RNA–Protein interactions for RNA: ENST00000536702.1

CUL3-213, Transcript of cullin 3, humanhuman

TSL 3

Gene CUL3, Length 404 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-213ENST00000536702 ARFGEF1Q9Y6D6 1849 aa20.75■□□□□ 0.91
CUL3-213ENST00000536702 SOS1Q07889 1333 aaPredicted RBP20.75■□□□□ 0.91
CUL3-213ENST00000536702 POLRMTO00411 1230 aaKnown RBP20.74■□□□□ 0.91
CUL3-213ENST00000536702 CC2D1BQ5T0F9 858 aaKnown RBP20.74■□□□□ 0.91
CUL3-213ENST00000536702 ZBTB22O15209 634 aa20.73■□□□□ 0.91
CUL3-213ENST00000536702 CHRNA5P30532 468 aa20.73■□□□□ 0.91
CUL3-213ENST00000536702 MTHFSDQ2M296 383 aaKnown RBP20.73■□□□□ 0.91
CUL3-213ENST00000536702 USPL1Q5W0Q7 1092 aa20.73■□□□□ 0.91
CUL3-213ENST00000536702 PIM2Q9P1W9 311 aa20.73■□□□□ 0.91
CUL3-213ENST00000536702 ZPR1O75312 459 aa20.72■□□□□ 0.91
CUL3-213ENST00000536702 MYCNP04198 464 aaPredicted RBP20.72■□□□□ 0.91
CUL3-213ENST00000536702 CYP19A1P11511 503 aaPredicted RBP20.72■□□□□ 0.91
CUL3-213ENST00000536702 C9orf131Q5VYM1 1079 aa20.72■□□□□ 0.91
CUL3-213ENST00000536702 NMRK2Q9NPI5 230 aa20.72■□□□□ 0.91
CUL3-213ENST00000536702 COL15A1P39059 1388 aa20.72■□□□□ 0.91
CUL3-213ENST00000536702 DIAPH1O60610 1272 aaKnown RBP20.71■□□□□ 0.91
CUL3-213ENST00000536702 DALRD3Q5D0E6 543 aaKnown RBP20.71■□□□□ 0.91
CUL3-213ENST00000536702 ZBTB1Q9Y2K1 713 aa20.71■□□□□ 0.91
CUL3-213ENST00000536702 TM4SF1P30408 202 aa20.7■□□□□ 0.9
CUL3-213ENST00000536702 CNGB1Q14028 1251 aaPredicted RBP20.7■□□□□ 0.9
CUL3-213ENST00000536702 COL3A1P02461 1466 aaPredicted RBP20.69■□□□□ 0.9
CUL3-213ENST00000536702 PER1O15534 1290 aaPredicted RBP20.69■□□□□ 0.9
CUL3-213ENST00000536702 UBR2Q8IWV8 1755 aa20.69■□□□□ 0.9
CUL3-213ENST00000536702 AFDNP55196 1824 aaKnown RBP20.67■□□□□ 0.9
CUL3-213ENST00000536702 TOMM70O94826 608 aa20.67■□□□□ 0.9
CUL3-213ENST00000536702 NFIXQ14938 502 aa20.67■□□□□ 0.9
CUL3-213ENST00000536702 RNF181Q9P0P0 153 aa20.67■□□□□ 0.9
CUL3-213ENST00000536702 NARFQ9UHQ1 456 aa20.67■□□□□ 0.9
CUL3-213ENST00000536702 SPINK5Q9NQ38 1064 aaPredicted RBP20.66■□□□□ 0.9
CUL3-213ENST00000536702 NRXN2Q9P2S2 1712 aa20.66■□□□□ 0.9
CUL3-213ENST00000536702 BCL2L12Q9HB09 334 aa20.65■□□□□ 0.9
CUL3-213ENST00000536702 U2SURPO15042 1029 aaKnown RBP20.64■□□□□ 0.89
CUL3-213ENST00000536702 CANXP27824 592 aaKnown RBP20.64■□□□□ 0.89
CUL3-213ENST00000536702 RASSF7Q02833 373 aa20.64■□□□□ 0.89
CUL3-213ENST00000536702 IFFO2Q5TF58 517 aa20.64■□□□□ 0.89
CUL3-213ENST00000536702 VSIG10Q8N0Z9 540 aa20.64■□□□□ 0.89
CUL3-213ENST00000536702 CARMIL3Q8ND23 1372 aa20.63■□□□□ 0.89
CUL3-213ENST00000536702 APLP1P51693 650 aa20.63■□□□□ 0.89
CUL3-213ENST00000536702 TTC5Q8N0Z6 440 aa20.63■□□□□ 0.89
CUL3-213ENST00000536702 SERPINB2P05120 415 aa20.62■□□□□ 0.89
CUL3-213ENST00000536702 SAMD1Q6SPF0 538 aaPredicted RBP20.62■□□□□ 0.89
CUL3-213ENST00000536702 DLEC1Q9Y238 1755 aa20.62■□□□□ 0.89
CUL3-213ENST00000536702 NPC1L1Q9UHC9 1359 aa20.61■□□□□ 0.89
CUL3-213ENST00000536702 SBF1O95248 1867 aa20.61■□□□□ 0.89
CUL3-213ENST00000536702 C16orf71Q8IYS4 520 aaPredicted RBP20.61■□□□□ 0.89
CUL3-213ENST00000536702 CAPN15O75808 1086 aa20.6■□□□□ 0.89
CUL3-213ENST00000536702 TEFQ10587 303 aa20.6■□□□□ 0.89
CUL3-213ENST00000536702 BICDL1Q6ZP65 573 aa20.6■□□□□ 0.89
CUL3-213ENST00000536702 GAS2L2Q8NHY3 880 aa20.6■□□□□ 0.89
CUL3-213ENST00000536702 RBM46Q8TBY0 533 aaKnown RBP20.6■□□□□ 0.89
CUL3-213ENST00000536702 ZNF496Q96IT1 587 aaPredicted RBP20.6■□□□□ 0.89
CUL3-213ENST00000536702 SCN7AQ01118 1682 aa20.6■□□□□ 0.89
CUL3-213ENST00000536702 HEG1Q9ULI3 1381 aa20.59■□□□□ 0.89
CUL3-213ENST00000536702 SIPA1L3O60292 1781 aaPredicted RBP20.59■□□□□ 0.89
CUL3-213ENST00000536702 KDM2BQ8NHM5 1336 aa20.59■□□□□ 0.89
CUL3-213ENST00000536702 GNAT3A8MTJ3 354 aa20.59■□□□□ 0.89
CUL3-213ENST00000536702 STARD3NLO95772 234 aa20.59■□□□□ 0.89
CUL3-213ENST00000536702 EIF5P55010 431 aaKnown RBP20.59■□□□□ 0.89
CUL3-213ENST00000536702 IL17REQ8NFR9 667 aa20.59■□□□□ 0.89
CUL3-213ENST00000536702 ZNF330Q9Y3S2 320 aaPredicted RBP20.59■□□□□ 0.89
CUL3-213ENST00000536702 TNRC6CQ9HCJ0 1690 aaKnown RBP20.58■□□□□ 0.89
CUL3-213ENST00000536702 C2CD5Q86YS7 1000 aa20.58■□□□□ 0.89
CUL3-213ENST00000536702 WDR90Q96KV7 1748 aa20.58■□□□□ 0.88
CUL3-213ENST00000536702 ZNF790Q6PG37 636 aa20.57■□□□□ 0.88
CUL3-213ENST00000536702 RRAGCQ9HB90 399 aa20.57■□□□□ 0.88
CUL3-213ENST00000536702 TBC1D9BQ66K14 1250 aa20.56■□□□□ 0.88
CUL3-213ENST00000536702 TTLL6Q8N841 843 aa20.56■□□□□ 0.88
CUL3-213ENST00000536702 A0A087WZG4 1122 aa20.55■□□□□ 0.88
CUL3-213ENST00000536702 PRELPP51888 382 aa20.55■□□□□ 0.88
CUL3-213ENST00000536702 HTRA3P83110 453 aa20.55■□□□□ 0.88
CUL3-213ENST00000536702 DNAJC5GQ8N7S2 189 aa20.55■□□□□ 0.88
CUL3-213ENST00000536702 ANKRD31Q8N7Z5 1873 aa20.55■□□□□ 0.88
CUL3-213ENST00000536702 TIAM2Q8IVF5 1701 aa20.54■□□□□ 0.88
CUL3-213ENST00000536702 PRKAR2BP31323 418 aa20.54■□□□□ 0.88
CUL3-213ENST00000536702 CCDC24Q8N4L8 307 aa20.54■□□□□ 0.88
CUL3-213ENST00000536702 TBC1D2BQ9UPU7 963 aa20.54■□□□□ 0.88
CUL3-213ENST00000536702 CEMIPQ8WUJ3 1361 aa20.54■□□□□ 0.88
CUL3-213ENST00000536702 COL11A2P13942 1736 aaPredicted RBP20.53■□□□□ 0.88
CUL3-213ENST00000536702 H0YIN7 160 aa20.53■□□□□ 0.88
CUL3-213ENST00000536702 LMNB1P20700 586 aa20.53■□□□□ 0.88
CUL3-213ENST00000536702 FSTL1Q12841 308 aa20.53■□□□□ 0.88
CUL3-213ENST00000536702 PHACTR3Q96KR7 559 aa20.53■□□□□ 0.88
CUL3-213ENST00000536702 FMNL2Q96PY5 1086 aa20.53■□□□□ 0.88
CUL3-213ENST00000536702 ZC3H4Q9UPT8 1303 aaKnown RBP20.53■□□□□ 0.88
CUL3-213ENST00000536702 NFKBIEO00221 500 aa20.52■□□□□ 0.88
CUL3-213ENST00000536702 KCNQ3O43525 872 aa20.52■□□□□ 0.88
CUL3-213ENST00000536702 A1BGP04217 495 aa20.52■□□□□ 0.88
CUL3-213ENST00000536702 TEX13AQ9BXU3 409 aaPredicted RBP20.52■□□□□ 0.88
CUL3-213ENST00000536702 RSPH6AQ9H0K4 717 aa20.52■□□□□ 0.88
CUL3-213ENST00000536702 IL6STP40189 918 aaPredicted RBP20.51■□□□□ 0.87
CUL3-213ENST00000536702 PRR5LQ6MZQ0 368 aa20.51■□□□□ 0.87
CUL3-213ENST00000536702 BTBD11A6QL63 1104 aa20.5■□□□□ 0.87
CUL3-213ENST00000536702 ZNF622Q969S3 477 aaKnown RBP eCLIP20.5■□□□□ 0.87
CUL3-213ENST00000536702 CFAP53Q96M91 514 aa20.5■□□□□ 0.87
CUL3-213ENST00000536702 ZNF219Q9P2Y4 722 aaPredicted RBP20.5■□□□□ 0.87
CUL3-213ENST00000536702 BCORQ6W2J9 1755 aa20.49■□□□□ 0.87
CUL3-213ENST00000536702 CAMTA2O94983 1202 aa20.49■□□□□ 0.87
CUL3-213ENST00000536702 PIP4K2AP48426 406 aaPredicted RBP20.49■□□□□ 0.87
CUL3-213ENST00000536702 CCDC88AQ3V6T2 1871 aa20.48■□□□□ 0.87
CUL3-213ENST00000536702 BRIP1Q9BX63 1249 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms