RNA–Protein interactions for RNA: ENST00000536843.5

CHFR-213, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 2,424 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-213ENST00000536843 SDSP20132 328 aa18.79■□□□□ 0.6
CHFR-213ENST00000536843 CCDC183Q5T5S1 534 aa18.79■□□□□ 0.6
CHFR-213ENST00000536843 MCM10Q7L590 875 aa18.79■□□□□ 0.6
CHFR-213ENST00000536843 GADD45BO75293 160 aaPredicted RBP18.78■□□□□ 0.6
CHFR-213ENST00000536843 TMEM87AQ8NBN3 555 aa18.78■□□□□ 0.6
CHFR-213ENST00000536843 KIF24Q5T7B8 1368 aa18.78■□□□□ 0.6
CHFR-213ENST00000536843 PEAK1Q9H792 1746 aa18.78■□□□□ 0.6
CHFR-213ENST00000536843 NCBP1Q09161 790 aaKnown RBP18.78■□□□□ 0.6
CHFR-213ENST00000536843 CTNNA3Q9UI47 895 aa18.78■□□□□ 0.6
CHFR-213ENST00000536843 KRT24Q2M2I5 525 aa18.77■□□□□ 0.6
CHFR-213ENST00000536843 API5Q9BZZ5 524 aaKnown RBP18.77■□□□□ 0.6
CHFR-213ENST00000536843 KCNF1Q9H3M0 494 aa18.77■□□□□ 0.6
CHFR-213ENST00000536843 MAP3K19Q56UN5 1328 aa18.77■□□□□ 0.59
CHFR-213ENST00000536843 NGDNQ8NEJ9 315 aaKnown RBP18.76■□□□□ 0.59
CHFR-213ENST00000536843 PYCARDQ9ULZ3 195 aa18.76■□□□□ 0.59
CHFR-213ENST00000536843 ERC2O15083 957 aa18.76■□□□□ 0.59
CHFR-213ENST00000536843 SLFN14P0C7P3 912 aa18.76■□□□□ 0.59
CHFR-213ENST00000536843 USP48Q86UV5 1035 aa18.76■□□□□ 0.59
CHFR-213ENST00000536843 TTC21AQ8NDW8 1320 aa18.75■□□□□ 0.59
CHFR-213ENST00000536843 CHL1O00533 1208 aa18.75■□□□□ 0.59
CHFR-213ENST00000536843 HCLS1P14317 486 aaPredicted RBP18.75■□□□□ 0.59
CHFR-213ENST00000536843 DDX41Q9UJV9 622 aaKnown RBP18.75■□□□□ 0.59
CHFR-213ENST00000536843 MX1P20591 662 aa18.75■□□□□ 0.59
CHFR-213ENST00000536843 NEK4P51957 841 aa18.75■□□□□ 0.59
CHFR-213ENST00000536843 C16orf71Q8IYS4 520 aaPredicted RBP18.75■□□□□ 0.59
CHFR-213ENST00000536843 NALCNQ8IZF0 1738 aa18.74■□□□□ 0.59
CHFR-213ENST00000536843 SLC20A2Q08357 652 aa18.73■□□□□ 0.59
CHFR-213ENST00000536843 MORC2Q9Y6X9 1032 aaPredicted RBP18.73■□□□□ 0.59
CHFR-213ENST00000536843 CCDC66A2RUB6 948 aa18.73■□□□□ 0.59
CHFR-213ENST00000536843 PDIA4P13667 645 aaKnown RBP18.73■□□□□ 0.59
CHFR-213ENST00000536843 RTL1A6NKG5 1358 aa18.72■□□□□ 0.59
CHFR-213ENST00000536843 WDR33Q9C0J8 1336 aaKnown RBP18.72■□□□□ 0.59
CHFR-213ENST00000536843 FOXO3O43524 673 aa18.72■□□□□ 0.59
CHFR-213ENST00000536843 SMARCA5O60264 1052 aaPredicted RBP18.72■□□□□ 0.59
CHFR-213ENST00000536843 CDK11BP21127 795 aaKnown RBP18.72■□□□□ 0.59
CHFR-213ENST00000536843 IRX5P78411 483 aaPredicted RBP18.72■□□□□ 0.59
CHFR-213ENST00000536843 OTUD7AQ8TE49 926 aaPredicted RBP18.72■□□□□ 0.59
CHFR-213ENST00000536843 FUCA2Q9BTY2 467 aa18.72■□□□□ 0.59
CHFR-213ENST00000536843 GDPD2Q9HCC8 539 aa18.72■□□□□ 0.59
CHFR-213ENST00000536843 GOLGA6L6A8MZA4 724 aa18.71■□□□□ 0.59
CHFR-213ENST00000536843 ARHGEF10O15013 1369 aa18.71■□□□□ 0.59
CHFR-213ENST00000536843 RGPD1P0DJD0 1748 aa18.71■□□□□ 0.59
CHFR-213ENST00000536843 ZBTB22O15209 634 aa18.71■□□□□ 0.59
CHFR-213ENST00000536843 MTHFSDQ2M296 383 aaKnown RBP18.71■□□□□ 0.59
CHFR-213ENST00000536843 SBNO1A3KN83 1393 aa18.7■□□□□ 0.58
CHFR-213ENST00000536843 RPAP1Q9BWH6 1393 aaPredicted RBP18.7■□□□□ 0.58
CHFR-213ENST00000536843 SMTNL1A8MU46 457 aa18.7■□□□□ 0.58
CHFR-213ENST00000536843 AMPHP49418 695 aa18.7■□□□□ 0.58
CHFR-213ENST00000536843 MIS18AQ9NYP9 233 aa18.7■□□□□ 0.58
CHFR-213ENST00000536843 CRB1P82279 1406 aa18.7■□□□□ 0.58
CHFR-213ENST00000536843 ATP10DQ9P241 1426 aa18.7■□□□□ 0.58
CHFR-213ENST00000536843 KCNA6P17658 529 aa18.7■□□□□ 0.58
CHFR-213ENST00000536843 TERF2Q15554 542 aa18.7■□□□□ 0.58
CHFR-213ENST00000536843 ANKRD44Q8N8A2 993 aa18.7■□□□□ 0.58
CHFR-213ENST00000536843 FLT4P35916 1363 aa18.69■□□□□ 0.58
CHFR-213ENST00000536843 AP5Z1O43299 807 aa18.69■□□□□ 0.58
CHFR-213ENST00000536843 KIAA0232Q92628 1395 aa18.69■□□□□ 0.58
CHFR-213ENST00000536843 VGLL3A8MV65 326 aa18.69■□□□□ 0.58
CHFR-213ENST00000536843 ANAPC15P60006 121 aa18.69■□□□□ 0.58
CHFR-213ENST00000536843 EYA1Q99502 592 aa18.69■□□□□ 0.58
CHFR-213ENST00000536843 RGS12O14924 1447 aa18.68■□□□□ 0.58
CHFR-213ENST00000536843 UBE2HP62256 183 aa18.68■□□□□ 0.58
CHFR-213ENST00000536843 NUTM2GQ5VZR2 741 aa18.68■□□□□ 0.58
CHFR-213ENST00000536843 IL17RAQ96F46 866 aa18.68■□□□□ 0.58
CHFR-213ENST00000536843 RGPD8O14715 1765 aaPredicted RBP18.68■□□□□ 0.58
CHFR-213ENST00000536843 XRN1Q8IZH2 1706 aaKnown RBP18.68■□□□□ 0.58
CHFR-213ENST00000536843 KCNJ4P48050 445 aa18.68■□□□□ 0.58
CHFR-213ENST00000536843 NLRP6P59044 892 aa18.68■□□□□ 0.58
CHFR-213ENST00000536843 KIF18AQ8NI77 898 aa18.68■□□□□ 0.58
CHFR-213ENST00000536843 NPHP4O75161 1426 aaPredicted RBP18.67■□□□□ 0.58
CHFR-213ENST00000536843 HAP1P54257 671 aaPredicted RBP18.67■□□□□ 0.58
CHFR-213ENST00000536843 FAM193AP78312 1265 aa18.66■□□□□ 0.58
CHFR-213ENST00000536843 RPAP2Q8IXW5 612 aaPredicted RBP18.66■□□□□ 0.58
CHFR-213ENST00000536843 TIGD1Q96MW7 591 aa18.66■□□□□ 0.58
CHFR-213ENST00000536843 RTF1Q92541 710 aaKnown RBP18.66■□□□□ 0.58
CHFR-213ENST00000536843 KDM4FA0A1W2PPD8 638 aa18.65■□□□□ 0.58
CHFR-213ENST00000536843 SRCIN1Q9C0H9 1055 aa18.65■□□□□ 0.58
CHFR-213ENST00000536843 OSBPL3Q9H4L5 887 aa18.65■□□□□ 0.58
CHFR-213ENST00000536843 MCCP23508 829 aa18.65■□□□□ 0.58
CHFR-213ENST00000536843 KRT222Q8N1A0 295 aa18.65■□□□□ 0.58
CHFR-213ENST00000536843 DNAJC2Q99543 621 aaKnown RBP18.65■□□□□ 0.58
CHFR-213ENST00000536843 PAXBP1Q9Y5B6 917 aa18.65■□□□□ 0.58
CHFR-213ENST00000536843 FOXD4L6Q3SYB3 417 aaPredicted RBP18.64■□□□□ 0.58
CHFR-213ENST00000536843 FOXD4L3Q6VB84 417 aaPredicted RBP18.64■□□□□ 0.58
CHFR-213ENST00000536843 IGSF1Q8N6C5 1336 aa18.64■□□□□ 0.58
CHFR-213ENST00000536843 PLCB2Q00722 1185 aa18.64■□□□□ 0.57
CHFR-213ENST00000536843 FAM53CQ9NYF3 392 aa18.64■□□□□ 0.57
CHFR-213ENST00000536843 TSPYL4Q9UJ04 414 aa18.64■□□□□ 0.57
CHFR-213ENST00000536843 KDRP35968 1356 aa18.64■□□□□ 0.57
CHFR-213ENST00000536843 PIK3C2AO00443 1686 aa18.64■□□□□ 0.57
CHFR-213ENST00000536843 SLC4A2P04920 1241 aa18.63■□□□□ 0.57
CHFR-213ENST00000536843 CREBRFQ8IUR6 639 aa18.63■□□□□ 0.57
CHFR-213ENST00000536843 ANKARQ7Z5J8 1434 aa18.63■□□□□ 0.57
CHFR-213ENST00000536843 TULP2O00295 520 aa18.63■□□□□ 0.57
CHFR-213ENST00000536843 CEP85Q6P2H3 762 aa18.63■□□□□ 0.57
CHFR-213ENST00000536843 SPC24Q8NBT2 197 aa18.63■□□□□ 0.57
CHFR-213ENST00000536843 CNPY2Q9Y2B0 182 aa18.63■□□□□ 0.57
CHFR-213ENST00000536843 PTPRCP08575 1304 aa18.62■□□□□ 0.57
CHFR-213ENST00000536843 CHD2O14647 1828 aaKnown RBP18.62■□□□□ 0.57
CHFR-213ENST00000536843 CALCOCO1Q9P1Z2 691 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms