587 303 aa13.56□□□□□ -0.24
TCHP-205ENST00000537880 TSC1Q92574 1164 aa13.56□□□□□ -0.24
TCHP-205ENST00000537880 RGS12O14924 1447 aa13.56□□□□□ -0.24
TCHP-205ENST00000537880 SASS6Q6UVJ0 657 aa13.55□□□□□ -0.24
TCHP-205ENST00000537880 MIS18AQ9NYP9 233 aa13.55□□□□□ -0.24
TCHP-205ENST00000537880 KRT24Q2M2I5 525 aa13.55□□□□□ -0.24
TCHP-205ENST00000537880 MEX3CQ5U5Q3 659 aaKnown RBP13.55□□□□□ -0.24
TCHP-205ENST00000537880 SSH1Q8WYL5 1049 aa13.55□□□□□ -0.24
TCHP-205ENST00000537880 CLUAP1Q96AJ1 413 aa13.55□□□□□ -0.24
TCHP-205ENST00000537880 ARFGEF2Q9Y6D5 1785 aa13.55□□□□□ -0.24
TCHP-205ENST00000537880 BTBD11A6QL63 1104 aa13.54□□□□□ -0.24
TCHP-205ENST00000537880 EXOC5O00471 708 aa13.54□□□□□ -0.24
TCHP-205ENST00000537880 GJD4Q96KN9 370 aaPredicted RBP13.54□□□□□ -0.24
TCHP-205ENST00000537880 TRPC5Q9UL62 973 aaPredicted RBP13.54□□□□□ -0.24
TCHP-205ENST00000537880 MRPL50Q8N5N7 158 aaKnown RBP13.54□□□□□ -0.24
TCHP-205ENST00000537880 RGPD3A6NKT7 1758 aaPredicted RBP13.54□□□□□ -0.24
TCHP-205ENST00000537880 RGPD4Q7Z3J3 1758 aa13.54□□□□□ -0.24
TCHP-205ENST00000537880 KCNQ3O43525 872 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms