RNA–Protein interactions for RNA: ENST00000536509.5

LMO3-214, Transcript of LIM domain only 3, humanhuman

TSL 4

Gene LMO3, Length 550 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-214ENST00000536509 AEBP1Q8IUX7 1158 aa15.11■□□□□ 0.01
LMO3-214ENST00000536509 PIM2Q9P1W9 311 aa15.11■□□□□ 0.01
LMO3-214ENST00000536509 USP42Q9H9J4 1324 aaKnown RBP15.11■□□□□ 0.01
LMO3-214ENST00000536509 SPDYE2BA6NHP3 402 aa15.1■□□□□ 0.01
LMO3-214ENST00000536509 SPDYE6P0CI01 402 aa15.1■□□□□ 0.01
LMO3-214ENST00000536509 IL13P35225 146 aa15.1■□□□□ 0.01
LMO3-214ENST00000536509 APLP1P51693 650 aa15.1■□□□□ 0.01
LMO3-214ENST00000536509 SPDYE2Q495Y8 402 aa15.1■□□□□ 0.01
LMO3-214ENST00000536509 ZPR1O75312 459 aa15.08■□□□□ 0
LMO3-214ENST00000536509 KCNA3P22001 575 aa15.08■□□□□ 0
LMO3-214ENST00000536509 DALRD3Q5D0E6 543 aaKnown RBP15.08■□□□□ 0
LMO3-214ENST00000536509 SLC52A2Q9HAB3 445 aa15.08■□□□□ 0
LMO3-214ENST00000536509 ADAMTS7Q9UKP4 1686 aa15.08■□□□□ 0
LMO3-214ENST00000536509 MRC1P22897 1456 aa15.08■□□□□ 0
LMO3-214ENST00000536509 VASPP50552 380 aaPredicted RBP15.07■□□□□ 0
LMO3-214ENST00000536509 INTS5Q6P9B9 1019 aaKnown RBP15.07■□□□□ 0
LMO3-214ENST00000536509 SBF1O95248 1867 aa15.07■□□□□ 0
LMO3-214ENST00000536509 SRP68Q9UHB9 627 aaKnown RBP15.06■□□□□ 0
LMO3-214ENST00000536509 KDM2BQ8NHM5 1336 aa15.06■□□□□ 0
LMO3-214ENST00000536509 TM4SF1P30408 202 aa15.05■□□□□ -0
LMO3-214ENST00000536509 DDR1Q08345 913 aa15.05■□□□□ -0
LMO3-214ENST00000536509 C9orf131Q5VYM1 1079 aa15.05■□□□□ -0
LMO3-214ENST00000536509 VSIG10Q8N0Z9 540 aa15.05■□□□□ -0
LMO3-214ENST00000536509 AFDNP55196 1824 aaKnown RBP15.04■□□□□ -0
LMO3-214ENST00000536509 TNRC6CQ9HCJ0 1690 aaKnown RBP15.04■□□□□ -0
LMO3-214ENST00000536509 SOS1Q07889 1333 aaPredicted RBP15.04■□□□□ -0
LMO3-214ENST00000536509 POLRMTO00411 1230 aaKnown RBP15.04■□□□□ -0
LMO3-214ENST00000536509 C16orf71Q8IYS4 520 aaPredicted RBP15.04■□□□□ -0
LMO3-214ENST00000536509 RBM46Q8TBY0 533 aaKnown RBP15.04■□□□□ -0
LMO3-214ENST00000536509 UBR2Q8IWV8 1755 aa15.03■□□□□ -0
LMO3-214ENST00000536509 DLEC1Q9Y238 1755 aa15.03■□□□□ -0
LMO3-214ENST00000536509 NRXN2Q9P2S2 1712 aa15.03■□□□□ -0
LMO3-214ENST00000536509 ZC3H4Q9UPT8 1303 aaKnown RBP15.03■□□□□ -0
LMO3-214ENST00000536509 RNMTO43148 476 aaKnown RBP15.03■□□□□ -0
LMO3-214ENST00000536509 CYP19A1P11511 503 aaPredicted RBP15.03■□□□□ -0
LMO3-214ENST00000536509 DNAJC10Q8IXB1 793 aa15.03■□□□□ -0
LMO3-214ENST00000536509 NMRK2Q9NPI5 230 aa15.03■□□□□ -0
LMO3-214ENST00000536509 NARFQ9UHQ1 456 aa15.03■□□□□ -0
LMO3-214ENST00000536509 SSUH2Q9Y2M2 353 aa15.03■□□□□ -0
LMO3-214ENST00000536509 COL15A1P39059 1388 aa15.02■□□□□ -0
LMO3-214ENST00000536509 DIAPH1O60610 1272 aaKnown RBP15.02■□□□□ -0
LMO3-214ENST00000536509 FSTL1Q12841 308 aa15.02■□□□□ -0
LMO3-214ENST00000536509 USPL1Q5W0Q7 1092 aa15.02■□□□□ -0
LMO3-214ENST00000536509 CCER1Q8TC90 406 aaPredicted RBP15.02■□□□□ -0
LMO3-214ENST00000536509 LGR6Q9HBX8 967 aa15.02■□□□□ -0
LMO3-214ENST00000536509 WDR90Q96KV7 1748 aa15.02□□□□□ -0.01
LMO3-214ENST00000536509 KCPQ6ZWJ8 1503 aa15.02□□□□□ -0.01
LMO3-214ENST00000536509 RNF181Q9P0P0 153 aa15.01□□□□□ -0.01
LMO3-214ENST00000536509 HMOX1P09601 288 aa15□□□□□ -0.01
LMO3-214ENST00000536509 CHRNA5P30532 468 aa15□□□□□ -0.01
LMO3-214ENST00000536509 DNAJC5GQ8N7S2 189 aa15□□□□□ -0.01
LMO3-214ENST00000536509 KIF7Q2M1P5 1343 aa14.99□□□□□ -0.01
LMO3-214ENST00000536509 A0A087WZG4 1122 aa14.99□□□□□ -0.01
LMO3-214ENST00000536509 STARD3NLO95772 234 aa14.99□□□□□ -0.01
LMO3-214ENST00000536509 SLC39A6Q13433 755 aa14.99□□□□□ -0.01
LMO3-214ENST00000536509 NFIXQ14938 502 aa14.99□□□□□ -0.01
LMO3-214ENST00000536509 MTHFSDQ2M296 383 aaKnown RBP14.99□□□□□ -0.01
LMO3-214ENST00000536509 TTC5Q8N0Z6 440 aa14.99□□□□□ -0.01
LMO3-214ENST00000536509 TEX13AQ9BXU3 409 aaPredicted RBP14.99□□□□□ -0.01
LMO3-214ENST00000536509 PER1O15534 1290 aaPredicted RBP14.98□□□□□ -0.01
LMO3-214ENST00000536509 PDZRN3Q9UPQ7 1066 aa14.98□□□□□ -0.01
LMO3-214ENST00000536509 ZBTB1Q9Y2K1 713 aa14.98□□□□□ -0.01
LMO3-214ENST00000536509 NPC1L1Q9UHC9 1359 aa14.98□□□□□ -0.01
LMO3-214ENST00000536509 CCDC88AQ3V6T2 1871 aa14.97□□□□□ -0.01
LMO3-214ENST00000536509 SERPINB2P05120 415 aa14.97□□□□□ -0.01
LMO3-214ENST00000536509 SIPA1L3O60292 1781 aaPredicted RBP14.96□□□□□ -0.01
LMO3-214ENST00000536509 H0YIN7 160 aa14.96□□□□□ -0.01
LMO3-214ENST00000536509 LMNB1P20700 586 aa14.96□□□□□ -0.01
LMO3-214ENST00000536509 TTLL6Q8N841 843 aa14.96□□□□□ -0.01
LMO3-214ENST00000536509 GAS2L2Q8NHY3 880 aa14.96□□□□□ -0.01
LMO3-214ENST00000536509 EIF5P55010 431 aaKnown RBP14.95□□□□□ -0.02
LMO3-214ENST00000536509 TEFQ10587 303 aa14.95□□□□□ -0.02
LMO3-214ENST00000536509 SMC1BQ8NDV3 1235 aa14.95□□□□□ -0.02
LMO3-214ENST00000536509 BCL2L12Q9HB09 334 aa14.95□□□□□ -0.02
LMO3-214ENST00000536509 RRAGCQ9HB90 399 aa14.95□□□□□ -0.02
LMO3-214ENST00000536509 SCN7AQ01118 1682 aa14.94□□□□□ -0.02
LMO3-214ENST00000536509 GNAT3A8MTJ3 354 aa14.94□□□□□ -0.02
LMO3-214ENST00000536509 CANXP27824 592 aaKnown RBP14.94□□□□□ -0.02
LMO3-214ENST00000536509 CC2D1BQ5T0F9 858 aaKnown RBP14.94□□□□□ -0.02
LMO3-214ENST00000536509 ZNF790Q6PG37 636 aa14.94□□□□□ -0.02
LMO3-214ENST00000536509 KLRG1Q96E93 195 aa14.94□□□□□ -0.02
LMO3-214ENST00000536509 TIAM2Q8IVF5 1701 aa14.94□□□□□ -0.02
LMO3-214ENST00000536509 DICER1Q9UPY3 1922 aaKnown RBP14.94□□□□□ -0.02
LMO3-214ENST00000536509 GLTPD2A6NH11 291 aa14.93□□□□□ -0.02
LMO3-214ENST00000536509 VEGFAP15692 232 aaPredicted RBP14.93□□□□□ -0.02
LMO3-214ENST00000536509 PDE6BP35913 854 aa14.93□□□□□ -0.02
LMO3-214ENST00000536509 NPM2Q86SE8 214 aaKnown RBP14.93□□□□□ -0.02
LMO3-214ENST00000536509 C2CD5Q86YS7 1000 aa14.93□□□□□ -0.02
LMO3-214ENST00000536509 IFNLR1Q8IU57 520 aaPredicted RBP14.93□□□□□ -0.02
LMO3-214ENST00000536509 HEG1Q9ULI3 1381 aa14.93□□□□□ -0.02
LMO3-214ENST00000536509 COL3A1P02461 1466 aaPredicted RBP14.93□□□□□ -0.02
LMO3-214ENST00000536509 IL6STP40189 918 aaPredicted RBP14.92□□□□□ -0.02
LMO3-214ENST00000536509 JMYQ8N9B5 988 aa14.92□□□□□ -0.02
LMO3-214ENST00000536509 ZNF496Q96IT1 587 aaPredicted RBP14.92□□□□□ -0.02
LMO3-214ENST00000536509 BRIP1Q9BX63 1249 aa14.92□□□□□ -0.02
LMO3-214ENST00000536509 ANKRD31Q8N7Z5 1873 aa14.92□□□□□ -0.02
LMO3-214ENST00000536509 CARMIL3Q8ND23 1372 aa14.91□□□□□ -0.02
LMO3-214ENST00000536509 U2SURPO15042 1029 aaKnown RBP14.91□□□□□ -0.02
LMO3-214ENST00000536509 RASSF7Q02833 373 aa14.91□□□□□ -0.02
LMO3-214ENST00000536509 FMNL2Q96PY5 1086 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms