RNA–Protein interactions for RNA: ENST00000533533.5

COPB1-210, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-210ENST00000533533 INTS5Q6P9B9 1019 aaKnown RBP11.78□□□□□ -0.52
COPB1-210ENST00000533533 DNAJC5GQ8N7S2 189 aa11.78□□□□□ -0.52
COPB1-210ENST00000533533 AKAP4Q5JQC9 854 aa11.77□□□□□ -0.53
COPB1-210ENST00000533533 SLC52A2Q9HAB3 445 aa11.77□□□□□ -0.53
COPB1-210ENST00000533533 AFDNP55196 1824 aaKnown RBP11.76□□□□□ -0.53
COPB1-210ENST00000533533 POLRMTO00411 1230 aaKnown RBP11.76□□□□□ -0.53
COPB1-210ENST00000533533 ZPR1O75312 459 aa11.76□□□□□ -0.53
COPB1-210ENST00000533533 TM4SF1P30408 202 aa11.76□□□□□ -0.53
COPB1-210ENST00000533533 CHRNA5P30532 468 aa11.76□□□□□ -0.53
COPB1-210ENST00000533533 DNAJC10Q8IXB1 793 aa11.76□□□□□ -0.53
COPB1-210ENST00000533533 RBM46Q8TBY0 533 aaKnown RBP11.76□□□□□ -0.53
COPB1-210ENST00000533533 WDR90Q96KV7 1748 aa11.75□□□□□ -0.53
COPB1-210ENST00000533533 USPL1Q5W0Q7 1092 aa11.75□□□□□ -0.53
COPB1-210ENST00000533533 C16orf71Q8IYS4 520 aaPredicted RBP11.75□□□□□ -0.53
COPB1-210ENST00000533533 LGR6Q9HBX8 967 aa11.75□□□□□ -0.53
COPB1-210ENST00000533533 RNF181Q9P0P0 153 aa11.75□□□□□ -0.53
COPB1-210ENST00000533533 SOS1Q07889 1333 aaPredicted RBP11.75□□□□□ -0.53
COPB1-210ENST00000533533 KDM2BQ8NHM5 1336 aa11.75□□□□□ -0.53
COPB1-210ENST00000533533 CCDC88AQ3V6T2 1871 aa11.74□□□□□ -0.53
COPB1-210ENST00000533533 RNMTO43148 476 aaKnown RBP11.74□□□□□ -0.53
COPB1-210ENST00000533533 CYP19A1P11511 503 aaPredicted RBP11.74□□□□□ -0.53
COPB1-210ENST00000533533 AMER1Q5JTC6 1135 aaPredicted RBP11.74□□□□□ -0.53
COPB1-210ENST00000533533 MRC1P22897 1456 aa11.74□□□□□ -0.53
COPB1-210ENST00000533533 KCPQ6ZWJ8 1503 aa11.74□□□□□ -0.53
COPB1-210ENST00000533533 FSTL1Q12841 308 aa11.73□□□□□ -0.53
COPB1-210ENST00000533533 SLC39A6Q13433 755 aa11.73□□□□□ -0.53
COPB1-210ENST00000533533 NFIXQ14938 502 aa11.73□□□□□ -0.53
COPB1-210ENST00000533533 TNRC6CQ9HCJ0 1690 aaKnown RBP11.73□□□□□ -0.53
COPB1-210ENST00000533533 NRXN2Q9P2S2 1712 aa11.73□□□□□ -0.53
COPB1-210ENST00000533533 NARFQ9UHQ1 456 aa11.73□□□□□ -0.53
COPB1-210ENST00000533533 DLEC1Q9Y238 1755 aa11.72□□□□□ -0.53
COPB1-210ENST00000533533 COL15A1P39059 1388 aa11.72□□□□□ -0.53
COPB1-210ENST00000533533 PER1O15534 1290 aaPredicted RBP11.72□□□□□ -0.53
COPB1-210ENST00000533533 HMOX1P09601 288 aa11.72□□□□□ -0.53
COPB1-210ENST00000533533 RRAGCQ9HB90 399 aa11.72□□□□□ -0.53
COPB1-210ENST00000533533 ZBTB1Q9Y2K1 713 aa11.72□□□□□ -0.53
COPB1-210ENST00000533533 UBR2Q8IWV8 1755 aa11.72□□□□□ -0.53
COPB1-210ENST00000533533 DDX10Q13206 875 aaKnown RBP11.71□□□□□ -0.53
COPB1-210ENST00000533533 VSIG10Q8N0Z9 540 aa11.71□□□□□ -0.53
COPB1-210ENST00000533533 ZC3H4Q9UPT8 1303 aaKnown RBP11.7□□□□□ -0.54
COPB1-210ENST00000533533 SERPINB2P05120 415 aa11.7□□□□□ -0.54
COPB1-210ENST00000533533 HTRA3P83110 453 aa11.7□□□□□ -0.54
COPB1-210ENST00000533533 MTHFSDQ2M296 383 aaKnown RBP11.7□□□□□ -0.54
COPB1-210ENST00000533533 KLRG1Q96E93 195 aa11.7□□□□□ -0.54
COPB1-210ENST00000533533 BCL2L12Q9HB09 334 aa11.7□□□□□ -0.54
COPB1-210ENST00000533533 SLC4A2P04920 1241 aa11.69□□□□□ -0.54
COPB1-210ENST00000533533 LMNB1P20700 586 aa11.69□□□□□ -0.54
COPB1-210ENST00000533533 RASSF7Q02833 373 aa11.69□□□□□ -0.54
COPB1-210ENST00000533533 TTLL6Q8N841 843 aa11.69□□□□□ -0.54
COPB1-210ENST00000533533 DIAPH1O60610 1272 aaKnown RBP11.68□□□□□ -0.54
COPB1-210ENST00000533533 STARD3NLO95772 234 aa11.68□□□□□ -0.54
COPB1-210ENST00000533533 CANXP27824 592 aaKnown RBP11.68□□□□□ -0.54
COPB1-210ENST00000533533 JMYQ8N9B5 988 aa11.68□□□□□ -0.54
COPB1-210ENST00000533533 SMC1BQ8NDV3 1235 aa11.68□□□□□ -0.54
COPB1-210ENST00000533533 ANKRD31Q8N7Z5 1873 aa11.68□□□□□ -0.54
COPB1-210ENST00000533533 DICER1Q9UPY3 1922 aaKnown RBP11.67□□□□□ -0.54
COPB1-210ENST00000533533 A0A087WZG4 1122 aa11.67□□□□□ -0.54
COPB1-210ENST00000533533 GLTPD2A6NH11 291 aa11.67□□□□□ -0.54
COPB1-210ENST00000533533 H0YIN7 160 aa11.67□□□□□ -0.54
COPB1-210ENST00000533533 PRELPP51888 382 aa11.67□□□□□ -0.54
COPB1-210ENST00000533533 EIF5P55010 431 aaKnown RBP11.67□□□□□ -0.54
COPB1-210ENST00000533533 C2CD5Q86YS7 1000 aa11.67□□□□□ -0.54
COPB1-210ENST00000533533 TTC5Q8N0Z6 440 aa11.67□□□□□ -0.54
COPB1-210ENST00000533533 CARMIL3Q8ND23 1372 aa11.67□□□□□ -0.54
COPB1-210ENST00000533533 TIAM2Q8IVF5 1701 aa11.66□□□□□ -0.54
COPB1-210ENST00000533533 VEGFAP15692 232 aaPredicted RBP11.66□□□□□ -0.54
COPB1-210ENST00000533533 BICDL1Q6ZP65 573 aa11.66□□□□□ -0.54
COPB1-210ENST00000533533 SIPA1L3O60292 1781 aaPredicted RBP11.66□□□□□ -0.54
COPB1-210ENST00000533533 NPC1L1Q9UHC9 1359 aa11.66□□□□□ -0.54
COPB1-210ENST00000533533 FER1L6Q2WGJ9 1857 aa11.66□□□□□ -0.54
COPB1-210ENST00000533533 NFKBIEO00221 500 aa11.65□□□□□ -0.54
COPB1-210ENST00000533533 ZNF790Q6PG37 636 aa11.65□□□□□ -0.54
COPB1-210ENST00000533533 ZNF496Q96IT1 587 aaPredicted RBP11.65□□□□□ -0.54
COPB1-210ENST00000533533 HEG1Q9ULI3 1381 aa11.65□□□□□ -0.55
COPB1-210ENST00000533533 ZNF316A6NFI3 1004 aaPredicted RBP11.64□□□□□ -0.55
COPB1-210ENST00000533533 GNAT3A8MTJ3 354 aa11.64□□□□□ -0.55
COPB1-210ENST00000533533 TEFQ10587 303 aa11.64□□□□□ -0.55
COPB1-210ENST00000533533 TBC1D9BQ66K14 1250 aa11.64□□□□□ -0.55
COPB1-210ENST00000533533 IL17REQ8NFR9 667 aa11.64□□□□□ -0.55
COPB1-210ENST00000533533 BRIP1Q9BX63 1249 aa11.64□□□□□ -0.55
COPB1-210ENST00000533533 TEX13AQ9BXU3 409 aaPredicted RBP11.64□□□□□ -0.55
COPB1-210ENST00000533533 PDZRN3Q9UPQ7 1066 aa11.64□□□□□ -0.55
COPB1-210ENST00000533533 SCN7AQ01118 1682 aa11.64□□□□□ -0.55
COPB1-210ENST00000533533 COL3A1P02461 1466 aaPredicted RBP11.63□□□□□ -0.55
COPB1-210ENST00000533533 U2SURPO15042 1029 aaKnown RBP11.63□□□□□ -0.55
COPB1-210ENST00000533533 PDE6BP35913 854 aa11.63□□□□□ -0.55
COPB1-210ENST00000533533 COL13A1Q5TAT6 717 aaPredicted RBP11.63□□□□□ -0.55
COPB1-210ENST00000533533 GAS2L2Q8NHY3 880 aa11.63□□□□□ -0.55
COPB1-210ENST00000533533 ZNF622Q969S3 477 aaKnown RBP eCLIP11.63□□□□□ -0.556e-21■□□□□ 8.9
COPB1-210ENST00000533533 TBC1D2BQ9UPU7 963 aa11.63□□□□□ -0.55
COPB1-210ENST00000533533 CACNA1SQ13698 1873 aa11.63□□□□□ -0.55
COPB1-210ENST00000533533 COL11A2P13942 1736 aaPredicted RBP11.63□□□□□ -0.55
COPB1-210ENST00000533533 SLX4Q8IY92 1834 aa11.63□□□□□ -0.55
COPB1-210ENST00000533533 C21orf2O43822 256 aa11.62□□□□□ -0.55
COPB1-210ENST00000533533 IL6STP40189 918 aaPredicted RBP11.62□□□□□ -0.55
COPB1-210ENST00000533533 PRR5LQ6MZQ0 368 aa11.62□□□□□ -0.55
COPB1-210ENST00000533533 DPY19L2Q6NUT2 758 aa11.62□□□□□ -0.55
COPB1-210ENST00000533533 CFAP53Q96M91 514 aa11.62□□□□□ -0.55
COPB1-210ENST00000533533 ZNF330Q9Y3S2 320 aaPredicted RBP11.62□□□□□ -0.55
COPB1-210ENST00000533533 POTECB2RU33 542 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms