RNA–Protein interactions for RNA: ENST00000535140.1

OTUB1-205, Transcript of OTU deubiquitinase, ubiquitin aldehyde binding 1, humanhuman

TSL 3

Gene OTUB1, Length 638 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUB1-205ENST00000535140 COL3A1P02461 1466 aaPredicted RBP24.95■■□□□ 1.58
OTUB1-205ENST00000535140 CEP350Q5VT06 3117 aa24.94■■□□□ 1.58
OTUB1-205ENST00000535140 C9orf131Q5VYM1 1079 aa24.94■■□□□ 1.58
OTUB1-205ENST00000535140 UBR2Q8IWV8 1755 aa24.94■■□□□ 1.58
OTUB1-205ENST00000535140 U2SURPO15042 1029 aaKnown RBP24.93■■□□□ 1.58
OTUB1-205ENST00000535140 NMRK2Q9NPI5 230 aa24.93■■□□□ 1.58
OTUB1-205ENST00000535140 AFDNP55196 1824 aaKnown RBP24.92■■□□□ 1.58
OTUB1-205ENST00000535140 NARFQ9UHQ1 456 aa24.92■■□□□ 1.58
OTUB1-205ENST00000535140 NFIXQ14938 502 aa24.91■■□□□ 1.58
OTUB1-205ENST00000535140 CANXP27824 592 aaKnown RBP24.9■■□□□ 1.58
OTUB1-205ENST00000535140 TTC5Q8N0Z6 440 aa24.9■■□□□ 1.58
OTUB1-205ENST00000535140 VSIG10Q8N0Z9 540 aa24.9■■□□□ 1.58
OTUB1-205ENST00000535140 BCL2L12Q9HB09 334 aa24.89■■□□□ 1.58
OTUB1-205ENST00000535140 NPC1L1Q9UHC9 1359 aa24.89■■□□□ 1.57
OTUB1-205ENST00000535140 TOMM70O94826 608 aa24.88■■□□□ 1.57
OTUB1-205ENST00000535140 RNF181Q9P0P0 153 aa24.88■■□□□ 1.57
OTUB1-205ENST00000535140 NRXN2Q9P2S2 1712 aa24.88■■□□□ 1.57
OTUB1-205ENST00000535140 TEFQ10587 303 aa24.87■■□□□ 1.57
OTUB1-205ENST00000535140 GNAT3A8MTJ3 354 aa24.85■■□□□ 1.57
OTUB1-205ENST00000535140 SERPINB2P05120 415 aa24.85■■□□□ 1.57
OTUB1-205ENST00000535140 IL17REQ8NFR9 667 aa24.85■■□□□ 1.57
OTUB1-205ENST00000535140 GAS2L2Q8NHY3 880 aa24.85■■□□□ 1.57
OTUB1-205ENST00000535140 ZNF496Q96IT1 587 aaPredicted RBP24.85■■□□□ 1.57
OTUB1-205ENST00000535140 CARMIL3Q8ND23 1372 aa24.84■■□□□ 1.57
OTUB1-205ENST00000535140 STARD3NLO95772 234 aa24.84■■□□□ 1.57
OTUB1-205ENST00000535140 BICDL1Q6ZP65 573 aa24.84■■□□□ 1.57
OTUB1-205ENST00000535140 ZNF330Q9Y3S2 320 aaPredicted RBP24.84■■□□□ 1.57
OTUB1-205ENST00000535140 SIPA1L3O60292 1781 aaPredicted RBP24.84■■□□□ 1.57
OTUB1-205ENST00000535140 DLEC1Q9Y238 1755 aa24.84■■□□□ 1.57
OTUB1-205ENST00000535140 SBF1O95248 1867 aa24.83■■□□□ 1.57
OTUB1-205ENST00000535140 RASSF7Q02833 373 aa24.83■■□□□ 1.57
OTUB1-205ENST00000535140 HEG1Q9ULI3 1381 aa24.82■■□□□ 1.56
OTUB1-205ENST00000535140 APLP1P51693 650 aa24.82■■□□□ 1.56
OTUB1-205ENST00000535140 EIF5P55010 431 aaKnown RBP24.82■■□□□ 1.56
OTUB1-205ENST00000535140 ZNF790Q6PG37 636 aa24.82■■□□□ 1.56
OTUB1-205ENST00000535140 C16orf71Q8IYS4 520 aaPredicted RBP24.81■■□□□ 1.56
OTUB1-205ENST00000535140 SCN7AQ01118 1682 aa24.81■■□□□ 1.56
OTUB1-205ENST00000535140 KDM2BQ8NHM5 1336 aa24.81■■□□□ 1.56
OTUB1-205ENST00000535140 C2CD5Q86YS7 1000 aa24.8■■□□□ 1.56
OTUB1-205ENST00000535140 A0A087WZG4 1122 aa24.79■■□□□ 1.56
OTUB1-205ENST00000535140 PRKAR2BP31323 418 aa24.79■■□□□ 1.56
OTUB1-205ENST00000535140 TBC1D9BQ66K14 1250 aa24.78■■□□□ 1.56
OTUB1-205ENST00000535140 RBM46Q8TBY0 533 aaKnown RBP24.78■■□□□ 1.56
OTUB1-205ENST00000535140 PHACTR3Q96KR7 559 aa24.78■■□□□ 1.56
OTUB1-205ENST00000535140 TBC1D2BQ9UPU7 963 aa24.78■■□□□ 1.56
OTUB1-205ENST00000535140 TNRC6CQ9HCJ0 1690 aaKnown RBP24.78■■□□□ 1.56
OTUB1-205ENST00000535140 IFFO2Q5TF58 517 aa24.77■■□□□ 1.56
OTUB1-205ENST00000535140 TTLL6Q8N841 843 aa24.77■■□□□ 1.56
OTUB1-205ENST00000535140 CFAP53Q96M91 514 aa24.77■■□□□ 1.56
OTUB1-205ENST00000535140 FMNL2Q96PY5 1086 aa24.77■■□□□ 1.56
OTUB1-205ENST00000535140 TEX13AQ9BXU3 409 aaPredicted RBP24.77■■□□□ 1.56
OTUB1-205ENST00000535140 CEMIPQ8WUJ3 1361 aa24.77■■□□□ 1.56
OTUB1-205ENST00000535140 H0YIN7 160 aa24.76■■□□□ 1.55
OTUB1-205ENST00000535140 RSPH6AQ9H0K4 717 aa24.76■■□□□ 1.55
OTUB1-205ENST00000535140 RRAGCQ9HB90 399 aa24.76■■□□□ 1.55
OTUB1-205ENST00000535140 ANKRD31Q8N7Z5 1873 aa24.76■■□□□ 1.55
OTUB1-205ENST00000535140 WDR90Q96KV7 1748 aa24.75■■□□□ 1.55
OTUB1-205ENST00000535140 KCNQ3O43525 872 aa24.75■■□□□ 1.55
OTUB1-205ENST00000535140 CCDC24Q8N4L8 307 aa24.75■■□□□ 1.55
OTUB1-205ENST00000535140 BTBD11A6QL63 1104 aa24.74■■□□□ 1.55
OTUB1-205ENST00000535140 A1BGP04217 495 aa24.74■■□□□ 1.55
OTUB1-205ENST00000535140 IL6STP40189 918 aaPredicted RBP24.74■■□□□ 1.55
OTUB1-205ENST00000535140 PRELPP51888 382 aa24.74■■□□□ 1.55
OTUB1-205ENST00000535140 COL11A2P13942 1736 aaPredicted RBP24.73■■□□□ 1.55
OTUB1-205ENST00000535140 TIAM2Q8IVF5 1701 aa24.73■■□□□ 1.55
OTUB1-205ENST00000535140 LMNB1P20700 586 aa24.73■■□□□ 1.55
OTUB1-205ENST00000535140 PRR5LQ6MZQ0 368 aa24.72■■□□□ 1.55
OTUB1-205ENST00000535140 NPM2Q86SE8 214 aaKnown RBP24.72■■□□□ 1.55
OTUB1-205ENST00000535140 ZC3H4Q9UPT8 1303 aaKnown RBP24.71■■□□□ 1.55
OTUB1-205ENST00000535140 HTRA3P83110 453 aa24.71■■□□□ 1.55
OTUB1-205ENST00000535140 DNAJC5GQ8N7S2 189 aa24.71■■□□□ 1.55
OTUB1-205ENST00000535140 ZNF622Q969S3 477 aaKnown RBP eCLIP24.71■■□□□ 1.554e-7■■□□□ 11.5
OTUB1-205ENST00000535140 ZNF219Q9P2Y4 722 aaPredicted RBP24.71■■□□□ 1.55
OTUB1-205ENST00000535140 NUDCQ9Y266 331 aa24.71■■□□□ 1.55
OTUB1-205ENST00000535140 NFKBIEO00221 500 aa24.7■■□□□ 1.54
OTUB1-205ENST00000535140 U2AF1L5P0DN76 240 aaPredicted RBP24.7■■□□□ 1.54
OTUB1-205ENST00000535140 PIP4K2AP48426 406 aaPredicted RBP24.7■■□□□ 1.54
OTUB1-205ENST00000535140 U2AF1Q01081 240 aaKnown RBP eCLIP24.7■■□□□ 1.54
OTUB1-205ENST00000535140 FSTL1Q12841 308 aa24.7■■□□□ 1.54
OTUB1-205ENST00000535140 CCDC88AQ3V6T2 1871 aa24.7■■□□□ 1.54
OTUB1-205ENST00000535140 BCORQ6W2J9 1755 aa24.7■■□□□ 1.54
OTUB1-205ENST00000535140 CAMTA2O94983 1202 aa24.69■■□□□ 1.54
OTUB1-205ENST00000535140 PPP2R1AP30153 589 aa24.69■■□□□ 1.54
OTUB1-205ENST00000535140 MCM10Q7L590 875 aa24.69■■□□□ 1.54
OTUB1-205ENST00000535140 BRIP1Q9BX63 1249 aa24.69■■□□□ 1.54
OTUB1-205ENST00000535140 PRAMEF22A3QJZ6 481 aa24.68■■□□□ 1.54
OTUB1-205ENST00000535140 NPHP1O15259 732 aa24.68■■□□□ 1.54
OTUB1-205ENST00000535140 PDE6BP35913 854 aa24.68■■□□□ 1.54
OTUB1-205ENST00000535140 USP16Q9Y5T5 823 aa24.68■■□□□ 1.54
OTUB1-205ENST00000535140 DZIP3Q86Y13 1208 aaKnown RBP24.67■■□□□ 1.54
OTUB1-205ENST00000535140 CNBD1Q8NA66 436 aa24.67■■□□□ 1.54
OTUB1-205ENST00000535140 RTF1Q92541 710 aaKnown RBP24.67■■□□□ 1.54
OTUB1-205ENST00000535140 SETDB2Q96T68 719 aa24.67■■□□□ 1.54
OTUB1-205ENST00000535140 GLTPD2A6NH11 291 aa24.66■■□□□ 1.54
OTUB1-205ENST00000535140 C21orf2O43822 256 aa24.66■■□□□ 1.54
OTUB1-205ENST00000535140 DCTN1Q14203 1278 aa24.65■■□□□ 1.54
OTUB1-205ENST00000535140 CACNA1SQ13698 1873 aa24.64■■□□□ 1.54
OTUB1-205ENST00000535140 SMC1BQ8NDV3 1235 aa24.64■■□□□ 1.54
OTUB1-205ENST00000535140 PDZRN3Q9UPQ7 1066 aa24.64■■□□□ 1.54
OTUB1-205ENST00000535140 FER1L6Q2WGJ9 1857 aa24.62■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms