RNA–Protein interactions for RNA: ENST00000537606.5

SNX17-210, Transcript of sorting nexin 17, humanhuman

TSL 2 BASIC

Gene SNX17, Length 2,400 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-210ENST00000537606 PIP4K2AP48426 406 aaPredicted RBP21.63■■□□□ 1.05
SNX17-210ENST00000537606 SPRYD3Q8NCJ5 442 aa21.63■■□□□ 1.05
SNX17-210ENST00000537606 ADAMTS7Q9UKP4 1686 aa21.63■■□□□ 1.05
SNX17-210ENST00000537606 PDIA6Q15084 440 aa21.63■■□□□ 1.05
SNX17-210ENST00000537606 TSHZ3Q63HK5 1081 aa21.63■■□□□ 1.05
SNX17-210ENST00000537606 SCN11AQ9UI33 1791 aa21.62■■□□□ 1.05
SNX17-210ENST00000537606 CABP4P57796 275 aa21.62■■□□□ 1.05
SNX17-210ENST00000537606 LARP1Q6PKG0 1096 aaKnown RBP21.62■■□□□ 1.05
SNX17-210ENST00000537606 FRAT2O75474 233 aaPredicted RBP21.61■■□□□ 1.05
SNX17-210ENST00000537606 EVA1CP58658 441 aa21.61■■□□□ 1.05
SNX17-210ENST00000537606 CWF19L2Q2TBE0 894 aaKnown RBP21.61■■□□□ 1.05
SNX17-210ENST00000537606 PPP1R42Q7Z4L9 355 aa21.61■■□□□ 1.05
SNX17-210ENST00000537606 USP16Q9Y5T5 823 aa21.61■■□□□ 1.05
SNX17-210ENST00000537606 KSR2Q6VAB6 950 aa21.61■■□□□ 1.05
SNX17-210ENST00000537606 TTC5Q8N0Z6 440 aa21.61■■□□□ 1.05
SNX17-210ENST00000537606 DDX21Q9NR30 783 aaKnown RBP eCLIP21.61■■□□□ 1.05
SNX17-210ENST00000537606 HYPKQ9NX55 129 aa21.61■■□□□ 1.05
SNX17-210ENST00000537606 ZCRB1Q8TBF4 217 aaKnown RBP21.6■■□□□ 1.05
SNX17-210ENST00000537606 CDC45O75419 566 aa21.6■■□□□ 1.05
SNX17-210ENST00000537606 LRRCC1Q9C099 1032 aa21.6■■□□□ 1.05
SNX17-210ENST00000537606 COL5A2P05997 1499 aaPredicted RBP21.6■■□□□ 1.05
SNX17-210ENST00000537606 ABCC6O95255 1503 aa21.6■■□□□ 1.05
SNX17-210ENST00000537606 SDSP20132 328 aa21.59■■□□□ 1.05
SNX17-210ENST00000537606 DDX54Q8TDD1 881 aaKnown RBP21.59■■□□□ 1.05
SNX17-210ENST00000537606 SRGAP3O43295 1099 aa21.58■■□□□ 1.05
SNX17-210ENST00000537606 HSP90AB1P08238 724 aaKnown RBP21.58■■□□□ 1.04
SNX17-210ENST00000537606 IL1RAPL2Q9NP60 686 aa21.58■■□□□ 1.04
SNX17-210ENST00000537606 PDE1AP54750 535 aa21.57■■□□□ 1.04
SNX17-210ENST00000537606 SSH3Q8TE77 659 aa21.57■■□□□ 1.04
SNX17-210ENST00000537606 C9orf78Q9NZ63 289 aaPredicted RBP21.57■■□□□ 1.04
SNX17-210ENST00000537606 IBTKQ9P2D0 1353 aaPredicted RBP21.57■■□□□ 1.04
SNX17-210ENST00000537606 SURF6O75683 361 aaKnown RBP21.57■■□□□ 1.04
SNX17-210ENST00000537606 N4BP2Q86UW6 1770 aaPredicted RBP21.56■■□□□ 1.04
SNX17-210ENST00000537606 SNRPA1P09661 255 aaKnown RBP21.56■■□□□ 1.04
SNX17-210ENST00000537606 IL2RBP14784 551 aa21.56■■□□□ 1.04
SNX17-210ENST00000537606 RIC3Q7Z5B4 369 aa21.56■■□□□ 1.04
SNX17-210ENST00000537606 XAGE3Q8WTP9 111 aa21.56■■□□□ 1.04
SNX17-210ENST00000537606 CARD10Q9BWT7 1032 aa21.56■■□□□ 1.04
SNX17-210ENST00000537606 RBM25P49756 843 aaKnown RBP21.55■■□□□ 1.04
SNX17-210ENST00000537606 COPS6Q7L5N1 327 aa21.55■■□□□ 1.04
SNX17-210ENST00000537606 FMNL2Q96PY5 1086 aa21.55■■□□□ 1.04
SNX17-210ENST00000537606 PKD1L3Q7Z443 1732 aa21.55■■□□□ 1.04
SNX17-210ENST00000537606 C5P01031 1676 aa21.55■■□□□ 1.04
SNX17-210ENST00000537606 ANTXR1Q9H6X2 564 aa21.55■■□□□ 1.04
SNX17-210ENST00000537606 PCDH11XQ9BZA7 1347 aa21.54■■□□□ 1.04
SNX17-210ENST00000537606 PCDH11YQ9BZA8 1340 aa21.54■■□□□ 1.04
SNX17-210ENST00000537606 DDX58O95786 925 aaKnown RBP21.54■■□□□ 1.04
SNX17-210ENST00000537606 POLA2Q14181 598 aa21.54■■□□□ 1.04
SNX17-210ENST00000537606 BTG4Q9NY30 223 aa21.53■■□□□ 1.04
SNX17-210ENST00000537606 ALDH1L1O75891 902 aa21.52■■□□□ 1.04
SNX17-210ENST00000537606 NUTM1Q86Y26 1132 aa21.52■■□□□ 1.04
SNX17-210ENST00000537606 ABCA3Q99758 1704 aa21.52■■□□□ 1.04
SNX17-210ENST00000537606 MX1P20591 662 aa21.51■■□□□ 1.03
SNX17-210ENST00000537606 LINS1Q8NG48 757 aa21.51■■□□□ 1.03
SNX17-210ENST00000537606 OSBPL3Q9H4L5 887 aa21.51■■□□□ 1.03
SNX17-210ENST00000537606 SALL3Q9BXA9 1300 aa21.51■■□□□ 1.03
SNX17-210ENST00000537606 IGKV5-2P06315 115 aa21.51■■□□□ 1.03
SNX17-210ENST00000537606 MRC1P22897 1456 aa21.51■■□□□ 1.03
SNX17-210ENST00000537606 KIF2CQ99661 725 aa21.5■■□□□ 1.03
SNX17-210ENST00000537606 NHSL1Q5SYE7 1610 aa21.5■■□□□ 1.03
SNX17-210ENST00000537606 PTCD1O75127 700 aaKnown RBP21.5■■□□□ 1.03
SNX17-210ENST00000537606 RHPN1Q8TCX5 695 aa21.49■■□□□ 1.03
SNX17-210ENST00000537606 MYD88Q99836 296 aa21.49■■□□□ 1.03
SNX17-210ENST00000537606 GRM8O00222 908 aa21.49■■□□□ 1.03
SNX17-210ENST00000537606 LRP10Q7Z4F1 713 aa21.49■■□□□ 1.03
SNX17-210ENST00000537606 JARID2Q92833 1246 aaPredicted RBP21.49■■□□□ 1.03
SNX17-210ENST00000537606 RBM42Q9BTD8 480 aaKnown RBP21.49■■□□□ 1.03
SNX17-210ENST00000537606 SUCLG2Q96I99 432 aa21.48■■□□□ 1.03
SNX17-210ENST00000537606 PA2G4Q9UQ80 394 aaKnown RBP21.48■■□□□ 1.03
SNX17-210ENST00000537606 PLEKHG2Q9H7P9 1386 aa21.48■■□□□ 1.03
SNX17-210ENST00000537606 ANKRD13DQ6ZTN6 518 aa21.48■■□□□ 1.03
SNX17-210ENST00000537606 KAZALD1Q96I82 304 aa21.47■■□□□ 1.03
SNX17-210ENST00000537606 PARP4Q9UKK3 1724 aaKnown RBP21.47■■□□□ 1.03
SNX17-210ENST00000537606 TRIM6-TRIM34B2RNG4 842 aa21.47■■□□□ 1.03
SNX17-210ENST00000537606 OS9Q13438 667 aaPredicted RBP21.47■■□□□ 1.03
SNX17-210ENST00000537606 RILPL2Q969X0 211 aa21.47■■□□□ 1.03
SNX17-210ENST00000537606 ERVV-2B6SEH9 535 aa21.46■■□□□ 1.03
SNX17-210ENST00000537606 RAB11FIP3O75154 756 aa21.46■■□□□ 1.03
SNX17-210ENST00000537606 NEXNQ0ZGT2 675 aa21.46■■□□□ 1.03
SNX17-210ENST00000537606 HSCBQ8IWL3 235 aa21.46■■□□□ 1.03
SNX17-210ENST00000537606 NEURL1BA8MQ27 555 aa21.46■■□□□ 1.03
SNX17-210ENST00000537606 BICC1Q9H694 974 aaKnown RBP21.46■■□□□ 1.03
SNX17-210ENST00000537606 NKX1-1Q15270 411 aaPredicted RBP21.45■■□□□ 1.02
SNX17-210ENST00000537606 CASC1Q6TDU7 716 aa21.45■■□□□ 1.02
SNX17-210ENST00000537606 METTL22Q9BUU2 404 aaPredicted RBP21.45■■□□□ 1.02
SNX17-210ENST00000537606 UNC5CLQ8IV45 518 aa21.45■■□□□ 1.02
SNX17-210ENST00000537606 KIF1BPQ96EK5 621 aa21.45■■□□□ 1.02
SNX17-210ENST00000537606 ATP5J2-PTCD1G3V325 749 aa21.44■■□□□ 1.02
SNX17-210ENST00000537606 CD2BP2O95400 341 aaKnown RBP21.44■■□□□ 1.02
SNX17-210ENST00000537606 MAP4K4O95819 1239 aaPredicted RBP21.44■■□□□ 1.02
SNX17-210ENST00000537606 A1BGP04217 495 aa21.44■■□□□ 1.02
SNX17-210ENST00000537606 USP26Q9BXU7 913 aa21.44■■□□□ 1.02
SNX17-210ENST00000537606 NBPF26B4DH59 902 aa21.44■■□□□ 1.02
SNX17-210ENST00000537606 MTX1Q13505 466 aa21.44■■□□□ 1.02
SNX17-210ENST00000537606 NBPF14Q5TI25 921 aa21.44■■□□□ 1.02
SNX17-210ENST00000537606 NBPF10Q6P3W6 841 aaKnown RBP21.44■■□□□ 1.02
SNX17-210ENST00000537606 NBPF15Q8N660 670 aa21.44■■□□□ 1.02
SNX17-210ENST00000537606 GCKRQ14397 625 aa21.43■■□□□ 1.02
SNX17-210ENST00000537606 STAP2Q9UGK3 403 aa21.43■■□□□ 1.02
SNX17-210ENST00000537606 ROBO1Q9Y6N7 1651 aa21.41■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms