RNA–Protein interactions for RNA: ENST00000537694.1

PPP1CA-209, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 5

Gene PPP1CA, Length 882 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-209ENST00000537694 PER1O15534 1290 aaPredicted RBP20.62■□□□□ 0.89
PPP1CA-209ENST00000537694 RRAGCQ9HB90 399 aa20.62■□□□□ 0.89
PPP1CA-209ENST00000537694 ZBTB1Q9Y2K1 713 aa20.62■□□□□ 0.89
PPP1CA-209ENST00000537694 KDM2BQ8NHM5 1336 aa20.61■□□□□ 0.89
PPP1CA-209ENST00000537694 SERPINB2P05120 415 aa20.61■□□□□ 0.89
PPP1CA-209ENST00000537694 U2SURPO15042 1029 aaKnown RBP20.6■□□□□ 0.89
PPP1CA-209ENST00000537694 STARD3NLO95772 234 aa20.6■□□□□ 0.89
PPP1CA-209ENST00000537694 BICDL1Q6ZP65 573 aa20.6■□□□□ 0.89
PPP1CA-209ENST00000537694 TTC5Q8N0Z6 440 aa20.6■□□□□ 0.89
PPP1CA-209ENST00000537694 VSIG10Q8N0Z9 540 aa20.6■□□□□ 0.89
PPP1CA-209ENST00000537694 RBM46Q8TBY0 533 aaKnown RBP20.6■□□□□ 0.89
PPP1CA-209ENST00000537694 DNAJC5GQ8N7S2 189 aa20.59■□□□□ 0.89
PPP1CA-209ENST00000537694 BCL2L12Q9HB09 334 aa20.59■□□□□ 0.89
PPP1CA-209ENST00000537694 SCN11AQ9UI33 1791 aa20.58■□□□□ 0.89
PPP1CA-209ENST00000537694 TEFQ10587 303 aa20.57■□□□□ 0.88
PPP1CA-209ENST00000537694 COL15A1P39059 1388 aa20.57■□□□□ 0.88
PPP1CA-209ENST00000537694 TJP1Q07157 1748 aa20.56■□□□□ 0.88
PPP1CA-209ENST00000537694 H0YIN7 160 aa20.56■□□□□ 0.88
PPP1CA-209ENST00000537694 C2CD5Q86YS7 1000 aa20.56■□□□□ 0.88
PPP1CA-209ENST00000537694 TTLL6Q8N841 843 aa20.56■□□□□ 0.88
PPP1CA-209ENST00000537694 IL17REQ8NFR9 667 aa20.56■□□□□ 0.88
PPP1CA-209ENST00000537694 ZNF330Q9Y3S2 320 aaPredicted RBP20.56■□□□□ 0.88
PPP1CA-209ENST00000537694 A0A087WZG4 1122 aa20.55■□□□□ 0.88
PPP1CA-209ENST00000537694 GNAT3A8MTJ3 354 aa20.55■□□□□ 0.88
PPP1CA-209ENST00000537694 HTRA3P83110 453 aa20.55■□□□□ 0.88
PPP1CA-209ENST00000537694 RASSF7Q02833 373 aa20.55■□□□□ 0.88
PPP1CA-209ENST00000537694 EIF5P55010 431 aaKnown RBP20.54■□□□□ 0.88
PPP1CA-209ENST00000537694 FSTL1Q12841 308 aa20.54■□□□□ 0.88
PPP1CA-209ENST00000537694 ZNF496Q96IT1 587 aaPredicted RBP20.54■□□□□ 0.88
PPP1CA-209ENST00000537694 TEX13AQ9BXU3 409 aaPredicted RBP20.54■□□□□ 0.88
PPP1CA-209ENST00000537694 KCPQ6ZWJ8 1503 aa20.53■□□□□ 0.88
PPP1CA-209ENST00000537694 LMNB1P20700 586 aa20.53■□□□□ 0.88
PPP1CA-209ENST00000537694 ZNF790Q6PG37 636 aa20.53■□□□□ 0.88
PPP1CA-209ENST00000537694 NPM2Q86SE8 214 aaKnown RBP20.53■□□□□ 0.88
PPP1CA-209ENST00000537694 GAS2L2Q8NHY3 880 aa20.53■□□□□ 0.88
PPP1CA-209ENST00000537694 TBC1D2BQ9UPU7 963 aa20.53■□□□□ 0.88
PPP1CA-209ENST00000537694 BRCA1P38398 1863 aaKnown RBP20.53■□□□□ 0.88
PPP1CA-209ENST00000537694 ARFGEF1Q9Y6D6 1849 aa20.52■□□□□ 0.88
PPP1CA-209ENST00000537694 TBC1D9BQ66K14 1250 aa20.51■□□□□ 0.87
PPP1CA-209ENST00000537694 ZNF622Q969S3 477 aaKnown RBP eCLIP20.51■□□□□ 0.87
PPP1CA-209ENST00000537694 CCDC24Q8N4L8 307 aa20.5■□□□□ 0.87
PPP1CA-209ENST00000537694 ZNF219Q9P2Y4 722 aaPredicted RBP20.5■□□□□ 0.87
PPP1CA-209ENST00000537694 A1BGP04217 495 aa20.49■□□□□ 0.87
PPP1CA-209ENST00000537694 VEGFAP15692 232 aaPredicted RBP20.49■□□□□ 0.87
PPP1CA-209ENST00000537694 PRELPP51888 382 aa20.49■□□□□ 0.87
PPP1CA-209ENST00000537694 FMNL2Q96PY5 1086 aa20.49■□□□□ 0.87
PPP1CA-209ENST00000537694 MRC1P22897 1456 aa20.49■□□□□ 0.87
PPP1CA-209ENST00000537694 ADAMTS7Q9UKP4 1686 aa20.48■□□□□ 0.87
PPP1CA-209ENST00000537694 GLTPD2A6NH11 291 aa20.48■□□□□ 0.87
PPP1CA-209ENST00000537694 NPHP1O15259 732 aa20.48■□□□□ 0.87
PPP1CA-209ENST00000537694 PDE6BP35913 854 aa20.48■□□□□ 0.87
PPP1CA-209ENST00000537694 SMC1BQ8NDV3 1235 aa20.48■□□□□ 0.87
PPP1CA-209ENST00000537694 BRIP1Q9BX63 1249 aa20.48■□□□□ 0.87
PPP1CA-209ENST00000537694 HEG1Q9ULI3 1381 aa20.47■□□□□ 0.87
PPP1CA-209ENST00000537694 BTBD11A6QL63 1104 aa20.47■□□□□ 0.87
PPP1CA-209ENST00000537694 IL6STP40189 918 aaPredicted RBP20.47■□□□□ 0.87
PPP1CA-209ENST00000537694 KLRG1Q96E93 195 aa20.47■□□□□ 0.87
PPP1CA-209ENST00000537694 PHACTR3Q96KR7 559 aa20.47■□□□□ 0.87
PPP1CA-209ENST00000537694 SETDB2Q96T68 719 aa20.47■□□□□ 0.87
PPP1CA-209ENST00000537694 KCNQ3O43525 872 aa20.46■□□□□ 0.87
PPP1CA-209ENST00000537694 C21orf2O43822 256 aa20.46■□□□□ 0.87
PPP1CA-209ENST00000537694 DPY19L2Q6NUT2 758 aa20.46■□□□□ 0.87
PPP1CA-209ENST00000537694 CFAP53Q96M91 514 aa20.46■□□□□ 0.87
PPP1CA-209ENST00000537694 ZC3H4Q9UPT8 1303 aaKnown RBP20.46■□□□□ 0.87
PPP1CA-209ENST00000537694 CARMIL3Q8ND23 1372 aa20.46■□□□□ 0.87
PPP1CA-209ENST00000537694 PRKAR2BP31323 418 aa20.45■□□□□ 0.86
PPP1CA-209ENST00000537694 PRR5LQ6MZQ0 368 aa20.45■□□□□ 0.86
PPP1CA-209ENST00000537694 PDZRN3Q9UPQ7 1066 aa20.45■□□□□ 0.86
PPP1CA-209ENST00000537694 SBF1O95248 1867 aa20.45■□□□□ 0.86
PPP1CA-209ENST00000537694 AFDNP55196 1824 aaKnown RBP20.44■□□□□ 0.86
PPP1CA-209ENST00000537694 NFKBIEO00221 500 aa20.44■□□□□ 0.86
PPP1CA-209ENST00000537694 NUDCQ9Y266 331 aa20.43■□□□□ 0.86
PPP1CA-209ENST00000537694 USP16Q9Y5T5 823 aa20.43■□□□□ 0.86
PPP1CA-209ENST00000537694 NPC1L1Q9UHC9 1359 aa20.43■□□□□ 0.86
PPP1CA-209ENST00000537694 ERFEQ4G0M1 354 aa20.42■□□□□ 0.86
PPP1CA-209ENST00000537694 DZIP3Q86Y13 1208 aaKnown RBP20.42■□□□□ 0.86
PPP1CA-209ENST00000537694 CNBD1Q8NA66 436 aa20.42■□□□□ 0.86
PPP1CA-209ENST00000537694 RTF1Q92541 710 aaKnown RBP20.42■□□□□ 0.86
PPP1CA-209ENST00000537694 CAMTA2O94983 1202 aa20.41■□□□□ 0.86
PPP1CA-209ENST00000537694 U2AF1L5P0DN76 240 aaPredicted RBP20.41■□□□□ 0.86
PPP1CA-209ENST00000537694 PIP4K2AP48426 406 aaPredicted RBP20.41■□□□□ 0.86
PPP1CA-209ENST00000537694 U2AF1Q01081 240 aaKnown RBP eCLIP20.41■□□□□ 0.86
PPP1CA-209ENST00000537694 VIRMAQ69YN4 1812 aaKnown RBP20.41■□□□□ 0.86
PPP1CA-209ENST00000537694 ST5P78524 1137 aa20.4■□□□□ 0.86
PPP1CA-209ENST00000537694 JMYQ8N9B5 988 aa20.4■□□□□ 0.86
PPP1CA-209ENST00000537694 CNKSR1Q969H4 720 aa20.4■□□□□ 0.86
PPP1CA-209ENST00000537694 RSPH6AQ9H0K4 717 aa20.4■□□□□ 0.86
PPP1CA-209ENST00000537694 NRXN2Q9P2S2 1712 aa20.39■□□□□ 0.85
PPP1CA-209ENST00000537694 COL3A1P02461 1466 aaPredicted RBP20.38■□□□□ 0.85
PPP1CA-209ENST00000537694 PRAMEF22A3QJZ6 481 aa20.38■□□□□ 0.85
PPP1CA-209ENST00000537694 POTECB2RU33 542 aa20.38■□□□□ 0.85
PPP1CA-209ENST00000537694 SNRPA1P09661 255 aaKnown RBP20.38■□□□□ 0.85
PPP1CA-209ENST00000537694 MCM10Q7L590 875 aa20.38■□□□□ 0.85
PPP1CA-209ENST00000537694 CEMIPQ8WUJ3 1361 aa20.37■□□□□ 0.85
PPP1CA-209ENST00000537694 NBPF5PQ86XG9 351 aaPredicted RBP20.37■□□□□ 0.85
PPP1CA-209ENST00000537694 TAOK3Q9H2K8 898 aa20.37■□□□□ 0.85
PPP1CA-209ENST00000537694 WDR90Q96KV7 1748 aa20.36■□□□□ 0.85
PPP1CA-209ENST00000537694 SRGNP10124 158 aa20.36■□□□□ 0.85
PPP1CA-209ENST00000537694 COL13A1Q5TAT6 717 aaPredicted RBP20.36■□□□□ 0.85
PPP1CA-209ENST00000537694 STYK1Q6J9G0 422 aa20.36■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms