RNA–Protein interactions for RNA: ENST00000536513.5

ABCA4-207, Transcript of ATP binding cassette subfamily A member 4, humanhuman

TSL 1 (best) BASIC

Gene ABCA4, Length 3,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-207ENST00000536513 GNAI2P04899 355 aa10.14□□□□□ -0.79
ABCA4-207ENST00000536513 UBE3BQ7Z3V4 1068 aa10.14□□□□□ -0.79
ABCA4-207ENST00000536513 WWC3Q9ULE0 1092 aa10.14□□□□□ -0.79
ABCA4-207ENST00000536513 DNAAF4Q8WXU2 420 aa10.13□□□□□ -0.79
ABCA4-207ENST00000536513 ZBTB7BO15156 539 aaPredicted RBP10.13□□□□□ -0.79
ABCA4-207ENST00000536513 HMMRO75330 724 aa10.13□□□□□ -0.79
ABCA4-207ENST00000536513 ZBTB40Q9NUA8 1239 aa10.13□□□□□ -0.79
ABCA4-207ENST00000536513 DBF4Q9UBU7 674 aaPredicted RBP10.13□□□□□ -0.79
ABCA4-207ENST00000536513 ANKARQ7Z5J8 1434 aa10.13□□□□□ -0.79
ABCA4-207ENST00000536513 GOLGA6L3A6NEY3 463 aa10.12□□□□□ -0.79
ABCA4-207ENST00000536513 ARHGEF10O15013 1369 aa10.12□□□□□ -0.79
ABCA4-207ENST00000536513 PHF14O94880 888 aa10.12□□□□□ -0.79
ABCA4-207ENST00000536513 DDX58O95786 925 aaKnown RBP10.12□□□□□ -0.79
ABCA4-207ENST00000536513 ZNF853P0CG23 659 aa10.12□□□□□ -0.79
ABCA4-207ENST00000536513 NEUROD6Q96NK8 337 aa10.12□□□□□ -0.79
ABCA4-207ENST00000536513 FMNL2Q96PY5 1086 aa10.12□□□□□ -0.79
ABCA4-207ENST00000536513 USP31Q70CQ4 1352 aa10.12□□□□□ -0.79
ABCA4-207ENST00000536513 CHD1LQ86WJ1 897 aa10.12□□□□□ -0.79
ABCA4-207ENST00000536513 DNAJC10Q8IXB1 793 aa10.12□□□□□ -0.79
ABCA4-207ENST00000536513 SLC52A2Q9HAB3 445 aa10.12□□□□□ -0.79
ABCA4-207ENST00000536513 CT47B1P0C2W7 299 aaPredicted RBP10.11□□□□□ -0.79
ABCA4-207ENST00000536513 MST1RQ04912 1400 aa10.11□□□□□ -0.79
ABCA4-207ENST00000536513 PNMA6EA0A0J9YXQ4 647 aa10.11□□□□□ -0.79
ABCA4-207ENST00000536513 BACH2Q9BYV9 841 aa10.11□□□□□ -0.79
ABCA4-207ENST00000536513 CHMP4BQ9H444 224 aaKnown RBP10.11□□□□□ -0.79
ABCA4-207ENST00000536513 GIGYF1O75420 1035 aaPredicted RBP10.11□□□□□ -0.79
ABCA4-207ENST00000536513 PPP1R42Q7Z4L9 355 aa10.11□□□□□ -0.79
ABCA4-207ENST00000536513 A0A087WZG4 1122 aa10.1□□□□□ -0.79
ABCA4-207ENST00000536513 KCNQ2O43526 872 aa10.1□□□□□ -0.79
ABCA4-207ENST00000536513 NCLP19338 710 aaKnown RBP10.1□□□□□ -0.79
ABCA4-207ENST00000536513 FAM43AQ8N2R8 423 aa10.1□□□□□ -0.79
ABCA4-207ENST00000536513 DCAF5Q96JK2 942 aa10.1□□□□□ -0.79
ABCA4-207ENST00000536513 DTNBO60941 627 aa10.1□□□□□ -0.79
ABCA4-207ENST00000536513 TTLL7Q6ZT98 887 aa10.1□□□□□ -0.79
ABCA4-207ENST00000536513 SNRPA1P09661 255 aaKnown RBP10.1□□□□□ -0.79
ABCA4-207ENST00000536513 CCT4P50991 539 aaKnown RBP10.1□□□□□ -0.79
ABCA4-207ENST00000536513 ANKRD13DQ6ZTN6 518 aa10.1□□□□□ -0.79
ABCA4-207ENST00000536513 CCDC8Q9H0W5 538 aaPredicted RBP10.1□□□□□ -0.79
ABCA4-207ENST00000536513 NDUFB9Q9Y6M9 179 aa10.09□□□□□ -0.79
ABCA4-207ENST00000536513 COL3A1P02461 1466 aaPredicted RBP10.09□□□□□ -0.79
ABCA4-207ENST00000536513 WDR17Q8IZU2 1322 aa10.09□□□□□ -0.79
ABCA4-207ENST00000536513 HMGB1P09429 215 aaKnown RBP10.09□□□□□ -0.79
ABCA4-207ENST00000536513 KCNJ4P48050 445 aa10.09□□□□□ -0.79
ABCA4-207ENST00000536513 FOXD4L5Q5VV16 416 aaPredicted RBP10.09□□□□□ -0.79
ABCA4-207ENST00000536513 FOXD4L4Q8WXT5 416 aaPredicted RBP10.09□□□□□ -0.79
ABCA4-207ENST00000536513 GNAI3P08754 354 aa10.09□□□□□ -0.79
ABCA4-207ENST00000536513 GORABQ5T7V8 394 aa10.09□□□□□ -0.79
ABCA4-207ENST00000536513 ATP6V1AP38606 617 aa10.08□□□□□ -0.8
ABCA4-207ENST00000536513 USP21Q9UK80 565 aa10.08□□□□□ -0.8
ABCA4-207ENST00000536513 TNS3Q68CZ2 1445 aa10.08□□□□□ -0.8
ABCA4-207ENST00000536513 ITSN1Q15811 1721 aa10.08□□□□□ -0.8
ABCA4-207ENST00000536513 HSP90AB1P08238 724 aaKnown RBP10.08□□□□□ -0.8
ABCA4-207ENST00000536513 ADAMTSL3P82987 1691 aa10.08□□□□□ -0.8
ABCA4-207ENST00000536513 FOXD4L6Q3SYB3 417 aaPredicted RBP10.08□□□□□ -0.8
ABCA4-207ENST00000536513 FOXD4L3Q6VB84 417 aaPredicted RBP10.08□□□□□ -0.8
ABCA4-207ENST00000536513 SIRT2Q8IXJ6 389 aa10.08□□□□□ -0.8
ABCA4-207ENST00000536513 HSPA1LP34931 641 aa10.07□□□□□ -0.8
ABCA4-207ENST00000536513 G3BP1Q13283 466 aaKnown RBP eCLIP10.07□□□□□ -0.8
ABCA4-207ENST00000536513 FAM89AQ96GI7 184 aa10.07□□□□□ -0.8
ABCA4-207ENST00000536513 CEP85Q6P2H3 762 aa10.07□□□□□ -0.8
ABCA4-207ENST00000536513 SYNE4Q8N205 404 aa10.07□□□□□ -0.8
ABCA4-207ENST00000536513 NAP1L2Q9ULW6 460 aaPredicted RBP10.07□□□□□ -0.8
ABCA4-207ENST00000536513 IFIT2P09913 472 aaKnown RBP10.07□□□□□ -0.8
ABCA4-207ENST00000536513 SSH2Q76I76 1423 aa10.07□□□□□ -0.8
ABCA4-207ENST00000536513 PIGBQ92521 554 aa10.07□□□□□ -0.8
ABCA4-207ENST00000536513 DNAJC2Q99543 621 aaKnown RBP10.06□□□□□ -0.8
ABCA4-207ENST00000536513 PCDH11XQ9BZA7 1347 aa10.06□□□□□ -0.8
ABCA4-207ENST00000536513 PCDH11YQ9BZA8 1340 aa10.06□□□□□ -0.8
ABCA4-207ENST00000536513 USP44Q9H0E7 712 aa10.06□□□□□ -0.8
ABCA4-207ENST00000536513 ANO2Q9NQ90 1003 aa10.06□□□□□ -0.8
ABCA4-207ENST00000536513 DNTTIP2Q5QJE6 756 aaKnown RBP10.06□□□□□ -0.8
ABCA4-207ENST00000536513 ZNF594Q96JF6 807 aaPredicted RBP10.06□□□□□ -0.8
ABCA4-207ENST00000536513 KDM2BQ8NHM5 1336 aa10.06□□□□□ -0.8
ABCA4-207ENST00000536513 LARP6Q9BRS8 491 aaKnown RBP10.05□□□□□ -0.8
ABCA4-207ENST00000536513 LRRCC1Q9C099 1032 aa10.05□□□□□ -0.8
ABCA4-207ENST00000536513 PXDNQ92626 1479 aa10.05□□□□□ -0.8
ABCA4-207ENST00000536513 HTATSF1O43719 755 aaKnown RBP10.05□□□□□ -0.8
ABCA4-207ENST00000536513 KIF6Q6ZMV9 814 aa10.05□□□□□ -0.8
ABCA4-207ENST00000536513 PTF1AQ7RTS3 328 aa10.05□□□□□ -0.8
ABCA4-207ENST00000536513 AACSQ86V21 672 aa10.05□□□□□ -0.8
ABCA4-207ENST00000536513 SOS2Q07890 1332 aaPredicted RBP10.05□□□□□ -0.8
ABCA4-207ENST00000536513 STK11IPQ8N1F8 1099 aa10.05□□□□□ -0.8
ABCA4-207ENST00000536513 HELBQ8NG08 1087 aaPredicted RBP10.05□□□□□ -0.8
ABCA4-207ENST00000536513 HYPKQ9NX55 129 aa10.05□□□□□ -0.8
ABCA4-207ENST00000536513 KIF20BQ96Q89 1820 aa10.05□□□□□ -0.8
ABCA4-207ENST00000536513 PTPRCP08575 1304 aa10.05□□□□□ -0.8
ABCA4-207ENST00000536513 IQSEC2Q5JU85 1478 aa10.04□□□□□ -0.8
ABCA4-207ENST00000536513 STARD3NLO95772 234 aa10.04□□□□□ -0.8
ABCA4-207ENST00000536513 KSR2Q6VAB6 950 aa10.04□□□□□ -0.8
ABCA4-207ENST00000536513 CARD10Q9BWT7 1032 aa10.04□□□□□ -0.8
ABCA4-207ENST00000536513 BOLA2Q9H3K6 86 aa10.04□□□□□ -0.8
ABCA4-207ENST00000536513 BICC1Q9H694 974 aaKnown RBP10.04□□□□□ -0.8
ABCA4-207ENST00000536513 MSNP26038 577 aaKnown RBP10.04□□□□□ -0.8
ABCA4-207ENST00000536513 LMBR1LQ6UX01 489 aa10.04□□□□□ -0.8
ABCA4-207ENST00000536513 SNRKQ9NRH2 765 aa10.04□□□□□ -0.8
ABCA4-207ENST00000536513 NALCNQ8IZF0 1738 aa10.04□□□□□ -0.8
ABCA4-207ENST00000536513 CASC1Q6TDU7 716 aa10.04□□□□□ -0.8
ABCA4-207ENST00000536513 DDX21Q9NR30 783 aaKnown RBP eCLIP10.04□□□□□ -0.8
ABCA4-207ENST00000536513 SETD1AO15047 1707 aaKnown RBP10.03□□□□□ -0.8
ABCA4-207ENST00000536513 USP32Q8NFA0 1604 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms