RNA–Protein interactions for RNA: ENST00000535906.1

VPS33B-202, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2 BASIC

Gene VPS33B, Length 2,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-202ENST00000535906 PHKG2P15735 406 aa16.47■□□□□ 0.23
VPS33B-202ENST00000535906 SLC39A6Q13433 755 aa16.47■□□□□ 0.23
VPS33B-202ENST00000535906 BRPF3Q9ULD4 1205 aa16.47■□□□□ 0.23
VPS33B-202ENST00000535906 EIF5BO60841 1220 aaKnown RBP16.46■□□□□ 0.23
VPS33B-202ENST00000535906 MX1P20591 662 aa16.46■□□□□ 0.23
VPS33B-202ENST00000535906 POLA2Q14181 598 aa16.46■□□□□ 0.23
VPS33B-202ENST00000535906 MCM4P33991 863 aa16.46■□□□□ 0.23
VPS33B-202ENST00000535906 ZNF790Q6PG37 636 aa16.46■□□□□ 0.23
VPS33B-202ENST00000535906 CASC1Q6TDU7 716 aa16.46■□□□□ 0.23
VPS33B-202ENST00000535906 NFATC2IPQ8NCF5 419 aa16.46■□□□□ 0.23
VPS33B-202ENST00000535906 SLC52A2Q9HAB3 445 aa16.46■□□□□ 0.23
VPS33B-202ENST00000535906 SPG7Q9UQ90 795 aa16.46■□□□□ 0.23
VPS33B-202ENST00000535906 MAP3K2Q9Y2U5 619 aa16.46■□□□□ 0.23
VPS33B-202ENST00000535906 SCN11AQ9UI33 1791 aa16.46■□□□□ 0.22
VPS33B-202ENST00000535906 BRINP3Q76B58 766 aa16.45■□□□□ 0.22
VPS33B-202ENST00000535906 SRGAP3O43295 1099 aa16.45■□□□□ 0.22
VPS33B-202ENST00000535906 DDIT3P35638 169 aa16.45■□□□□ 0.22
VPS33B-202ENST00000535906 IL1RAPL2Q9NP60 686 aa16.45■□□□□ 0.22
VPS33B-202ENST00000535906 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.45■□□□□ 0.22
VPS33B-202ENST00000535906 TUBGCP6Q96RT7 1819 aa16.44■□□□□ 0.22
VPS33B-202ENST00000535906 SURF6O75683 361 aaKnown RBP16.44■□□□□ 0.22
VPS33B-202ENST00000535906 KSR2Q6VAB6 950 aa16.44■□□□□ 0.22
VPS33B-202ENST00000535906 HSP90AB1P08238 724 aaKnown RBP16.44■□□□□ 0.22
VPS33B-202ENST00000535906 PDIA6Q15084 440 aa16.44■□□□□ 0.22
VPS33B-202ENST00000535906 IFNL2Q8IZJ0 200 aa16.44■□□□□ 0.22
VPS33B-202ENST00000535906 HYPKQ9NX55 129 aa16.44■□□□□ 0.22
VPS33B-202ENST00000535906 STAP2Q9UGK3 403 aa16.44■□□□□ 0.22
VPS33B-202ENST00000535906 CYP27B1O15528 508 aa16.43■□□□□ 0.22
VPS33B-202ENST00000535906 DDX21Q9NR30 783 aaKnown RBP eCLIP16.43■□□□□ 0.22
VPS33B-202ENST00000535906 CPDO75976 1380 aa16.43■□□□□ 0.22
VPS33B-202ENST00000535906 K7ELQ4 463 aaPredicted RBP16.42■□□□□ 0.22
VPS33B-202ENST00000535906 ERC2O15083 957 aa16.42■□□□□ 0.22
VPS33B-202ENST00000535906 CWF19L2Q2TBE0 894 aaKnown RBP16.42■□□□□ 0.22
VPS33B-202ENST00000535906 RAB11FIP3O75154 756 aa16.41■□□□□ 0.22
VPS33B-202ENST00000535906 ABCC6O95255 1503 aa16.41■□□□□ 0.22
VPS33B-202ENST00000535906 ALDH1L1O75891 902 aa16.41■□□□□ 0.22
VPS33B-202ENST00000535906 REC8O95072 547 aa16.41■□□□□ 0.22
VPS33B-202ENST00000535906 AIMP1Q12904 312 aaKnown RBP16.41■□□□□ 0.22
VPS33B-202ENST00000535906 RHPN1Q8TCX5 695 aa16.41■□□□□ 0.22
VPS33B-202ENST00000535906 STRCQ7RTU9 1775 aa16.41■□□□□ 0.22
VPS33B-202ENST00000535906 C5P01031 1676 aa16.4■□□□□ 0.22
VPS33B-202ENST00000535906 RABEP1Q15276 862 aa16.4■□□□□ 0.22
VPS33B-202ENST00000535906 NUTM1Q86Y26 1132 aa16.4■□□□□ 0.22
VPS33B-202ENST00000535906 C9orf78Q9NZ63 289 aaPredicted RBP16.4■□□□□ 0.22
VPS33B-202ENST00000535906 UNC5CLQ8IV45 518 aa16.4■□□□□ 0.22
VPS33B-202ENST00000535906 RILPL2Q969X0 211 aa16.4■□□□□ 0.22
VPS33B-202ENST00000535906 ZNF496Q96IT1 587 aaPredicted RBP16.4■□□□□ 0.22
VPS33B-202ENST00000535906 DCAF5Q96JK2 942 aa16.4■□□□□ 0.22
VPS33B-202ENST00000535906 CIZ1Q9ULV3 898 aaPredicted RBP16.4■□□□□ 0.22
VPS33B-202ENST00000535906 TRIM6-TRIM34B2RNG4 842 aa16.39■□□□□ 0.21
VPS33B-202ENST00000535906 MTX1Q13505 466 aa16.39■□□□□ 0.21
VPS33B-202ENST00000535906 KIF1BPQ96EK5 621 aa16.39■□□□□ 0.21
VPS33B-202ENST00000535906 FOXD4L1Q9NU39 408 aa16.39■□□□□ 0.21
VPS33B-202ENST00000535906 MYL6BP14649 208 aa16.38■□□□□ 0.21
VPS33B-202ENST00000535906 LINS1Q8NG48 757 aa16.38■□□□□ 0.21
VPS33B-202ENST00000535906 SLAIN2Q9P270 581 aa16.38■□□□□ 0.21
VPS33B-202ENST00000535906 ZNF335Q9H4Z2 1342 aaPredicted RBP16.38■□□□□ 0.21
VPS33B-202ENST00000535906 PKD1L3Q7Z443 1732 aa16.38■□□□□ 0.21
VPS33B-202ENST00000535906 DDX58O95786 925 aaKnown RBP16.38■□□□□ 0.21
VPS33B-202ENST00000535906 HSP90AA1P07900 732 aaKnown RBP16.38■□□□□ 0.21
VPS33B-202ENST00000535906 ESYT1Q9BSJ8 1104 aa16.38■□□□□ 0.21
VPS33B-202ENST00000535906 AOX1Q06278 1338 aa16.38■□□□□ 0.21
VPS33B-202ENST00000535906 CHMLP26374 656 aa16.37■□□□□ 0.21
VPS33B-202ENST00000535906 L1TD1Q5T7N2 865 aaKnown RBP16.37■□□□□ 0.21
VPS33B-202ENST00000535906 USP16Q9Y5T5 823 aa16.37■□□□□ 0.21
VPS33B-202ENST00000535906 PLEKHG2Q9H7P9 1386 aa16.37■□□□□ 0.21
VPS33B-202ENST00000535906 MRC1P22897 1456 aa16.37■□□□□ 0.21
VPS33B-202ENST00000535906 KDM4FA0A1W2PPD8 638 aa16.37■□□□□ 0.21
VPS33B-202ENST00000535906 DDX11L8A8MPP1 907 aa16.37■□□□□ 0.21
VPS33B-202ENST00000535906 RTN4Q9NQC3 1192 aaKnown RBP16.37■□□□□ 0.21
VPS33B-202ENST00000535906 PRDM11Q9NQV5 511 aa16.37■□□□□ 0.21
VPS33B-202ENST00000535906 PI4K2BQ8TCG2 481 aa16.36■□□□□ 0.21
VPS33B-202ENST00000535906 SOS2Q07890 1332 aaPredicted RBP16.36■□□□□ 0.21
VPS33B-202ENST00000535906 GRM8O00222 908 aa16.36■□□□□ 0.21
VPS33B-202ENST00000535906 IGKV5-2P06315 115 aa16.36■□□□□ 0.21
VPS33B-202ENST00000535906 RIC3Q7Z5B4 369 aa16.36■□□□□ 0.21
VPS33B-202ENST00000535906 TTC5Q8N0Z6 440 aa16.36■□□□□ 0.21
VPS33B-202ENST00000535906 KAZALD1Q96I82 304 aa16.36■□□□□ 0.21
VPS33B-202ENST00000535906 TRAK2O60296 914 aa16.35■□□□□ 0.21
VPS33B-202ENST00000535906 HSP90AB4PQ58FF6 505 aa16.35■□□□□ 0.21
VPS33B-202ENST00000535906 XAGE3Q8WTP9 111 aa16.35■□□□□ 0.21
VPS33B-202ENST00000535906 UTYO14607 1347 aa16.35■□□□□ 0.21
VPS33B-202ENST00000535906 WDR17Q8IZU2 1322 aa16.35■□□□□ 0.21
VPS33B-202ENST00000535906 SNRPA1P09661 255 aaKnown RBP16.35■□□□□ 0.21
VPS33B-202ENST00000535906 PIP4K2AP48426 406 aaPredicted RBP16.35■□□□□ 0.21
VPS33B-202ENST00000535906 COPS6Q7L5N1 327 aa16.35■□□□□ 0.21
VPS33B-202ENST00000535906 LRP10Q7Z4F1 713 aa16.35■□□□□ 0.21
VPS33B-202ENST00000535906 SUCLG2Q96I99 432 aa16.35■□□□□ 0.21
VPS33B-202ENST00000535906 PA2G4Q9UQ80 394 aaKnown RBP16.35■□□□□ 0.21
VPS33B-202ENST00000535906 MAP4K4O95819 1239 aaPredicted RBP16.34■□□□□ 0.21
VPS33B-202ENST00000535906 CABP4P57796 275 aa16.34■□□□□ 0.21
VPS33B-202ENST00000535906 RAB3GAP1Q15042 981 aa16.34■□□□□ 0.21
VPS33B-202ENST00000535906 OS9Q13438 667 aaPredicted RBP16.34■□□□□ 0.21
VPS33B-202ENST00000535906 LARP1Q6PKG0 1096 aaKnown RBP16.34■□□□□ 0.21
VPS33B-202ENST00000535906 TOM1L2Q6ZVM7 507 aa16.34■□□□□ 0.21
VPS33B-202ENST00000535906 TNPO1Q92973 898 aaKnown RBP16.34■□□□□ 0.21
VPS33B-202ENST00000535906 FMNL2Q96PY5 1086 aa16.34■□□□□ 0.21
VPS33B-202ENST00000535906 IL25Q9H293 177 aa16.33■□□□□ 0.2
VPS33B-202ENST00000535906 BICC1Q9H694 974 aaKnown RBP16.33■□□□□ 0.2
VPS33B-202ENST00000535906 HDAC5Q9UQL6 1122 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms