RNA–Protein interactions for RNA: ENST00000533682.1

CLP1-205, Transcript of cleavage and polyadenylation factor I subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLP1, Length 2,435 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLP1-205ENST00000533682 ADAMTS7Q9UKP4 1686 aa14.81□□□□□ -0.04
CLP1-205ENST00000533682 MYL6BP14649 208 aa14.81□□□□□ -0.04
CLP1-205ENST00000533682 PDIA6Q15084 440 aa14.81□□□□□ -0.04
CLP1-205ENST00000533682 CWF19L2Q2TBE0 894 aaKnown RBP14.81□□□□□ -0.04
CLP1-205ENST00000533682 SPRYD3Q8NCJ5 442 aa14.81□□□□□ -0.04
CLP1-205ENST00000533682 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.81□□□□□ -0.04
CLP1-205ENST00000533682 USP35Q9P2H5 1018 aa14.81□□□□□ -0.04
CLP1-205ENST00000533682 USP16Q9Y5T5 823 aa14.81□□□□□ -0.04
CLP1-205ENST00000533682 PPP1R42Q7Z4L9 355 aa14.8□□□□□ -0.04
CLP1-205ENST00000533682 SLKQ9H2G2 1235 aaPredicted RBP14.8□□□□□ -0.04
CLP1-205ENST00000533682 LARP1Q6PKG0 1096 aaKnown RBP14.8□□□□□ -0.04
CLP1-205ENST00000533682 DCAF5Q96JK2 942 aa14.8□□□□□ -0.04
CLP1-205ENST00000533682 WDR17Q8IZU2 1322 aa14.79□□□□□ -0.04
CLP1-205ENST00000533682 SDSP20132 328 aa14.79□□□□□ -0.04
CLP1-205ENST00000533682 PXDNLA1KZ92 1463 aa14.79□□□□□ -0.04
CLP1-205ENST00000533682 N4BP2Q86UW6 1770 aaPredicted RBP14.79□□□□□ -0.04
CLP1-205ENST00000533682 C5P01031 1676 aa14.78□□□□□ -0.04
CLP1-205ENST00000533682 IL1RAPL2Q9NP60 686 aa14.78□□□□□ -0.04
CLP1-205ENST00000533682 SRGAP3O43295 1099 aa14.77□□□□□ -0.04
CLP1-205ENST00000533682 PDE1AP54750 535 aa14.77□□□□□ -0.04
CLP1-205ENST00000533682 KSR2Q6VAB6 950 aa14.77□□□□□ -0.04
CLP1-205ENST00000533682 DDX54Q8TDD1 881 aaKnown RBP14.77□□□□□ -0.04
CLP1-205ENST00000533682 LRRCC1Q9C099 1032 aa14.77□□□□□ -0.04
CLP1-205ENST00000533682 DDX21Q9NR30 783 aaKnown RBP eCLIP14.77□□□□□ -0.04
CLP1-205ENST00000533682 COL5A2P05997 1499 aaPredicted RBP14.77□□□□□ -0.04
CLP1-205ENST00000533682 CDC45O75419 566 aa14.77□□□□□ -0.05
CLP1-205ENST00000533682 CABP4P57796 275 aa14.77□□□□□ -0.05
CLP1-205ENST00000533682 BECN1Q14457 450 aa14.77□□□□□ -0.05
CLP1-205ENST00000533682 SSH3Q8TE77 659 aa14.77□□□□□ -0.05
CLP1-205ENST00000533682 ZCRB1Q8TBF4 217 aaKnown RBP14.76□□□□□ -0.05
CLP1-205ENST00000533682 KIF2CQ99661 725 aa14.76□□□□□ -0.05
CLP1-205ENST00000533682 HYPKQ9NX55 129 aa14.76□□□□□ -0.05
CLP1-205ENST00000533682 IBTKQ9P2D0 1353 aaPredicted RBP14.76□□□□□ -0.05
CLP1-205ENST00000533682 SURF6O75683 361 aaKnown RBP14.76□□□□□ -0.05
CLP1-205ENST00000533682 RBM25P49756 843 aaKnown RBP14.76□□□□□ -0.05
CLP1-205ENST00000533682 EVA1CP58658 441 aa14.76□□□□□ -0.05
CLP1-205ENST00000533682 COPS6Q7L5N1 327 aa14.75□□□□□ -0.05
CLP1-205ENST00000533682 TTC5Q8N0Z6 440 aa14.75□□□□□ -0.05
CLP1-205ENST00000533682 RBM42Q9BTD8 480 aaKnown RBP14.75□□□□□ -0.05
CLP1-205ENST00000533682 CHMP4AQ9BY43 222 aa14.75□□□□□ -0.05
CLP1-205ENST00000533682 C9orf78Q9NZ63 289 aaPredicted RBP14.75□□□□□ -0.05
CLP1-205ENST00000533682 PKD1L3Q7Z443 1732 aa14.75□□□□□ -0.05
CLP1-205ENST00000533682 KAT6BQ8WYB5 2073 aa14.75□□□□□ -0.05
CLP1-205ENST00000533682 NFKBIBQ15653 356 aa14.75□□□□□ -0.05
CLP1-205ENST00000533682 XAGE3Q8WTP9 111 aa14.75□□□□□ -0.05
CLP1-205ENST00000533682 SALL3Q9BXA9 1300 aa14.74□□□□□ -0.05
CLP1-205ENST00000533682 POLA2Q14181 598 aa14.74□□□□□ -0.05
CLP1-205ENST00000533682 NUTM1Q86Y26 1132 aa14.74□□□□□ -0.05
CLP1-205ENST00000533682 JARID2Q92833 1246 aaPredicted RBP14.74□□□□□ -0.05
CLP1-205ENST00000533682 ABCA3Q99758 1704 aa14.74□□□□□ -0.05
CLP1-205ENST00000533682 IGKV5-2P06315 115 aa14.73□□□□□ -0.05
CLP1-205ENST00000533682 SNRPA1P09661 255 aaKnown RBP14.73□□□□□ -0.05
CLP1-205ENST00000533682 RIC3Q7Z5B4 369 aa14.73□□□□□ -0.05
CLP1-205ENST00000533682 ABCC6O95255 1503 aa14.73□□□□□ -0.05
CLP1-205ENST00000533682 CD2BP2O95400 341 aaKnown RBP14.73□□□□□ -0.05
CLP1-205ENST00000533682 IL2RBP14784 551 aa14.73□□□□□ -0.05
CLP1-205ENST00000533682 LRP10Q7Z4F1 713 aa14.73□□□□□ -0.05
CLP1-205ENST00000533682 KAZALD1Q96I82 304 aa14.73□□□□□ -0.05
CLP1-205ENST00000533682 CARD10Q9BWT7 1032 aa14.73□□□□□ -0.05
CLP1-205ENST00000533682 BTG4Q9NY30 223 aa14.73□□□□□ -0.05
CLP1-205ENST00000533682 MX1P20591 662 aa14.72□□□□□ -0.05
CLP1-205ENST00000533682 FMNL2Q96PY5 1086 aa14.72□□□□□ -0.05
CLP1-205ENST00000533682 OSBPL3Q9H4L5 887 aa14.72□□□□□ -0.05
CLP1-205ENST00000533682 PA2G4Q9UQ80 394 aaKnown RBP14.72□□□□□ -0.05
CLP1-205ENST00000533682 PTCD1O75127 700 aaKnown RBP14.72□□□□□ -0.05
CLP1-205ENST00000533682 FRAT2O75474 233 aaPredicted RBP14.72□□□□□ -0.05
CLP1-205ENST00000533682 HSP90AB1P08238 724 aaKnown RBP14.72□□□□□ -0.05
CLP1-205ENST00000533682 UNC5CLQ8IV45 518 aa14.72□□□□□ -0.05
CLP1-205ENST00000533682 ANTXR1Q9H6X2 564 aa14.72□□□□□ -0.05
CLP1-205ENST00000533682 PCDH11XQ9BZA7 1347 aa14.71□□□□□ -0.05
CLP1-205ENST00000533682 PCDH11YQ9BZA8 1340 aa14.71□□□□□ -0.05
CLP1-205ENST00000533682 LINS1Q8NG48 757 aa14.71□□□□□ -0.05
CLP1-205ENST00000533682 NHSL1Q5SYE7 1610 aa14.71□□□□□ -0.06
CLP1-205ENST00000533682 RHPN1Q8TCX5 695 aa14.71□□□□□ -0.06
CLP1-205ENST00000533682 SUCLG2Q96I99 432 aa14.71□□□□□ -0.06
CLP1-205ENST00000533682 MRC1P22897 1456 aa14.7□□□□□ -0.06
CLP1-205ENST00000533682 GRM8O00222 908 aa14.7□□□□□ -0.06
CLP1-205ENST00000533682 ALDH1L1O75891 902 aa14.7□□□□□ -0.06
CLP1-205ENST00000533682 DDX58O95786 925 aaKnown RBP14.7□□□□□ -0.06
CLP1-205ENST00000533682 MAP4K4O95819 1239 aaPredicted RBP14.7□□□□□ -0.06
CLP1-205ENST00000533682 MYD88Q99836 296 aa14.7□□□□□ -0.06
CLP1-205ENST00000533682 RILPL2Q969X0 211 aa14.7□□□□□ -0.06
CLP1-205ENST00000533682 BICC1Q9H694 974 aaKnown RBP14.7□□□□□ -0.06
CLP1-205ENST00000533682 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.7□□□□□ -0.06
CLP1-205ENST00000533682 ANKRD13DQ6ZTN6 518 aa14.69□□□□□ -0.06
CLP1-205ENST00000533682 USP26Q9BXU7 913 aa14.69□□□□□ -0.06
CLP1-205ENST00000533682 TRIM6-TRIM34B2RNG4 842 aa14.68□□□□□ -0.06
CLP1-205ENST00000533682 NBPF26B4DH59 902 aa14.68□□□□□ -0.06
CLP1-205ENST00000533682 ATP5J2-PTCD1G3V325 749 aa14.68□□□□□ -0.06
CLP1-205ENST00000533682 NBPF14Q5TI25 921 aa14.68□□□□□ -0.06
CLP1-205ENST00000533682 NBPF10Q6P3W6 841 aaKnown RBP14.68□□□□□ -0.06
CLP1-205ENST00000533682 NBPF15Q8N660 670 aa14.68□□□□□ -0.06
CLP1-205ENST00000533682 PARP4Q9UKK3 1724 aaKnown RBP14.68□□□□□ -0.06
CLP1-205ENST00000533682 NEURL1BA8MQ27 555 aa14.68□□□□□ -0.06
CLP1-205ENST00000533682 A1BGP04217 495 aa14.68□□□□□ -0.06
CLP1-205ENST00000533682 KLHDC4Q8TBB5 520 aa14.68□□□□□ -0.06
CLP1-205ENST00000533682 EPHA10Q5JZY3 1008 aa14.67□□□□□ -0.06
CLP1-205ENST00000533682 SHANK3Q9BYB0 1731 aa14.67□□□□□ -0.06
CLP1-205ENST00000533682 OS9Q13438 667 aaPredicted RBP14.67□□□□□ -0.06
CLP1-205ENST00000533682 METTL22Q9BUU2 404 aaPredicted RBP14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms