RNA–Protein interactions for RNA: ENST00000537320.5

TNC-211, Transcript of tenascin C, humanhuman

TSL 5 BASIC

Gene TNC, Length 4,946 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-211ENST00000537320 ANKRD18BA2A2Z9 1011 aa13.47□□□□□ -0.25
TNC-211ENST00000537320 VAMP4O75379 141 aa13.47□□□□□ -0.25
TNC-211ENST00000537320 CCDC70Q6NSX1 233 aa13.47□□□□□ -0.25
TNC-211ENST00000537320 TRIM5Q9C035 493 aa13.47□□□□□ -0.25
TNC-211ENST00000537320 DDX11Q96FC9 970 aa13.47□□□□□ -0.25
TNC-211ENST00000537320 TRPM2O94759 1503 aa13.47□□□□□ -0.25
TNC-211ENST00000537320 RSPH6AQ9H0K4 717 aa13.47□□□□□ -0.25
TNC-211ENST00000537320 MBD5Q9P267 1494 aa13.47□□□□□ -0.25
TNC-211ENST00000537320 CCDC83Q8IWF9 413 aa13.46□□□□□ -0.25
TNC-211ENST00000537320 XAGE3Q8WTP9 111 aa13.46□□□□□ -0.25
TNC-211ENST00000537320 RBM5P52756 815 aaKnown RBP eCLIP13.46□□□□□ -0.25
TNC-211ENST00000537320 NUCB1Q02818 461 aa13.46□□□□□ -0.25
TNC-211ENST00000537320 COPS6Q7L5N1 327 aa13.46□□□□□ -0.25
TNC-211ENST00000537320 RLBP1P12271 317 aa13.46□□□□□ -0.25
TNC-211ENST00000537320 CAVIN4Q5BKX8 364 aa13.46□□□□□ -0.25
TNC-211ENST00000537320 CDKL5O76039 1030 aa13.46□□□□□ -0.26
TNC-211ENST00000537320 TTC22Q5TAA0 569 aa13.46□□□□□ -0.26
TNC-211ENST00000537320 TBC1D2Q9BYX2 928 aa13.46□□□□□ -0.26
TNC-211ENST00000537320 HOXC9P31274 260 aa13.45□□□□□ -0.26
TNC-211ENST00000537320 FAM43AQ8N2R8 423 aa13.45□□□□□ -0.26
TNC-211ENST00000537320 ABCA8O94911 1581 aa13.45□□□□□ -0.26
TNC-211ENST00000537320 NPC1L1Q9UHC9 1359 aa13.45□□□□□ -0.26
TNC-211ENST00000537320 LDHAL6AQ6ZMR3 332 aa13.45□□□□□ -0.26
TNC-211ENST00000537320 RHPN1Q8TCX5 695 aa13.45□□□□□ -0.26
TNC-211ENST00000537320 EVI5LQ96CN4 794 aa13.45□□□□□ -0.26
TNC-211ENST00000537320 SPATA32Q96LK8 384 aa13.45□□□□□ -0.26
TNC-211ENST00000537320 NEO1Q92859 1461 aa13.45□□□□□ -0.26
TNC-211ENST00000537320 CFAP65Q6ZU64 1925 aaKnown RBP13.45□□□□□ -0.26
TNC-211ENST00000537320 TXLNAP40222 546 aa13.45□□□□□ -0.26
TNC-211ENST00000537320 ANKRD44Q8N8A2 993 aa13.45□□□□□ -0.26
TNC-211ENST00000537320 ARHGEF5Q12774 1597 aa13.45□□□□□ -0.26
TNC-211ENST00000537320 FERMT3Q86UX7 667 aa13.44□□□□□ -0.26
TNC-211ENST00000537320 TNMDQ9H2S6 317 aa13.44□□□□□ -0.26
TNC-211ENST00000537320 CCDC39Q9UFE4 941 aa13.44□□□□□ -0.26
TNC-211ENST00000537320 GCC2Q8IWJ2 1684 aa13.44□□□□□ -0.26
TNC-211ENST00000537320 SLC5A1P13866 664 aa13.44□□□□□ -0.26
TNC-211ENST00000537320 PIP4K2AP48426 406 aaPredicted RBP13.44□□□□□ -0.26
TNC-211ENST00000537320 MAP3K12Q12852 859 aa13.43□□□□□ -0.26
TNC-211ENST00000537320 NFATC2IPQ8NCF5 419 aa13.43□□□□□ -0.26
TNC-211ENST00000537320 A0A0U1RQG5 324 aaPredicted RBP13.43□□□□□ -0.26
TNC-211ENST00000537320 MINDY4BA8MYZ0 360 aa13.43□□□□□ -0.26
TNC-211ENST00000537320 GOLIM4O00461 696 aa13.43□□□□□ -0.26
TNC-211ENST00000537320 PDILTQ8N807 584 aa13.43□□□□□ -0.26
TNC-211ENST00000537320 IP6K1Q92551 441 aa13.43□□□□□ -0.26
TNC-211ENST00000537320 SNRKQ9NRH2 765 aa13.43□□□□□ -0.26
TNC-211ENST00000537320 CCDC192P0DO97 292 aa13.43□□□□□ -0.26
TNC-211ENST00000537320 KSR2Q6VAB6 950 aa13.43□□□□□ -0.26
TNC-211ENST00000537320 NAPBQ9H115 298 aa13.43□□□□□ -0.26
TNC-211ENST00000537320 CFAP45Q9UL16 551 aa13.43□□□□□ -0.26
TNC-211ENST00000537320 ZSCAN29Q8IWY8 852 aaPredicted RBP13.43□□□□□ -0.26
TNC-211ENST00000537320 ANKIB1Q9P2G1 1089 aa13.43□□□□□ -0.26
TNC-211ENST00000537320 MAP3K5Q99683 1374 aa13.42□□□□□ -0.26
TNC-211ENST00000537320 ADGBQ8N7X0 1667 aa13.42□□□□□ -0.26
TNC-211ENST00000537320 CDK5RAP3Q96JB5 506 aa13.42□□□□□ -0.26
TNC-211ENST00000537320 EDC4Q6P2E9 1401 aaKnown RBP13.42□□□□□ -0.26
TNC-211ENST00000537320 SMC2O95347 1197 aa13.42□□□□□ -0.26
TNC-211ENST00000537320 GRM8O00222 908 aa13.42□□□□□ -0.26
TNC-211ENST00000537320 IL13P35225 146 aa13.42□□□□□ -0.26
TNC-211ENST00000537320 YEATS2Q9ULM3 1422 aa13.41□□□□□ -0.26
TNC-211ENST00000537320 ALDH1L1O75891 902 aa13.41□□□□□ -0.26
TNC-211ENST00000537320 SDSP20132 328 aa13.41□□□□□ -0.26
TNC-211ENST00000537320 BRPF3Q9ULD4 1205 aa13.41□□□□□ -0.26
TNC-211ENST00000537320 ATP8B2P98198 1209 aa13.41□□□□□ -0.26
TNC-211ENST00000537320 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.41□□□□□ -0.26
TNC-211ENST00000537320 PIBF1Q8WXW3 757 aa13.41□□□□□ -0.26
TNC-211ENST00000537320 TBC1D32Q96NH3 1257 aa13.41□□□□□ -0.26
TNC-211ENST00000537320 ORAI2Q96SN7 254 aa13.41□□□□□ -0.26
TNC-211ENST00000537320 LARP6Q9BRS8 491 aaKnown RBP13.41□□□□□ -0.26
TNC-211ENST00000537320 GPS2Q13227 327 aa13.41□□□□□ -0.26
TNC-211ENST00000537320 SOGA3Q5TF21 947 aa13.41□□□□□ -0.26
TNC-211ENST00000537320 PTPRTO14522 1441 aa13.41□□□□□ -0.26
TNC-211ENST00000537320 MYO5CQ9NQX4 1742 aa13.41□□□□□ -0.26
TNC-211ENST00000537320 SH2B1Q9NRF2 756 aaPredicted RBP13.41□□□□□ -0.26
TNC-211ENST00000537320 IL2RBP14784 551 aa13.4□□□□□ -0.26
TNC-211ENST00000537320 PDE1AP54750 535 aa13.4□□□□□ -0.26
TNC-211ENST00000537320 LIMCH1Q9UPQ0 1083 aa13.4□□□□□ -0.26
TNC-211ENST00000537320 ACSBG1Q96GR2 724 aa13.4□□□□□ -0.26
TNC-211ENST00000537320 GRPEL1Q9HAV7 217 aa13.4□□□□□ -0.26
TNC-211ENST00000537320 NOL7Q9UMY1 257 aaKnown RBP13.4□□□□□ -0.26
TNC-211ENST00000537320 ZNF213O14771 459 aa13.39□□□□□ -0.27
TNC-211ENST00000537320 USP5P45974 858 aa13.39□□□□□ -0.27
TNC-211ENST00000537320 C16orf71Q8IYS4 520 aaPredicted RBP13.39□□□□□ -0.27
TNC-211ENST00000537320 TMEM2Q9UHN6 1383 aa13.39□□□□□ -0.27
TNC-211ENST00000537320 TOM1O60784 492 aa13.39□□□□□ -0.27
TNC-211ENST00000537320 CCDC173Q0VFZ6 552 aa13.39□□□□□ -0.27
TNC-211ENST00000537320 DHX8Q14562 1220 aaKnown RBP13.39□□□□□ -0.27
TNC-211ENST00000537320 DZIP1Q86YF9 867 aaKnown RBP13.39□□□□□ -0.27
TNC-211ENST00000537320 HMGB1P09429 215 aaKnown RBP13.39□□□□□ -0.27
TNC-211ENST00000537320 LMBR1LQ6UX01 489 aa13.39□□□□□ -0.27
TNC-211ENST00000537320 SPC24Q8NBT2 197 aa13.39□□□□□ -0.27
TNC-211ENST00000537320 ZBTB40Q9NUA8 1239 aa13.39□□□□□ -0.27
TNC-211ENST00000537320 FAM13BQ9NYF5 915 aa13.39□□□□□ -0.27
TNC-211ENST00000537320 UBAP1LF5GYI3 381 aa13.38□□□□□ -0.27
TNC-211ENST00000537320 PRKCSHP14314 528 aaPredicted RBP13.38□□□□□ -0.27
TNC-211ENST00000537320 LINS1Q8NG48 757 aa13.38□□□□□ -0.27
TNC-211ENST00000537320 WASF1Q92558 559 aa13.38□□□□□ -0.27
TNC-211ENST00000537320 CDC5LQ99459 802 aaKnown RBP13.38□□□□□ -0.27
TNC-211ENST00000537320 NUP62CLQ9H1M0 184 aa13.38□□□□□ -0.27
TNC-211ENST00000537320 SSFA2P28290 1259 aa13.38□□□□□ -0.27
TNC-211ENST00000537320 SAMD9LQ8IVG5 1584 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms