RNA–Protein interactions for RNA: ENST00000537358.1

CCDC170-202, Transcript of coiled-coil domain containing 170, humanhuman

TSL 3

Gene CCDC170, Length 574 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC170-202ENST00000537358 BCS1LQ9Y276 419 aa13.19□□□□□ -0.3
CCDC170-202ENST00000537358 SLC39A6Q13433 755 aa13.18□□□□□ -0.3
CCDC170-202ENST00000537358 VSIG10Q8N0Z9 540 aa13.18□□□□□ -0.3
CCDC170-202ENST00000537358 SRP68Q9UHB9 627 aaKnown RBP13.18□□□□□ -0.3
CCDC170-202ENST00000537358 ADAMTS7Q9UKP4 1686 aa13.18□□□□□ -0.3
CCDC170-202ENST00000537358 A0A0G2JLW4 131 aa13.17□□□□□ -0.3
CCDC170-202ENST00000537358 GNAT3A8MTJ3 354 aa13.17□□□□□ -0.3
CCDC170-202ENST00000537358 FCHSD2O94868 740 aa13.17□□□□□ -0.3
CCDC170-202ENST00000537358 STARD3NLO95772 234 aa13.17□□□□□ -0.3
CCDC170-202ENST00000537358 INTS5Q6P9B9 1019 aaKnown RBP13.17□□□□□ -0.3
CCDC170-202ENST00000537358 COL3A1P02461 1466 aaPredicted RBP13.16□□□□□ -0.3
CCDC170-202ENST00000537358 KIAA1551Q9HCM1 1747 aa13.16□□□□□ -0.3
CCDC170-202ENST00000537358 SOS1Q07889 1333 aaPredicted RBP13.16□□□□□ -0.3
CCDC170-202ENST00000537358 CYP19A1P11511 503 aaPredicted RBP13.16□□□□□ -0.3
CCDC170-202ENST00000537358 DPEP1P16444 411 aa13.16□□□□□ -0.3
CCDC170-202ENST00000537358 FKBP8Q14318 412 aa13.16□□□□□ -0.3
CCDC170-202ENST00000537358 NPM2Q86SE8 214 aaKnown RBP13.16□□□□□ -0.3
CCDC170-202ENST00000537358 ZNF526Q8TF50 670 aaPredicted RBP13.16□□□□□ -0.3
CCDC170-202ENST00000537358 ADCY9O60503 1353 aa13.16□□□□□ -0.3
CCDC170-202ENST00000537358 COL15A1P39059 1388 aa13.16□□□□□ -0.3
CCDC170-202ENST00000537358 UBR2Q8IWV8 1755 aa13.15□□□□□ -0.3
CCDC170-202ENST00000537358 KCPQ6ZWJ8 1503 aa13.15□□□□□ -0.3
CCDC170-202ENST00000537358 BRCA1P38398 1863 aaKnown RBP13.15□□□□□ -0.3
CCDC170-202ENST00000537358 USPL1Q5W0Q7 1092 aa13.15□□□□□ -0.3
CCDC170-202ENST00000537358 ARHGAP27Q6ZUM4 889 aa13.15□□□□□ -0.3
CCDC170-202ENST00000537358 TEX13AQ9BXU3 409 aaPredicted RBP13.15□□□□□ -0.3
CCDC170-202ENST00000537358 PIM2Q9P1W9 311 aa13.15□□□□□ -0.3
CCDC170-202ENST00000537358 ARFGEF1Q9Y6D6 1849 aa13.15□□□□□ -0.3
CCDC170-202ENST00000537358 A0A087WZG4 1122 aa13.14□□□□□ -0.31
CCDC170-202ENST00000537358 DALRD3Q5D0E6 543 aaKnown RBP13.14□□□□□ -0.31
CCDC170-202ENST00000537358 NARFQ9UHQ1 456 aa13.14□□□□□ -0.31
CCDC170-202ENST00000537358 ZBTB1Q9Y2K1 713 aa13.14□□□□□ -0.31
CCDC170-202ENST00000537358 NEFMP07197 916 aa13.13□□□□□ -0.31
CCDC170-202ENST00000537358 CANXP27824 592 aaKnown RBP13.13□□□□□ -0.31
CCDC170-202ENST00000537358 ZNF790Q6PG37 636 aa13.13□□□□□ -0.31
CCDC170-202ENST00000537358 RTF1Q92541 710 aaKnown RBP13.13□□□□□ -0.31
CCDC170-202ENST00000537358 SIPA1L3O60292 1781 aaPredicted RBP13.12□□□□□ -0.31
CCDC170-202ENST00000537358 POLRMTO00411 1230 aaKnown RBP13.12□□□□□ -0.31
CCDC170-202ENST00000537358 U2AF1L5P0DN76 240 aaPredicted RBP13.12□□□□□ -0.31
CCDC170-202ENST00000537358 TM4SF1P30408 202 aa13.12□□□□□ -0.31
CCDC170-202ENST00000537358 PRKAR2BP31323 418 aa13.12□□□□□ -0.31
CCDC170-202ENST00000537358 U2AF1Q01081 240 aaKnown RBP eCLIP13.12□□□□□ -0.31
CCDC170-202ENST00000537358 DDR1Q08345 913 aa13.12□□□□□ -0.31
CCDC170-202ENST00000537358 FMNL2Q96PY5 1086 aa13.12□□□□□ -0.31
CCDC170-202ENST00000537358 AFDNP55196 1824 aaKnown RBP13.11□□□□□ -0.31
CCDC170-202ENST00000537358 HEG1Q9ULI3 1381 aa13.11□□□□□ -0.31
CCDC170-202ENST00000537358 IL17REQ8NFR9 667 aa13.11□□□□□ -0.31
CCDC170-202ENST00000537358 ZNF330Q9Y3S2 320 aaPredicted RBP13.11□□□□□ -0.31
CCDC170-202ENST00000537358 BTBD11A6QL63 1104 aa13.1□□□□□ -0.31
CCDC170-202ENST00000537358 PPP2R1AP30153 589 aa13.1□□□□□ -0.31
CCDC170-202ENST00000537358 NFIXQ14938 502 aa13.1□□□□□ -0.31
CCDC170-202ENST00000537358 ZNF496Q96IT1 587 aaPredicted RBP13.1□□□□□ -0.31
CCDC170-202ENST00000537358 RSPH6AQ9H0K4 717 aa13.1□□□□□ -0.31
CCDC170-202ENST00000537358 SERPINB2P05120 415 aa13.09□□□□□ -0.31
CCDC170-202ENST00000537358 KCNA3P22001 575 aa13.09□□□□□ -0.31
CCDC170-202ENST00000537358 CEMIPQ8WUJ3 1361 aa13.08□□□□□ -0.31
CCDC170-202ENST00000537358 NPHP1O15259 732 aa13.08□□□□□ -0.32
CCDC170-202ENST00000537358 CHRNA5P30532 468 aa13.08□□□□□ -0.32
CCDC170-202ENST00000537358 IL6STP40189 918 aaPredicted RBP13.08□□□□□ -0.32
CCDC170-202ENST00000537358 EIF5P55010 431 aaKnown RBP13.08□□□□□ -0.32
CCDC170-202ENST00000537358 PHACTR3Q96KR7 559 aa13.08□□□□□ -0.32
CCDC170-202ENST00000537358 NRXN2Q9P2S2 1712 aa13.08□□□□□ -0.32
CCDC170-202ENST00000537358 H0YIN7 160 aa13.07□□□□□ -0.32
CCDC170-202ENST00000537358 C9orf131Q5VYM1 1079 aa13.07□□□□□ -0.32
CCDC170-202ENST00000537358 BICDL1Q6ZP65 573 aa13.07□□□□□ -0.32
CCDC170-202ENST00000537358 PDZRN3Q9UPQ7 1066 aa13.07□□□□□ -0.32
CCDC170-202ENST00000537358 SCN7AQ01118 1682 aa13.06□□□□□ -0.32
CCDC170-202ENST00000537358 HTATSF1O43719 755 aaKnown RBP13.06□□□□□ -0.32
CCDC170-202ENST00000537358 HSPA6P17066 643 aa13.06□□□□□ -0.32
CCDC170-202ENST00000537358 C16orf71Q8IYS4 520 aaPredicted RBP13.06□□□□□ -0.32
CCDC170-202ENST00000537358 TTLL6Q8N841 843 aa13.06□□□□□ -0.32
CCDC170-202ENST00000537358 RNF181Q9P0P0 153 aa13.06□□□□□ -0.32
CCDC170-202ENST00000537358 DLEC1Q9Y238 1755 aa13.06□□□□□ -0.32
CCDC170-202ENST00000537358 KDM2BQ8NHM5 1336 aa13.06□□□□□ -0.32
CCDC170-202ENST00000537358 CARMIL3Q8ND23 1372 aa13.06□□□□□ -0.32
CCDC170-202ENST00000537358 PDE6BP35913 854 aa13.05□□□□□ -0.32
CCDC170-202ENST00000537358 C2CD5Q86YS7 1000 aa13.05□□□□□ -0.32
CCDC170-202ENST00000537358 SETDB2Q96T68 719 aa13.05□□□□□ -0.32
CCDC170-202ENST00000537358 PNNQ9H307 717 aaKnown RBP13.05□□□□□ -0.32
CCDC170-202ENST00000537358 BCL2L12Q9HB09 334 aa13.05□□□□□ -0.32
CCDC170-202ENST00000537358 TBC1D2BQ9UPU7 963 aa13.05□□□□□ -0.32
CCDC170-202ENST00000537358 SBF1O95248 1867 aa13.04□□□□□ -0.32
CCDC170-202ENST00000537358 KIF3CO14782 793 aa13.04□□□□□ -0.32
CCDC170-202ENST00000537358 TOMM70O94826 608 aa13.04□□□□□ -0.32
CCDC170-202ENST00000537358 A1BGP04217 495 aa13.04□□□□□ -0.32
CCDC170-202ENST00000537358 SNRPA1P09661 255 aaKnown RBP13.04□□□□□ -0.32
CCDC170-202ENST00000537358 MCM10Q7L590 875 aa13.04□□□□□ -0.32
CCDC170-202ENST00000537358 ZNF652Q9Y2D9 606 aa13.04□□□□□ -0.32
CCDC170-202ENST00000537358 ST5P78524 1137 aa13.03□□□□□ -0.32
CCDC170-202ENST00000537358 TBC1D9BQ66K14 1250 aa13.03□□□□□ -0.32
CCDC170-202ENST00000537358 DZIP3Q86Y13 1208 aaKnown RBP13.03□□□□□ -0.32
CCDC170-202ENST00000537358 ZC3H4Q9UPT8 1303 aaKnown RBP13.03□□□□□ -0.32
CCDC170-202ENST00000537358 KCNQ3O43525 872 aa13.02□□□□□ -0.33
CCDC170-202ENST00000537358 DSG3P32926 999 aa13.02□□□□□ -0.33
CCDC170-202ENST00000537358 TAF7Q15545 349 aaPredicted RBP13.02□□□□□ -0.33
CCDC170-202ENST00000537358 CNBD1Q8NA66 436 aa13.02□□□□□ -0.33
CCDC170-202ENST00000537358 ZNF622Q969S3 477 aaKnown RBP eCLIP13.02□□□□□ -0.33
CCDC170-202ENST00000537358 BRIP1Q9BX63 1249 aa13.02□□□□□ -0.33
CCDC170-202ENST00000537358 TNRC6CQ9HCJ0 1690 aaKnown RBP13.02□□□□□ -0.33
CCDC170-202ENST00000537358 BCORQ6W2J9 1755 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms