RNA–Protein interactions for RNA: ENST00000536189.6

TIMP2-202, Transcript of TIMP metallopeptidase inhibitor 2, humanhuman

TSL 2 BASIC

Gene TIMP2, Length 3,415 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP2-202ENST00000536189 CHMP3Q9Y3E7 222 aa11.89□□□□□ -0.51
TIMP2-202ENST00000536189 TOM1O60784 492 aa11.89□□□□□ -0.51
TIMP2-202ENST00000536189 CEP85Q6P2H3 762 aa11.89□□□□□ -0.51
TIMP2-202ENST00000536189 IPO9Q96P70 1041 aaKnown RBP11.89□□□□□ -0.51
TIMP2-202ENST00000536189 CPDO75976 1380 aa11.88□□□□□ -0.51
TIMP2-202ENST00000536189 RGPD5Q99666 1765 aa11.88□□□□□ -0.51
TIMP2-202ENST00000536189 XIRP1Q702N8 1843 aaKnown RBP11.88□□□□□ -0.51
TIMP2-202ENST00000536189 ZNF496Q96IT1 587 aaPredicted RBP11.88□□□□□ -0.51
TIMP2-202ENST00000536189 GCC1Q96CN9 775 aa11.88□□□□□ -0.51
TIMP2-202ENST00000536189 DCAF5Q96JK2 942 aa11.88□□□□□ -0.51
TIMP2-202ENST00000536189 CCDC85AQ96PX6 553 aaPredicted RBP11.88□□□□□ -0.51
TIMP2-202ENST00000536189 SMARCA5O60264 1052 aaPredicted RBP11.88□□□□□ -0.51
TIMP2-202ENST00000536189 DBF4Q9UBU7 674 aaPredicted RBP11.88□□□□□ -0.51
TIMP2-202ENST00000536189 IL2RBP14784 551 aa11.87□□□□□ -0.51
TIMP2-202ENST00000536189 SLC4A3P48751 1232 aa11.87□□□□□ -0.51
TIMP2-202ENST00000536189 ANKRD44Q8N8A2 993 aa11.87□□□□□ -0.51
TIMP2-202ENST00000536189 GNAI2P04899 355 aa11.87□□□□□ -0.51
TIMP2-202ENST00000536189 C16orf71Q8IYS4 520 aaPredicted RBP11.87□□□□□ -0.51
TIMP2-202ENST00000536189 CAMTA1Q9Y6Y1 1673 aa11.86□□□□□ -0.51
TIMP2-202ENST00000536189 RPAP2Q8IXW5 612 aaPredicted RBP11.86□□□□□ -0.51
TIMP2-202ENST00000536189 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.86□□□□□ -0.51
TIMP2-202ENST00000536189 LRRFIP2Q9Y608 721 aaKnown RBP11.86□□□□□ -0.51
TIMP2-202ENST00000536189 SRCIN1Q9C0H9 1055 aa11.86□□□□□ -0.51
TIMP2-202ENST00000536189 EXOC6BQ9Y2D4 811 aa11.86□□□□□ -0.51
TIMP2-202ENST00000536189 USP16Q9Y5T5 823 aa11.86□□□□□ -0.51
TIMP2-202ENST00000536189 KDM6AO15550 1401 aaPredicted RBP11.86□□□□□ -0.51
TIMP2-202ENST00000536189 NCAPD2Q15021 1401 aa11.86□□□□□ -0.51
TIMP2-202ENST00000536189 DNAAF4Q8WXU2 420 aa11.86□□□□□ -0.51
TIMP2-202ENST00000536189 BRPF3Q9ULD4 1205 aa11.86□□□□□ -0.51
TIMP2-202ENST00000536189 UBTFL1P0CB47 393 aaPredicted RBP11.85□□□□□ -0.51
TIMP2-202ENST00000536189 MAP3K2Q9Y2U5 619 aa11.85□□□□□ -0.51
TIMP2-202ENST00000536189 NPHP1O15259 732 aa11.85□□□□□ -0.51
TIMP2-202ENST00000536189 CARD10Q9BWT7 1032 aa11.85□□□□□ -0.51
TIMP2-202ENST00000536189 USP44Q9H0E7 712 aa11.85□□□□□ -0.51
TIMP2-202ENST00000536189 NOP58Q9Y2X3 529 aaKnown RBP11.85□□□□□ -0.51
TIMP2-202ENST00000536189 HSP90AB1P08238 724 aaKnown RBP11.85□□□□□ -0.51
TIMP2-202ENST00000536189 GNAI3P08754 354 aa11.85□□□□□ -0.51
TIMP2-202ENST00000536189 HOXB7P09629 217 aa11.85□□□□□ -0.51
TIMP2-202ENST00000536189 MFAP1P55081 439 aaKnown RBP11.85□□□□□ -0.51
TIMP2-202ENST00000536189 FAM98CQ17RN3 349 aaKnown RBP11.85□□□□□ -0.51
TIMP2-202ENST00000536189 DCTPP1Q9H773 170 aa11.85□□□□□ -0.51
TIMP2-202ENST00000536189 PRDM10Q9NQV6 1147 aa11.85□□□□□ -0.51
TIMP2-202ENST00000536189 SOS1Q07889 1333 aaPredicted RBP11.84□□□□□ -0.51
TIMP2-202ENST00000536189 PHRF1Q9P1Y6 1649 aaKnown RBP11.84□□□□□ -0.51
TIMP2-202ENST00000536189 PNMA6EA0A0J9YXQ4 647 aa11.84□□□□□ -0.51
TIMP2-202ENST00000536189 HMMRO75330 724 aa11.84□□□□□ -0.51
TIMP2-202ENST00000536189 NBPF7P0C2Y1 421 aaPredicted RBP11.84□□□□□ -0.51
TIMP2-202ENST00000536189 OS9Q13438 667 aaPredicted RBP11.84□□□□□ -0.51
TIMP2-202ENST00000536189 CWF19L2Q2TBE0 894 aaKnown RBP11.84□□□□□ -0.51
TIMP2-202ENST00000536189 OTUD7AQ8TE49 926 aaPredicted RBP11.84□□□□□ -0.51
TIMP2-202ENST00000536189 RIC3Q7Z5B4 369 aa11.83□□□□□ -0.52
TIMP2-202ENST00000536189 COL5A2P05997 1499 aaPredicted RBP11.83□□□□□ -0.52
TIMP2-202ENST00000536189 PCDH11XQ9BZA7 1347 aa11.83□□□□□ -0.52
TIMP2-202ENST00000536189 PCDH11YQ9BZA8 1340 aa11.83□□□□□ -0.52
TIMP2-202ENST00000536189 FMNL2Q96PY5 1086 aa11.83□□□□□ -0.52
TIMP2-202ENST00000536189 UPF2Q9HAU5 1272 aaKnown RBP11.83□□□□□ -0.52
TIMP2-202ENST00000536189 C9orf78Q9NZ63 289 aaPredicted RBP11.83□□□□□ -0.52
TIMP2-202ENST00000536189 COPS6Q7L5N1 327 aa11.82□□□□□ -0.52
TIMP2-202ENST00000536189 SNRPA1P09661 255 aaKnown RBP11.82□□□□□ -0.52
TIMP2-202ENST00000536189 LRRC37A3O60309 1634 aa11.82□□□□□ -0.52
TIMP2-202ENST00000536189 BEND3Q5T5X7 828 aa11.82□□□□□ -0.52
TIMP2-202ENST00000536189 SMIM5Q71RC9 77 aa11.82□□□□□ -0.52
TIMP2-202ENST00000536189 XAGE3Q8WTP9 111 aa11.82□□□□□ -0.52
TIMP2-202ENST00000536189 DDX21Q9NR30 783 aaKnown RBP eCLIP11.82□□□□□ -0.52
TIMP2-202ENST00000536189 ATP10DQ9P241 1426 aa11.81□□□□□ -0.52
TIMP2-202ENST00000536189 HYPKQ9NX55 129 aa11.81□□□□□ -0.52
TIMP2-202ENST00000536189 ATP5J2-PTCD1G3V325 749 aa11.8□□□□□ -0.52
TIMP2-202ENST00000536189 TSHZ3Q63HK5 1081 aa11.8□□□□□ -0.52
TIMP2-202ENST00000536189 KSR2Q6VAB6 950 aa11.8□□□□□ -0.52
TIMP2-202ENST00000536189 DDX58O95786 925 aaKnown RBP11.8□□□□□ -0.52
TIMP2-202ENST00000536189 SPRYD3Q8NCJ5 442 aa11.8□□□□□ -0.52
TIMP2-202ENST00000536189 ADCY9O60503 1353 aa11.8□□□□□ -0.52
TIMP2-202ENST00000536189 COL18A1P39060 1754 aa11.8□□□□□ -0.52
TIMP2-202ENST00000536189 OVOS2A0A0G2JMS6 1433 aa11.8□□□□□ -0.52
TIMP2-202ENST00000536189 SRGAP3O43295 1099 aa11.8□□□□□ -0.52
TIMP2-202ENST00000536189 PDIA6Q15084 440 aa11.8□□□□□ -0.52
TIMP2-202ENST00000536189 PPP1R42Q7Z4L9 355 aa11.8□□□□□ -0.52
TIMP2-202ENST00000536189 ZBTB3Q9H5J0 574 aa11.79□□□□□ -0.52
TIMP2-202ENST00000536189 IL1RAPL2Q9NP60 686 aa11.79□□□□□ -0.52
TIMP2-202ENST00000536189 SURF6O75683 361 aaKnown RBP11.79□□□□□ -0.52
TIMP2-202ENST00000536189 ATP8B2P98198 1209 aa11.79□□□□□ -0.52
TIMP2-202ENST00000536189 PLEKHM2Q8IWE5 1019 aa11.79□□□□□ -0.52
TIMP2-202ENST00000536189 EXOC5O00471 708 aa11.79□□□□□ -0.52
TIMP2-202ENST00000536189 A1BGP04217 495 aa11.79□□□□□ -0.52
TIMP2-202ENST00000536189 BICDL1Q6ZP65 573 aa11.79□□□□□ -0.52
TIMP2-202ENST00000536189 TMOD3Q9NYL9 352 aa11.79□□□□□ -0.52
TIMP2-202ENST00000536189 MYD88Q99836 296 aa11.78□□□□□ -0.52
TIMP2-202ENST00000536189 SIL1Q9H173 461 aa11.78□□□□□ -0.52
TIMP2-202ENST00000536189 WWC3Q9ULE0 1092 aa11.78□□□□□ -0.52
TIMP2-202ENST00000536189 HEG1Q9ULI3 1381 aa11.78□□□□□ -0.52
TIMP2-202ENST00000536189 DDRGK1Q96HY6 314 aa11.77□□□□□ -0.52
TIMP2-202ENST00000536189 ASAP1Q9ULH1 1129 aa11.77□□□□□ -0.52
TIMP2-202ENST00000536189 LMO7Q8WWI1 1683 aa11.77□□□□□ -0.52
TIMP2-202ENST00000536189 NEXNQ0ZGT2 675 aa11.77□□□□□ -0.53
TIMP2-202ENST00000536189 NBR1Q14596 966 aa11.77□□□□□ -0.53
TIMP2-202ENST00000536189 ANKRD13DQ6ZTN6 518 aa11.77□□□□□ -0.53
TIMP2-202ENST00000536189 ERVV-2B6SEH9 535 aa11.77□□□□□ -0.53
TIMP2-202ENST00000536189 BMP2KLQ5H9B9 411 aa11.77□□□□□ -0.53
TIMP2-202ENST00000536189 FAM208AQ9UK61 1670 aaKnown RBP11.77□□□□□ -0.53
TIMP2-202ENST00000536189 GSPT1P15170 499 aaKnown RBP11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms