RNA–Protein interactions for RNA: ENST00000535318.6

CPNE2-202, Transcript of copine 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE2, Length 2,316 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE2-202ENST00000535318 LMBRD1Q9NUN5 540 aa27.64■■■□□ 2.02
CPNE2-202ENST00000535318 ANXA1P04083 346 aa27.64■■■□□ 2.02
CPNE2-202ENST00000535318 TMX3Q96JJ7 454 aa27.64■■■□□ 2.02
CPNE2-202ENST00000535318 PLEKHG5O94827 1062 aa27.63■■■□□ 2.01
CPNE2-202ENST00000535318 POLA2Q14181 598 aa27.63■■■□□ 2.01
CPNE2-202ENST00000535318 MST1RQ04912 1400 aa27.63■■■□□ 2.01
CPNE2-202ENST00000535318 PI4KAP2A4QPH2 592 aa27.63■■■□□ 2.01
CPNE2-202ENST00000535318 KRT28Q7Z3Y7 464 aa27.63■■■□□ 2.01
CPNE2-202ENST00000535318 PI4KAP1Q8N8J0 262 aa27.63■■■□□ 2.01
CPNE2-202ENST00000535318 SLIT3O75094 1523 aa27.62■■■□□ 2.01
CPNE2-202ENST00000535318 PHRF1Q9P1Y6 1649 aaKnown RBP27.62■■■□□ 2.01
CPNE2-202ENST00000535318 MPRIPQ6WCQ1 1025 aa27.62■■■□□ 2.01
CPNE2-202ENST00000535318 IL25Q9H293 177 aa27.62■■■□□ 2.01
CPNE2-202ENST00000535318 MED1Q15648 1581 aaPredicted RBP27.62■■■□□ 2.01
CPNE2-202ENST00000535318 RGPD2P0DJD1 1756 aa27.62■■■□□ 2.01
CPNE2-202ENST00000535318 MCCP23508 829 aa27.62■■■□□ 2.01
CPNE2-202ENST00000535318 ZNF530Q6P9A1 599 aaPredicted RBP27.62■■■□□ 2.01
CPNE2-202ENST00000535318 SRGAP3O43295 1099 aa27.61■■■□□ 2.01
CPNE2-202ENST00000535318 BEND3Q5T5X7 828 aa27.61■■■□□ 2.01
CPNE2-202ENST00000535318 MAP4K4O95819 1239 aaPredicted RBP27.61■■■□□ 2.01
CPNE2-202ENST00000535318 GCP02774 474 aa27.61■■■□□ 2.01
CPNE2-202ENST00000535318 ATF3P18847 181 aa27.61■■■□□ 2.01
CPNE2-202ENST00000535318 DNAAF4Q8WXU2 420 aa27.61■■■□□ 2.01
CPNE2-202ENST00000535318 CHAMP1Q96JM3 812 aa27.61■■■□□ 2.01
CPNE2-202ENST00000535318 AOX1Q06278 1338 aa27.6■■■□□ 2.01
CPNE2-202ENST00000535318 RAB11FIP3O75154 756 aa27.6■■■□□ 2.01
CPNE2-202ENST00000535318 TEFQ10587 303 aa27.6■■■□□ 2.01
CPNE2-202ENST00000535318 RHPN1Q8TCX5 695 aa27.6■■■□□ 2.01
CPNE2-202ENST00000535318 KDM4FA0A1W2PPD8 638 aa27.59■■■□□ 2.01
CPNE2-202ENST00000535318 BTBD11A6QL63 1104 aa27.59■■■□□ 2.01
CPNE2-202ENST00000535318 HOXB7P09629 217 aa27.59■■■□□ 2.01
CPNE2-202ENST00000535318 NCLP19338 710 aaKnown RBP27.59■■■□□ 2.01
CPNE2-202ENST00000535318 DCCP43146 1447 aa27.59■■■□□ 2.01
CPNE2-202ENST00000535318 LMOD2Q6P5Q4 547 aa27.59■■■□□ 2.01
CPNE2-202ENST00000535318 AKAP4Q5JQC9 854 aa27.58■■■□□ 2.01
CPNE2-202ENST00000535318 NOL8Q76FK4 1167 aaKnown RBP27.58■■■□□ 2.01
CPNE2-202ENST00000535318 ANAPC15P60006 121 aa27.58■■■□□ 2.01
CPNE2-202ENST00000535318 KDM3BQ7LBC6 1761 aa27.58■■■□□ 2.01
CPNE2-202ENST00000535318 PRPF40AO75400 957 aaKnown RBP27.57■■■□□ 2
CPNE2-202ENST00000535318 FOXD4L5Q5VV16 416 aaPredicted RBP27.57■■■□□ 2
CPNE2-202ENST00000535318 CAVIN1Q6NZI2 390 aaKnown RBP27.57■■■□□ 2
CPNE2-202ENST00000535318 FOXD4L4Q8WXT5 416 aaPredicted RBP27.57■■■□□ 2
CPNE2-202ENST00000535318 ARHGEF25Q86VW2 580 aa27.57■■■□□ 2
CPNE2-202ENST00000535318 PI4K2BQ8TCG2 481 aa27.57■■■□□ 2
CPNE2-202ENST00000535318 MCM2P49736 904 aa27.56■■■□□ 2
CPNE2-202ENST00000535318 PLEKHO1Q53GL0 409 aaPredicted RBP27.56■■■□□ 2
CPNE2-202ENST00000535318 LMTK3Q96Q04 1460 aa27.56■■■□□ 2
CPNE2-202ENST00000535318 UPF3BQ9BZI7 483 aaKnown RBP27.55■■■□□ 2
CPNE2-202ENST00000535318 ADCY9O60503 1353 aa27.55■■■□□ 2
CPNE2-202ENST00000535318 CUL4AQ13619 759 aa27.55■■■□□ 2
CPNE2-202ENST00000535318 KIF1BPQ96EK5 621 aa27.55■■■□□ 2
CPNE2-202ENST00000535318 ALS2Q96Q42 1657 aa27.53■■■□□ 2
CPNE2-202ENST00000535318 RNMTO43148 476 aaKnown RBP27.53■■■□□ 2
CPNE2-202ENST00000535318 GPT2Q8TD30 523 aa27.53■■■□□ 2
CPNE2-202ENST00000535318 LMO7Q8WWI1 1683 aa27.53■■■□□ 2
CPNE2-202ENST00000535318 ZSCAN23Q3MJ62 389 aa27.52■■■□□ 2
CPNE2-202ENST00000535318 DDX17Q92841 729 aaKnown RBP27.52■■■□□ 2
CPNE2-202ENST00000535318 IL17RAQ96F46 866 aa27.52■■■□□ 2
CPNE2-202ENST00000535318 PXDNQ92626 1479 aa27.52■■■□□ 2
CPNE2-202ENST00000535318 CLCN1P35523 988 aa27.51■■□□□ 1.99
CPNE2-202ENST00000535318 NASPP49321 788 aaPredicted RBP27.51■■□□□ 1.99
CPNE2-202ENST00000535318 ZNF445P59923 1031 aa27.51■■□□□ 1.99
CPNE2-202ENST00000535318 PROSER3Q2NL68 480 aa27.51■■□□□ 1.99
CPNE2-202ENST00000535318 CADPS2Q86UW7 1296 aa27.51■■□□□ 1.99
CPNE2-202ENST00000535318 CHMP4AQ9BY43 222 aa27.51■■□□□ 1.99
CPNE2-202ENST00000535318 STRCQ7RTU9 1775 aa27.51■■□□□ 1.99
CPNE2-202ENST00000535318 ERBB4Q15303 1308 aa27.5■■□□□ 1.99
CPNE2-202ENST00000535318 AMOTQ4VCS5 1084 aa27.5■■□□□ 1.99
CPNE2-202ENST00000535318 DBF4Q9UBU7 674 aaPredicted RBP27.5■■□□□ 1.99
CPNE2-202ENST00000535318 HSPA4P34932 840 aa27.5■■□□□ 1.99
CPNE2-202ENST00000535318 C1orf141Q5JVX7 400 aa27.5■■□□□ 1.99
CPNE2-202ENST00000535318 RBM27Q9P2N5 1060 aaKnown RBP27.5■■□□□ 1.99
CPNE2-202ENST00000535318 PRAMEF22A3QJZ6 481 aa27.49■■□□□ 1.99
CPNE2-202ENST00000535318 BRD1O95696 1058 aa27.49■■□□□ 1.99
CPNE2-202ENST00000535318 ANKRD24Q8TF21 1146 aa27.49■■□□□ 1.99
CPNE2-202ENST00000535318 MAP3K2Q9Y2U5 619 aa27.49■■□□□ 1.99
CPNE2-202ENST00000535318 SGSM2O43147 1006 aa27.48■■□□□ 1.99
CPNE2-202ENST00000535318 XIRP1Q702N8 1843 aaKnown RBP27.48■■□□□ 1.99
CPNE2-202ENST00000535318 ESPNB1AK53 854 aa27.47■■□□□ 1.99
CPNE2-202ENST00000535318 GIGYF1O75420 1035 aaPredicted RBP27.47■■□□□ 1.99
CPNE2-202ENST00000535318 TRIM44Q96DX7 344 aaPredicted RBP27.47■■□□□ 1.99
CPNE2-202ENST00000535318 INTS4Q96HW7 963 aaKnown RBP27.47■■□□□ 1.99
CPNE2-202ENST00000535318 OS9Q13438 667 aaPredicted RBP27.46■■□□□ 1.99
CPNE2-202ENST00000535318 NSFL1CQ9UNZ2 370 aaKnown RBP27.46■■□□□ 1.99
CPNE2-202ENST00000535318 AXIN2Q9Y2T1 843 aa27.46■■□□□ 1.99
CPNE2-202ENST00000535318 EPB41L2O43491 1005 aaKnown RBP27.45■■□□□ 1.99
CPNE2-202ENST00000535318 HSP90AB4PQ58FF6 505 aa27.45■■□□□ 1.99
CPNE2-202ENST00000535318 CNTROBQ8N137 903 aa27.45■■□□□ 1.99
CPNE2-202ENST00000535318 C9orf78Q9NZ63 289 aaPredicted RBP27.45■■□□□ 1.98
CPNE2-202ENST00000535318 RAD50Q92878 1312 aa27.45■■□□□ 1.98
CPNE2-202ENST00000535318 CWF19L2Q2TBE0 894 aaKnown RBP27.44■■□□□ 1.98
CPNE2-202ENST00000535318 NCAPD2Q15021 1401 aa27.44■■□□□ 1.98
CPNE2-202ENST00000535318 MTX1Q13505 466 aa27.44■■□□□ 1.98
CPNE2-202ENST00000535318 LSG1Q9H089 658 aaKnown RBP27.44■■□□□ 1.98
CPNE2-202ENST00000535318 CWC27Q6UX04 472 aaKnown RBP27.43■■□□□ 1.98
CPNE2-202ENST00000535318 KSR2Q6VAB6 950 aa27.43■■□□□ 1.98
CPNE2-202ENST00000535318 PA2G4Q9UQ80 394 aaKnown RBP27.43■■□□□ 1.98
CPNE2-202ENST00000535318 NPHP3Q7Z494 1330 aa27.43■■□□□ 1.98
CPNE2-202ENST00000535318 CCDC173Q0VFZ6 552 aa27.42■■□□□ 1.98
CPNE2-202ENST00000535318 PPP1R9BQ96SB3 815 aa27.42■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms