RNA–Protein interactions for RNA: ENST00000534553.5

BEST1-208, Transcript of bestrophin 1, humanhuman

TSL 2 BASIC

Gene BEST1, Length 1,829 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-208ENST00000534553 ADCY9O60503 1353 aa16.64■□□□□ 0.25
BEST1-208ENST00000534553 LARP1Q6PKG0 1096 aaKnown RBP16.63■□□□□ 0.25
BEST1-208ENST00000534553 STRN4Q9NRL3 753 aa16.63■□□□□ 0.25
BEST1-208ENST00000534553 DAXXQ9UER7 740 aaPredicted RBP16.63■□□□□ 0.25
BEST1-208ENST00000534553 ANP32EQ9BTT0 268 aa16.62■□□□□ 0.25
BEST1-208ENST00000534553 SLC39A6Q13433 755 aa16.61■□□□□ 0.25
BEST1-208ENST00000534553 ZNF496Q96IT1 587 aaPredicted RBP16.61■□□□□ 0.25
BEST1-208ENST00000534553 TBC1D32Q96NH3 1257 aa16.61■□□□□ 0.25
BEST1-208ENST00000534553 LRRFIP2Q9Y608 721 aaKnown RBP16.61■□□□□ 0.25
BEST1-208ENST00000534553 PLEKHM2Q8IWE5 1019 aa16.61■□□□□ 0.25
BEST1-208ENST00000534553 LINS1Q8NG48 757 aa16.61■□□□□ 0.25
BEST1-208ENST00000534553 BTG4Q9NY30 223 aa16.61■□□□□ 0.25
BEST1-208ENST00000534553 MAP3K2Q9Y2U5 619 aa16.61■□□□□ 0.25
BEST1-208ENST00000534553 LAMB4A4D0S4 1761 aa16.6■□□□□ 0.25
BEST1-208ENST00000534553 PDIA6Q15084 440 aa16.6■□□□□ 0.25
BEST1-208ENST00000534553 SSH3Q8TE77 659 aa16.6■□□□□ 0.25
BEST1-208ENST00000534553 C5P01031 1676 aa16.6■□□□□ 0.25
BEST1-208ENST00000534553 RAB11FIP3O75154 756 aa16.59■□□□□ 0.25
BEST1-208ENST00000534553 SEC24BO95487 1268 aa16.59■□□□□ 0.25
BEST1-208ENST00000534553 LRRCC1Q9C099 1032 aa16.59■□□□□ 0.25
BEST1-208ENST00000534553 PLCH1Q4KWH8 1693 aa16.59■□□□□ 0.25
BEST1-208ENST00000534553 NEXNQ0ZGT2 675 aa16.59■□□□□ 0.25
BEST1-208ENST00000534553 MTX1Q13505 466 aa16.59■□□□□ 0.25
BEST1-208ENST00000534553 HSP90AB4PQ58FF6 505 aa16.59■□□□□ 0.25
BEST1-208ENST00000534553 OSBPL3Q9H4L5 887 aa16.59■□□□□ 0.25
BEST1-208ENST00000534553 PAPPAQ13219 1627 aa16.58■□□□□ 0.25
BEST1-208ENST00000534553 SHANK3Q9BYB0 1731 aa16.58■□□□□ 0.24
BEST1-208ENST00000534553 ANXA1P04083 346 aa16.58■□□□□ 0.24
BEST1-208ENST00000534553 BECN1Q14457 450 aa16.58■□□□□ 0.24
BEST1-208ENST00000534553 PROSER3Q2NL68 480 aa16.58■□□□□ 0.24
BEST1-208ENST00000534553 TTC22Q5TAA0 569 aa16.58■□□□□ 0.24
BEST1-208ENST00000534553 CDCA7Q9BWT1 371 aaPredicted RBP16.58■□□□□ 0.24
BEST1-208ENST00000534553 DISP2A7MBM2 1401 aa16.58■□□□□ 0.24
BEST1-208ENST00000534553 UBR2Q8IWV8 1755 aa16.58■□□□□ 0.24
BEST1-208ENST00000534553 PRAMEF22A3QJZ6 481 aa16.57■□□□□ 0.24
BEST1-208ENST00000534553 TOM1O60784 492 aa16.57■□□□□ 0.24
BEST1-208ENST00000534553 CDC45O75419 566 aa16.57■□□□□ 0.24
BEST1-208ENST00000534553 POLA2Q14181 598 aa16.57■□□□□ 0.24
BEST1-208ENST00000534553 C9orf78Q9NZ63 289 aaPredicted RBP16.57■□□□□ 0.24
BEST1-208ENST00000534553 UTYO14607 1347 aa16.57■□□□□ 0.24
BEST1-208ENST00000534553 TNS2Q63HR2 1409 aa16.57■□□□□ 0.24
BEST1-208ENST00000534553 COL16A1Q07092 1604 aaPredicted RBP16.57■□□□□ 0.24
BEST1-208ENST00000534553 GLI3P10071 1580 aa16.57■□□□□ 0.24
BEST1-208ENST00000534553 PNMA6EA0A0J9YXQ4 647 aa16.56■□□□□ 0.24
BEST1-208ENST00000534553 RIC3Q7Z5B4 369 aa16.56■□□□□ 0.24
BEST1-208ENST00000534553 LRP6O75581 1613 aa16.55■□□□□ 0.24
BEST1-208ENST00000534553 NBPF7P0C2Y1 421 aaPredicted RBP16.55■□□□□ 0.24
BEST1-208ENST00000534553 CASC1Q6TDU7 716 aa16.55■□□□□ 0.24
BEST1-208ENST00000534553 C22orf23Q9BZE7 217 aa16.55■□□□□ 0.24
BEST1-208ENST00000534553 PHLPP1O60346 1717 aa16.55■□□□□ 0.24
BEST1-208ENST00000534553 AOX1Q06278 1338 aa16.54■□□□□ 0.24
BEST1-208ENST00000534553 GRM8O00222 908 aa16.54■□□□□ 0.24
BEST1-208ENST00000534553 PPP1R42Q7Z4L9 355 aa16.54■□□□□ 0.24
BEST1-208ENST00000534553 DDX54Q8TDD1 881 aaKnown RBP16.54■□□□□ 0.24
BEST1-208ENST00000534553 THRAP3Q9Y2W1 955 aaKnown RBP16.54■□□□□ 0.24
BEST1-208ENST00000534553 USP16Q9Y5T5 823 aa16.54■□□□□ 0.24
BEST1-208ENST00000534553 SRGAP3O43295 1099 aa16.54■□□□□ 0.24
BEST1-208ENST00000534553 MFAP1P55081 439 aaKnown RBP16.54■□□□□ 0.24
BEST1-208ENST00000534553 LRP10Q7Z4F1 713 aa16.54■□□□□ 0.24
BEST1-208ENST00000534553 XAGE3Q8WTP9 111 aa16.54■□□□□ 0.24
BEST1-208ENST00000534553 METTL22Q9BUU2 404 aaPredicted RBP16.54■□□□□ 0.24
BEST1-208ENST00000534553 TEX13AQ9BXU3 409 aaPredicted RBP16.54■□□□□ 0.24
BEST1-208ENST00000534553 TMOD3Q9NYL9 352 aa16.54■□□□□ 0.24
BEST1-208ENST00000534553 EXOC6BQ9Y2D4 811 aa16.54■□□□□ 0.24
BEST1-208ENST00000534553 KCPQ6ZWJ8 1503 aa16.54■□□□□ 0.24
BEST1-208ENST00000534553 MYL6BP14649 208 aa16.53■□□□□ 0.24
BEST1-208ENST00000534553 GSPT1P15170 499 aaKnown RBP16.53■□□□□ 0.24
BEST1-208ENST00000534553 RBM25P49756 843 aaKnown RBP16.53■□□□□ 0.24
BEST1-208ENST00000534553 ANKRD13DQ6ZTN6 518 aa16.53■□□□□ 0.24
BEST1-208ENST00000534553 COPS6Q7L5N1 327 aa16.53■□□□□ 0.24
BEST1-208ENST00000534553 VSIG10Q8N0Z9 540 aa16.53■□□□□ 0.24
BEST1-208ENST00000534553 AIMP1Q12904 312 aaKnown RBP16.52■□□□□ 0.24
BEST1-208ENST00000534553 KIF1BPQ96EK5 621 aa16.52■□□□□ 0.24
BEST1-208ENST00000534553 COL15A1P39059 1388 aa16.52■□□□□ 0.24
BEST1-208ENST00000534553 PDE1AP54750 535 aa16.52■□□□□ 0.23
BEST1-208ENST00000534553 TBC1D9Q6ZT07 1266 aa16.52■□□□□ 0.23
BEST1-208ENST00000534553 ERC1Q8IUD2 1116 aa16.52■□□□□ 0.23
BEST1-208ENST00000534553 SALL3Q9BXA9 1300 aa16.51■□□□□ 0.23
BEST1-208ENST00000534553 SMARCA5O60264 1052 aaPredicted RBP16.51■□□□□ 0.23
BEST1-208ENST00000534553 PLBD2Q8NHP8 589 aa16.51■□□□□ 0.23
BEST1-208ENST00000534553 STAP2Q9UGK3 403 aa16.51■□□□□ 0.23
BEST1-208ENST00000534553 NEURL1BA8MQ27 555 aa16.5■□□□□ 0.23
BEST1-208ENST00000534553 APBB1O00213 710 aa16.5■□□□□ 0.23
BEST1-208ENST00000534553 EXOC5O00471 708 aa16.5■□□□□ 0.23
BEST1-208ENST00000534553 SURF6O75683 361 aaKnown RBP16.5■□□□□ 0.23
BEST1-208ENST00000534553 C16orf71Q8IYS4 520 aaPredicted RBP16.5■□□□□ 0.23
BEST1-208ENST00000534553 USP35Q9P2H5 1018 aa16.5■□□□□ 0.23
BEST1-208ENST00000534553 MX1P20591 662 aa16.49■□□□□ 0.23
BEST1-208ENST00000534553 CWF19L2Q2TBE0 894 aaKnown RBP16.49■□□□□ 0.23
BEST1-208ENST00000534553 WNK3Q9BYP7 1800 aa16.49■□□□□ 0.23
BEST1-208ENST00000534553 TOGARAM1Q9Y4F4 1720 aa16.49■□□□□ 0.23
BEST1-208ENST00000534553 GCKRQ14397 625 aa16.49■□□□□ 0.23
BEST1-208ENST00000534553 IGKV5-2P06315 115 aa16.48■□□□□ 0.23
BEST1-208ENST00000534553 RHPN1Q8TCX5 695 aa16.48■□□□□ 0.23
BEST1-208ENST00000534553 NWD2Q9ULI1 1742 aa16.48■□□□□ 0.23
BEST1-208ENST00000534553 SDSP20132 328 aa16.47■□□□□ 0.23
BEST1-208ENST00000534553 OTUD7AQ8TE49 926 aaPredicted RBP16.47■□□□□ 0.23
BEST1-208ENST00000534553 MYD88Q99836 296 aa16.47■□□□□ 0.23
BEST1-208ENST00000534553 NRAPQ86VF7 1730 aa16.47■□□□□ 0.23
BEST1-208ENST00000534553 ARFGEF2Q9Y6D5 1785 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms