RNA–Protein interactions for RNA: ENST00000536876.5

LTBR-206, Transcript of lymphotoxin beta receptor, humanhuman

TSL 5

Gene LTBR, Length 842 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-206ENST00000536876 SIPA1L3O60292 1781 aaPredicted RBP24.03■■□□□ 1.44
LTBR-206ENST00000536876 EIF4G2P78344 907 aaKnown RBP eCLIP24.02■■□□□ 1.44
LTBR-206ENST00000536876 LGR6Q9HBX8 967 aa24.02■■□□□ 1.44
LTBR-206ENST00000536876 RNF181Q9P0P0 153 aa24.02■■□□□ 1.44
LTBR-206ENST00000536876 PRELPP51888 382 aa24.01■■□□□ 1.43
LTBR-206ENST00000536876 USPL1Q5W0Q7 1092 aa24.01■■□□□ 1.43
LTBR-206ENST00000536876 SLC52A2Q9HAB3 445 aa24.01■■□□□ 1.43
LTBR-206ENST00000536876 COL15A1P39059 1388 aa24.01■■□□□ 1.43
LTBR-206ENST00000536876 AKAP4Q5JQC9 854 aa24■■□□□ 1.43
LTBR-206ENST00000536876 CARMIL3Q8ND23 1372 aa24■■□□□ 1.43
LTBR-206ENST00000536876 CYP19A1P11511 503 aaPredicted RBP23.99■■□□□ 1.43
LTBR-206ENST00000536876 RASSF7Q02833 373 aa23.99■■□□□ 1.43
LTBR-206ENST00000536876 SLC39A6Q13433 755 aa23.99■■□□□ 1.43
LTBR-206ENST00000536876 BCL2L12Q9HB09 334 aa23.99■■□□□ 1.43
LTBR-206ENST00000536876 NFIXQ14938 502 aa23.98■■□□□ 1.43
LTBR-206ENST00000536876 AMER1Q5JTC6 1135 aaPredicted RBP23.98■■□□□ 1.43
LTBR-206ENST00000536876 ZBTB1Q9Y2K1 713 aa23.98■■□□□ 1.43
LTBR-206ENST00000536876 RNMTO43148 476 aaKnown RBP23.97■■□□□ 1.43
LTBR-206ENST00000536876 DICER1Q9UPY3 1922 aaKnown RBP23.96■■□□□ 1.43
LTBR-206ENST00000536876 COL3A1P02461 1466 aaPredicted RBP23.96■■□□□ 1.43
LTBR-206ENST00000536876 KDM2BQ8NHM5 1336 aa23.96■■□□□ 1.43
LTBR-206ENST00000536876 FSTL1Q12841 308 aa23.96■■□□□ 1.43
LTBR-206ENST00000536876 KLRG1Q96E93 195 aa23.96■■□□□ 1.43
LTBR-206ENST00000536876 FER1L6Q2WGJ9 1857 aa23.96■■□□□ 1.43
LTBR-206ENST00000536876 JMYQ8N9B5 988 aa23.95■■□□□ 1.42
LTBR-206ENST00000536876 RRAGCQ9HB90 399 aa23.95■■□□□ 1.42
LTBR-206ENST00000536876 NARFQ9UHQ1 456 aa23.95■■□□□ 1.42
LTBR-206ENST00000536876 CACNA1SQ13698 1873 aa23.94■■□□□ 1.42
LTBR-206ENST00000536876 BCORQ6W2J9 1755 aa23.93■■□□□ 1.42
LTBR-206ENST00000536876 ZPR1O75312 459 aa23.93■■□□□ 1.42
LTBR-206ENST00000536876 HMOX1P09601 288 aa23.93■■□□□ 1.42
LTBR-206ENST00000536876 C16orf71Q8IYS4 520 aaPredicted RBP23.92■■□□□ 1.42
LTBR-206ENST00000536876 ARFGEF2Q9Y6D5 1785 aa23.92■■□□□ 1.42
LTBR-206ENST00000536876 ZC3H4Q9UPT8 1303 aaKnown RBP23.91■■□□□ 1.42
LTBR-206ENST00000536876 MTHFSDQ2M296 383 aaKnown RBP23.91■■□□□ 1.42
LTBR-206ENST00000536876 PCGF6Q9BYE7 350 aa23.91■■□□□ 1.42
LTBR-206ENST00000536876 KNSTRNQ9Y448 316 aa23.91■■□□□ 1.42
LTBR-206ENST00000536876 NFKBIEO00221 500 aa23.88■■□□□ 1.41
LTBR-206ENST00000536876 SERPINB2P05120 415 aa23.88■■□□□ 1.41
LTBR-206ENST00000536876 KIF7Q2M1P5 1343 aa23.87■■□□□ 1.41
LTBR-206ENST00000536876 VSIG10Q8N0Z9 540 aa23.87■■□□□ 1.41
LTBR-206ENST00000536876 LMNB1P20700 586 aa23.86■■□□□ 1.41
LTBR-206ENST00000536876 COL13A1Q5TAT6 717 aaPredicted RBP23.86■■□□□ 1.41
LTBR-206ENST00000536876 EIF5P55010 431 aaKnown RBP23.85■■□□□ 1.41
LTBR-206ENST00000536876 SMC1BQ8NDV3 1235 aa23.85■■□□□ 1.41
LTBR-206ENST00000536876 SLX4Q8IY92 1834 aa23.84■■□□□ 1.41
LTBR-206ENST00000536876 GLTPD2A6NH11 291 aa23.84■■□□□ 1.41
LTBR-206ENST00000536876 C2CD5Q86YS7 1000 aa23.84■■□□□ 1.41
LTBR-206ENST00000536876 TTLL6Q8N841 843 aa23.84■■□□□ 1.41
LTBR-206ENST00000536876 CANXP27824 592 aaKnown RBP23.83■■□□□ 1.41
LTBR-206ENST00000536876 POTECB2RU33 542 aa23.82■■□□□ 1.4
LTBR-206ENST00000536876 PER1O15534 1290 aaPredicted RBP23.82■■□□□ 1.4
LTBR-206ENST00000536876 HEG1Q9ULI3 1381 aa23.81■■□□□ 1.4
LTBR-206ENST00000536876 TBC1D9BQ66K14 1250 aa23.81■■□□□ 1.4
LTBR-206ENST00000536876 DIAPH1O60610 1272 aaKnown RBP23.8■■□□□ 1.4
LTBR-206ENST00000536876 BICDL1Q6ZP65 573 aa23.8■■□□□ 1.4
LTBR-206ENST00000536876 ZNF496Q96IT1 587 aaPredicted RBP23.8■■□□□ 1.4
LTBR-206ENST00000536876 VEGFAP15692 232 aaPredicted RBP23.78■■□□□ 1.4
LTBR-206ENST00000536876 CCDC24Q8N4L8 307 aa23.78■■□□□ 1.4
LTBR-206ENST00000536876 IL17REQ8NFR9 667 aa23.78■■□□□ 1.4
LTBR-206ENST00000536876 H0YIN7 160 aa23.77■■□□□ 1.4
LTBR-206ENST00000536876 PRR5LQ6MZQ0 368 aa23.77■■□□□ 1.4
LTBR-206ENST00000536876 CC2D1BQ5T0F9 858 aaKnown RBP23.76■■□□□ 1.39
LTBR-206ENST00000536876 CEMIPQ8WUJ3 1361 aa23.76■■□□□ 1.39
LTBR-206ENST00000536876 ZNF790Q6PG37 636 aa23.75■■□□□ 1.39
LTBR-206ENST00000536876 TTC5Q8N0Z6 440 aa23.75■■□□□ 1.39
LTBR-206ENST00000536876 STARD3NLO95772 234 aa23.74■■□□□ 1.39
LTBR-206ENST00000536876 TBC1D2BQ9UPU7 963 aa23.74■■□□□ 1.39
LTBR-206ENST00000536876 A0A087WZG4 1122 aa23.73■■□□□ 1.39
LTBR-206ENST00000536876 C21orf2O43822 256 aa23.73■■□□□ 1.39
LTBR-206ENST00000536876 BRIP1Q9BX63 1249 aa23.73■■□□□ 1.39
LTBR-206ENST00000536876 CAMTA2O94983 1202 aa23.72■■□□□ 1.39
LTBR-206ENST00000536876 ZNF219Q9P2Y4 722 aaPredicted RBP23.72■■□□□ 1.39
LTBR-206ENST00000536876 NPC1L1Q9UHC9 1359 aa23.72■■□□□ 1.39
LTBR-206ENST00000536876 LTBP3Q9NS15 1303 aa23.71■■□□□ 1.39
LTBR-206ENST00000536876 KCNQ3O43525 872 aa23.71■■□□□ 1.39
LTBR-206ENST00000536876 A1BGP04217 495 aa23.71■■□□□ 1.39
LTBR-206ENST00000536876 IL6STP40189 918 aaPredicted RBP23.71■■□□□ 1.39
LTBR-206ENST00000536876 ZNF622Q969S3 477 aaKnown RBP eCLIP23.71■■□□□ 1.39
LTBR-206ENST00000536876 GNAT3A8MTJ3 354 aa23.7■■□□□ 1.38
LTBR-206ENST00000536876 HSPA1AP0DMV8 641 aaKnown RBP23.7■■□□□ 1.38
LTBR-206ENST00000536876 HSPA1BP0DMV9 641 aaKnown RBP23.7■■□□□ 1.38
LTBR-206ENST00000536876 SCN4AP35499 1836 aa23.7■■□□□ 1.38
LTBR-206ENST00000536876 LAMB4A4D0S4 1761 aa23.7■■□□□ 1.38
LTBR-206ENST00000536876 ADAMTSL1Q8N6G6 1762 aa23.7■■□□□ 1.38
LTBR-206ENST00000536876 POTEIP0CG38 1075 aa23.69■■□□□ 1.38
LTBR-206ENST00000536876 POTEJP0CG39 1038 aa23.69■■□□□ 1.38
LTBR-206ENST00000536876 PDE6BP35913 854 aa23.69■■□□□ 1.38
LTBR-206ENST00000536876 TEFQ10587 303 aa23.69■■□□□ 1.38
LTBR-206ENST00000536876 ZNF330Q9Y3S2 320 aaPredicted RBP23.69■■□□□ 1.38
LTBR-206ENST00000536876 ERFEQ4G0M1 354 aa23.68■■□□□ 1.38
LTBR-206ENST00000536876 GAS2L2Q8NHY3 880 aa23.68■■□□□ 1.38
LTBR-206ENST00000536876 PDZRN3Q9UPQ7 1066 aa23.68■■□□□ 1.38
LTBR-206ENST00000536876 U2SURPO15042 1029 aaKnown RBP23.67■■□□□ 1.38
LTBR-206ENST00000536876 CAPN15O75808 1086 aa23.67■■□□□ 1.38
LTBR-206ENST00000536876 TNS4Q8IZW8 715 aa23.67■■□□□ 1.38
LTBR-206ENST00000536876 FMNL2Q96PY5 1086 aa23.67■■□□□ 1.38
LTBR-206ENST00000536876 PRAMEF22A3QJZ6 481 aa23.66■■□□□ 1.38
LTBR-206ENST00000536876 SRGNP10124 158 aa23.66■■□□□ 1.38
LTBR-206ENST00000536876 PIP4K2AP48426 406 aaPredicted RBP23.66■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms