RNA–Protein interactions for RNA: ENST00000536297.1

CLPB-207, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

TSL 5

Gene CLPB, Length 479 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-207ENST00000536297 WDR90Q96KV7 1748 aa11.44□□□□□ -0.58
CLPB-207ENST00000536297 SOS1Q07889 1333 aaPredicted RBP11.44□□□□□ -0.58
CLPB-207ENST00000536297 RNMTO43148 476 aaKnown RBP11.44□□□□□ -0.58
CLPB-207ENST00000536297 CYP19A1P11511 503 aaPredicted RBP11.44□□□□□ -0.58
CLPB-207ENST00000536297 RBM46Q8TBY0 533 aaKnown RBP11.44□□□□□ -0.58
CLPB-207ENST00000536297 RRAGCQ9HB90 399 aa11.44□□□□□ -0.58
CLPB-207ENST00000536297 SBF1O95248 1867 aa11.44□□□□□ -0.58
CLPB-207ENST00000536297 AFDNP55196 1824 aaKnown RBP11.44□□□□□ -0.58
CLPB-207ENST00000536297 KDM2BQ8NHM5 1336 aa11.43□□□□□ -0.58
CLPB-207ENST00000536297 RASSF7Q02833 373 aa11.43□□□□□ -0.58
CLPB-207ENST00000536297 NFIXQ14938 502 aa11.43□□□□□ -0.58
CLPB-207ENST00000536297 AMER1Q5JTC6 1135 aaPredicted RBP11.43□□□□□ -0.58
CLPB-207ENST00000536297 ZBTB1Q9Y2K1 713 aa11.43□□□□□ -0.58
CLPB-207ENST00000536297 MRC1P22897 1456 aa11.43□□□□□ -0.58
CLPB-207ENST00000536297 COL15A1P39059 1388 aa11.42□□□□□ -0.58
CLPB-207ENST00000536297 MTHFSDQ2M296 383 aaKnown RBP11.42□□□□□ -0.58
CLPB-207ENST00000536297 NARFQ9UHQ1 456 aa11.42□□□□□ -0.58
CLPB-207ENST00000536297 TNRC6CQ9HCJ0 1690 aaKnown RBP11.41□□□□□ -0.58
CLPB-207ENST00000536297 SERPINB2P05120 415 aa11.41□□□□□ -0.58
CLPB-207ENST00000536297 CANXP27824 592 aaKnown RBP11.41□□□□□ -0.58
CLPB-207ENST00000536297 BCL2L12Q9HB09 334 aa11.41□□□□□ -0.58
CLPB-207ENST00000536297 NRXN2Q9P2S2 1712 aa11.4□□□□□ -0.58
CLPB-207ENST00000536297 KIF7Q2M1P5 1343 aa11.4□□□□□ -0.58
CLPB-207ENST00000536297 FSTL1Q12841 308 aa11.4□□□□□ -0.58
CLPB-207ENST00000536297 CNGB1Q14028 1251 aaPredicted RBP11.4□□□□□ -0.58
CLPB-207ENST00000536297 CC2D1BQ5T0F9 858 aaKnown RBP11.4□□□□□ -0.58
CLPB-207ENST00000536297 BICDL1Q6ZP65 573 aa11.4□□□□□ -0.58
CLPB-207ENST00000536297 DLEC1Q9Y238 1755 aa11.4□□□□□ -0.58
CLPB-207ENST00000536297 CARMIL3Q8ND23 1372 aa11.4□□□□□ -0.59
CLPB-207ENST00000536297 UBR2Q8IWV8 1755 aa11.39□□□□□ -0.59
CLPB-207ENST00000536297 DIAPH1O60610 1272 aaKnown RBP11.39□□□□□ -0.59
CLPB-207ENST00000536297 PRELPP51888 382 aa11.39□□□□□ -0.59
CLPB-207ENST00000536297 C2CD5Q86YS7 1000 aa11.39□□□□□ -0.59
CLPB-207ENST00000536297 CCDC88AQ3V6T2 1871 aa11.38□□□□□ -0.59
CLPB-207ENST00000536297 TIAM2Q8IVF5 1701 aa11.38□□□□□ -0.59
CLPB-207ENST00000536297 TTC5Q8N0Z6 440 aa11.38□□□□□ -0.59
CLPB-207ENST00000536297 VSIG10Q8N0Z9 540 aa11.38□□□□□ -0.59
CLPB-207ENST00000536297 TTLL6Q8N841 843 aa11.38□□□□□ -0.59
CLPB-207ENST00000536297 KLRG1Q96E93 195 aa11.38□□□□□ -0.59
CLPB-207ENST00000536297 ZNF330Q9Y3S2 320 aaPredicted RBP11.38□□□□□ -0.59
CLPB-207ENST00000536297 H0YIN7 160 aa11.37□□□□□ -0.59
CLPB-207ENST00000536297 LMNB1P20700 586 aa11.37□□□□□ -0.59
CLPB-207ENST00000536297 CCDC24Q8N4L8 307 aa11.37□□□□□ -0.59
CLPB-207ENST00000536297 SMC1BQ8NDV3 1235 aa11.37□□□□□ -0.59
CLPB-207ENST00000536297 ZNF219Q9P2Y4 722 aaPredicted RBP11.37□□□□□ -0.59
CLPB-207ENST00000536297 ANKRD31Q8N7Z5 1873 aa11.36□□□□□ -0.59
CLPB-207ENST00000536297 GLTPD2A6NH11 291 aa11.36□□□□□ -0.59
CLPB-207ENST00000536297 U2SURPO15042 1029 aaKnown RBP11.36□□□□□ -0.59
CLPB-207ENST00000536297 PER1O15534 1290 aaPredicted RBP11.36□□□□□ -0.59
CLPB-207ENST00000536297 STARD3NLO95772 234 aa11.36□□□□□ -0.59
CLPB-207ENST00000536297 EIF5P55010 431 aaKnown RBP11.36□□□□□ -0.59
CLPB-207ENST00000536297 TBC1D9BQ66K14 1250 aa11.36□□□□□ -0.59
CLPB-207ENST00000536297 ZNF622Q969S3 477 aaKnown RBP eCLIP11.36□□□□□ -0.59
CLPB-207ENST00000536297 ZNF496Q96IT1 587 aaPredicted RBP11.36□□□□□ -0.59
CLPB-207ENST00000536297 A0A087WZG4 1122 aa11.35□□□□□ -0.59
CLPB-207ENST00000536297 NFKBIEO00221 500 aa11.35□□□□□ -0.59
CLPB-207ENST00000536297 TEFQ10587 303 aa11.35□□□□□ -0.59
CLPB-207ENST00000536297 JMYQ8N9B5 988 aa11.35□□□□□ -0.59
CLPB-207ENST00000536297 IL17REQ8NFR9 667 aa11.35□□□□□ -0.59
CLPB-207ENST00000536297 TBC1D2BQ9UPU7 963 aa11.35□□□□□ -0.59
CLPB-207ENST00000536297 SCN7AQ01118 1682 aa11.35□□□□□ -0.59
CLPB-207ENST00000536297 SIPA1L3O60292 1781 aaPredicted RBP11.35□□□□□ -0.59
CLPB-207ENST00000536297 COL11A2P13942 1736 aaPredicted RBP11.35□□□□□ -0.59
CLPB-207ENST00000536297 ZC3H4Q9UPT8 1303 aaKnown RBP11.35□□□□□ -0.59
CLPB-207ENST00000536297 COL3A1P02461 1466 aaPredicted RBP11.34□□□□□ -0.59
CLPB-207ENST00000536297 HEG1Q9ULI3 1381 aa11.34□□□□□ -0.59
CLPB-207ENST00000536297 GNAT3A8MTJ3 354 aa11.34□□□□□ -0.59
CLPB-207ENST00000536297 C21orf2O43822 256 aa11.34□□□□□ -0.59
CLPB-207ENST00000536297 VEGFAP15692 232 aaPredicted RBP11.34□□□□□ -0.59
CLPB-207ENST00000536297 COL13A1Q5TAT6 717 aaPredicted RBP11.34□□□□□ -0.59
CLPB-207ENST00000536297 ZNF790Q6PG37 636 aa11.34□□□□□ -0.59
CLPB-207ENST00000536297 MIER1Q8N108 512 aa11.34□□□□□ -0.59
CLPB-207ENST00000536297 A1BGP04217 495 aa11.33□□□□□ -0.6
CLPB-207ENST00000536297 DDX10Q13206 875 aaKnown RBP11.33□□□□□ -0.6
CLPB-207ENST00000536297 PRR5LQ6MZQ0 368 aa11.33□□□□□ -0.6
CLPB-207ENST00000536297 GAS2L2Q8NHY3 880 aa11.33□□□□□ -0.6
CLPB-207ENST00000536297 CACNA1SQ13698 1873 aa11.33□□□□□ -0.6
CLPB-207ENST00000536297 POTECB2RU33 542 aa11.32□□□□□ -0.6
CLPB-207ENST00000536297 KCNQ3O43525 872 aa11.32□□□□□ -0.6
CLPB-207ENST00000536297 PDE6BP35913 854 aa11.32□□□□□ -0.6
CLPB-207ENST00000536297 BRIP1Q9BX63 1249 aa11.32□□□□□ -0.6
CLPB-207ENST00000536297 TEX13AQ9BXU3 409 aaPredicted RBP11.32□□□□□ -0.6
CLPB-207ENST00000536297 NPHP1O15259 732 aa11.31□□□□□ -0.6
CLPB-207ENST00000536297 CAPN15O75808 1086 aa11.31□□□□□ -0.6
CLPB-207ENST00000536297 IL6STP40189 918 aaPredicted RBP11.31□□□□□ -0.6
CLPB-207ENST00000536297 PIP4K2AP48426 406 aaPredicted RBP11.31□□□□□ -0.6
CLPB-207ENST00000536297 ERFEQ4G0M1 354 aa11.31□□□□□ -0.6
CLPB-207ENST00000536297 DPY19L2Q6NUT2 758 aa11.31□□□□□ -0.6
CLPB-207ENST00000536297 PHACTR3Q96KR7 559 aa11.31□□□□□ -0.6
CLPB-207ENST00000536297 FMNL2Q96PY5 1086 aa11.31□□□□□ -0.6
CLPB-207ENST00000536297 SETDB2Q96T68 719 aa11.31□□□□□ -0.6
CLPB-207ENST00000536297 FER1L6Q2WGJ9 1857 aa11.31□□□□□ -0.6
CLPB-207ENST00000536297 DICER1Q9UPY3 1922 aaKnown RBP11.31□□□□□ -0.6
CLPB-207ENST00000536297 SLX4Q8IY92 1834 aa11.3□□□□□ -0.6
CLPB-207ENST00000536297 BTBD11A6QL63 1104 aa11.3□□□□□ -0.6
CLPB-207ENST00000536297 CAMTA2O94983 1202 aa11.3□□□□□ -0.6
CLPB-207ENST00000536297 NPM2Q86SE8 214 aaKnown RBP11.3□□□□□ -0.6
CLPB-207ENST00000536297 CNBD1Q8NA66 436 aa11.3□□□□□ -0.6
CLPB-207ENST00000536297 BCORQ6W2J9 1755 aa11.3□□□□□ -0.6
CLPB-207ENST00000536297 PRAMEF22A3QJZ6 481 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms