RNA–Protein interactions for RNA: ENST00000534062.1

RTL1-201, Transcript of retrotransposon Gag like 1, humanhuman

APPRIS P1 BASIC

Gene RTL1, Length 4,193 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTL1-201ENST00000534062 PI4KAP2A4QPH2 592 aa11.98□□□□□ -0.49
RTL1-201ENST00000534062 PI4KAP1Q8N8J0 262 aa11.98□□□□□ -0.49
RTL1-201ENST00000534062 ABCA3Q99758 1704 aa11.98□□□□□ -0.49
RTL1-201ENST00000534062 CDCA7Q9BWT1 371 aaPredicted RBP11.98□□□□□ -0.49
RTL1-201ENST00000534062 IGHDP01880 384 aa11.98□□□□□ -0.49
RTL1-201ENST00000534062 SPATA31A5Q5VU36 1347 aa11.98□□□□□ -0.49
RTL1-201ENST00000534062 SPATA31A7Q8IWB4 1347 aa11.98□□□□□ -0.49
RTL1-201ENST00000534062 A0A0U1RQG5 324 aaPredicted RBP11.97□□□□□ -0.49
RTL1-201ENST00000534062 LMO7Q8WWI1 1683 aa11.97□□□□□ -0.49
RTL1-201ENST00000534062 ABCC6O95255 1503 aa11.97□□□□□ -0.49
RTL1-201ENST00000534062 COL14A1Q05707 1796 aaKnown RBP11.97□□□□□ -0.49
RTL1-201ENST00000534062 DDX58O95786 925 aaKnown RBP11.97□□□□□ -0.49
RTL1-201ENST00000534062 PIGBQ92521 554 aa11.97□□□□□ -0.49
RTL1-201ENST00000534062 MEIS3Q99687 375 aa11.96□□□□□ -0.49
RTL1-201ENST00000534062 THRAP3Q9Y2W1 955 aaKnown RBP11.96□□□□□ -0.5
RTL1-201ENST00000534062 HOXB7P09629 217 aa11.96□□□□□ -0.5
RTL1-201ENST00000534062 CCT4P50991 539 aaKnown RBP11.96□□□□□ -0.5
RTL1-201ENST00000534062 FAM208AQ9UK61 1670 aaKnown RBP11.96□□□□□ -0.5
RTL1-201ENST00000534062 A1BGP04217 495 aa11.95□□□□□ -0.5
RTL1-201ENST00000534062 BRPF1P55201 1214 aaPredicted RBP11.95□□□□□ -0.5
RTL1-201ENST00000534062 COPS6Q7L5N1 327 aa11.95□□□□□ -0.5
RTL1-201ENST00000534062 XAGE3Q8WTP9 111 aa11.95□□□□□ -0.5
RTL1-201ENST00000534062 MAP3K2Q9Y2U5 619 aa11.95□□□□□ -0.5
RTL1-201ENST00000534062 DNAAF4Q8WXU2 420 aa11.95□□□□□ -0.5
RTL1-201ENST00000534062 SRCIN1Q9C0H9 1055 aa11.95□□□□□ -0.5
RTL1-201ENST00000534062 HYPKQ9NX55 129 aa11.95□□□□□ -0.5
RTL1-201ENST00000534062 C9orf78Q9NZ63 289 aaPredicted RBP11.95□□□□□ -0.5
RTL1-201ENST00000534062 QTRT2Q9H974 415 aaKnown RBP11.95□□□□□ -0.5
RTL1-201ENST00000534062 ABCC4O15439 1325 aa11.95□□□□□ -0.5
RTL1-201ENST00000534062 NFKBIBQ15653 356 aa11.94□□□□□ -0.5
RTL1-201ENST00000534062 VPS72Q15906 364 aa11.94□□□□□ -0.5
RTL1-201ENST00000534062 MARCH10Q8NA82 808 aaPredicted RBP11.94□□□□□ -0.5
RTL1-201ENST00000534062 NEXNQ0ZGT2 675 aa11.94□□□□□ -0.5
RTL1-201ENST00000534062 DDX21Q9NR30 783 aaKnown RBP eCLIP11.94□□□□□ -0.5
RTL1-201ENST00000534062 ZBTB40Q9NUA8 1239 aa11.94□□□□□ -0.5
RTL1-201ENST00000534062 ZBTB7BO15156 539 aaPredicted RBP11.94□□□□□ -0.5
RTL1-201ENST00000534062 DNAJC10Q8IXB1 793 aa11.94□□□□□ -0.5
RTL1-201ENST00000534062 RRAGDQ9NQL2 400 aaPredicted RBP11.94□□□□□ -0.5
RTL1-201ENST00000534062 SOS1Q07889 1333 aaPredicted RBP11.94□□□□□ -0.5
RTL1-201ENST00000534062 UBTFL1P0CB47 393 aaPredicted RBP11.93□□□□□ -0.5
RTL1-201ENST00000534062 NKX1-1Q15270 411 aaPredicted RBP11.93□□□□□ -0.5
RTL1-201ENST00000534062 ZBTB3Q9H5J0 574 aa11.93□□□□□ -0.5
RTL1-201ENST00000534062 KCNQ2O43526 872 aa11.93□□□□□ -0.5
RTL1-201ENST00000534062 AAMPQ13685 434 aa11.93□□□□□ -0.5
RTL1-201ENST00000534062 TRPC5Q9UL62 973 aaPredicted RBP11.93□□□□□ -0.5
RTL1-201ENST00000534062 STARD3NLO95772 234 aa11.92□□□□□ -0.5
RTL1-201ENST00000534062 RBM10P98175 930 aaKnown RBP11.92□□□□□ -0.5
RTL1-201ENST00000534062 HSP90AA2PQ14568 343 aaPredicted RBP11.92□□□□□ -0.5
RTL1-201ENST00000534062 CWF19L2Q2TBE0 894 aaKnown RBP11.92□□□□□ -0.5
RTL1-201ENST00000534062 INTS3Q68E01 1043 aaKnown RBP11.92□□□□□ -0.5
RTL1-201ENST00000534062 GJD4Q96KN9 370 aaPredicted RBP11.92□□□□□ -0.5
RTL1-201ENST00000534062 MYD88Q99836 296 aa11.92□□□□□ -0.5
RTL1-201ENST00000534062 ANKRD45Q5TZF3 282 aa11.92□□□□□ -0.5
RTL1-201ENST00000534062 FNBP4Q8N3X1 1017 aaPredicted RBP11.92□□□□□ -0.5
RTL1-201ENST00000534062 ATG3Q9NT62 314 aa11.92□□□□□ -0.5
RTL1-201ENST00000534062 PARP4Q9UKK3 1724 aaKnown RBP11.92□□□□□ -0.5
RTL1-201ENST00000534062 ATP5J2-PTCD1G3V325 749 aa11.91□□□□□ -0.5
RTL1-201ENST00000534062 JARID2Q92833 1246 aaPredicted RBP11.91□□□□□ -0.5
RTL1-201ENST00000534062 HEG1Q9ULI3 1381 aa11.91□□□□□ -0.5
RTL1-201ENST00000534062 KCNQ4P56696 695 aa11.91□□□□□ -0.5
RTL1-201ENST00000534062 COL22A1Q8NFW1 1626 aaPredicted RBP11.91□□□□□ -0.5
RTL1-201ENST00000534062 GNAI2P04899 355 aa11.91□□□□□ -0.5
RTL1-201ENST00000534062 GNAI3P08754 354 aa11.91□□□□□ -0.5
RTL1-201ENST00000534062 ATP6V1AP38606 617 aa11.91□□□□□ -0.5
RTL1-201ENST00000534062 BARGINQ6ZT62 677 aa11.91□□□□□ -0.5
RTL1-201ENST00000534062 ANKRD13DQ6ZTN6 518 aa11.91□□□□□ -0.5
RTL1-201ENST00000534062 LNPKQ9C0E8 428 aa11.91□□□□□ -0.5
RTL1-201ENST00000534062 KSR2Q6VAB6 950 aa11.9□□□□□ -0.5
RTL1-201ENST00000534062 PDZRN3Q9UPQ7 1066 aa11.9□□□□□ -0.5
RTL1-201ENST00000534062 LRP6O75581 1613 aa11.9□□□□□ -0.5
RTL1-201ENST00000534062 LRRFIP2Q9Y608 721 aaKnown RBP11.9□□□□□ -0.5
RTL1-201ENST00000534062 SLIT2O94813 1529 aa11.9□□□□□ -0.5
RTL1-201ENST00000534062 SEPT12Q8IYM1 358 aa11.9□□□□□ -0.5
RTL1-201ENST00000534062 PLCH1Q4KWH8 1693 aa11.9□□□□□ -0.51
RTL1-201ENST00000534062 LRRC37A3O60309 1634 aa11.89□□□□□ -0.51
RTL1-201ENST00000534062 BCL9LQ86UU0 1499 aa11.89□□□□□ -0.51
RTL1-201ENST00000534062 HMMRO75330 724 aa11.89□□□□□ -0.51
RTL1-201ENST00000534062 OS9Q13438 667 aaPredicted RBP11.89□□□□□ -0.51
RTL1-201ENST00000534062 CHMP3Q9Y3E7 222 aa11.89□□□□□ -0.51
RTL1-201ENST00000534062 TNS2Q63HR2 1409 aa11.89□□□□□ -0.51
RTL1-201ENST00000534062 TTLL7Q6ZT98 887 aa11.88□□□□□ -0.51
RTL1-201ENST00000534062 KDM2BQ8NHM5 1336 aa11.88□□□□□ -0.51
RTL1-201ENST00000534062 RRP9O43818 475 aaKnown RBP11.88□□□□□ -0.51
RTL1-201ENST00000534062 HSP90AA1P07900 732 aaKnown RBP11.88□□□□□ -0.51
RTL1-201ENST00000534062 KIF6Q6ZMV9 814 aa11.88□□□□□ -0.51
RTL1-201ENST00000534062 FAM177BA6PVY3 158 aa11.88□□□□□ -0.51
RTL1-201ENST00000534062 SCN11AQ9UI33 1791 aa11.87□□□□□ -0.51
RTL1-201ENST00000534062 TEX13AQ9BXU3 409 aaPredicted RBP11.87□□□□□ -0.51
RTL1-201ENST00000534062 DISP2A7MBM2 1401 aa11.87□□□□□ -0.51
RTL1-201ENST00000534062 NBPF7P0C2Y1 421 aaPredicted RBP11.87□□□□□ -0.51
RTL1-201ENST00000534062 PDE4AP27815 886 aa11.87□□□□□ -0.51
RTL1-201ENST00000534062 FGD1P98174 961 aa11.87□□□□□ -0.51
RTL1-201ENST00000534062 PDIA6Q15084 440 aa11.87□□□□□ -0.51
RTL1-201ENST00000534062 NBPF26B4DH59 902 aa11.86□□□□□ -0.51
RTL1-201ENST00000534062 NBPF14Q5TI25 921 aa11.86□□□□□ -0.51
RTL1-201ENST00000534062 NBPF10Q6P3W6 841 aaKnown RBP11.86□□□□□ -0.51
RTL1-201ENST00000534062 NBPF15Q8N660 670 aa11.86□□□□□ -0.51
RTL1-201ENST00000534062 TBC1D2BQ9UPU7 963 aa11.86□□□□□ -0.51
RTL1-201ENST00000534062 PKD1L3Q7Z443 1732 aa11.86□□□□□ -0.51
RTL1-201ENST00000534062 EXOC6BQ9Y2D4 811 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms