RNA–Protein interactions for RNA: ENST00000533316.1

ATG13-220, Transcript of autophagy related 13, humanhuman

TSL 2

Gene ATG13, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG13-220ENST00000533316 SOS1Q07889 1333 aaPredicted RBP13.92□□□□□ -0.18
ATG13-220ENST00000533316 CYP19A1P11511 503 aaPredicted RBP13.92□□□□□ -0.18
ATG13-220ENST00000533316 BICDL1Q6ZP65 573 aa13.92□□□□□ -0.18
ATG13-220ENST00000533316 MORC1Q86VD1 984 aa13.92□□□□□ -0.18
ATG13-220ENST00000533316 CCDC24Q8N4L8 307 aa13.92□□□□□ -0.18
ATG13-220ENST00000533316 ZBTB1Q9Y2K1 713 aa13.92□□□□□ -0.18
ATG13-220ENST00000533316 CARMIL3Q8ND23 1372 aa13.92□□□□□ -0.18
ATG13-220ENST00000533316 AFDNP55196 1824 aaKnown RBP13.92□□□□□ -0.18
ATG13-220ENST00000533316 SERPINB2P05120 415 aa13.91□□□□□ -0.18
ATG13-220ENST00000533316 IL13P35225 146 aa13.91□□□□□ -0.18
ATG13-220ENST00000533316 TNRC6CQ9HCJ0 1690 aaKnown RBP13.91□□□□□ -0.18
ATG13-220ENST00000533316 HMOX1P09601 288 aa13.9□□□□□ -0.18
ATG13-220ENST00000533316 HSPA1AP0DMV8 641 aaKnown RBP13.9□□□□□ -0.18
ATG13-220ENST00000533316 HSPA1BP0DMV9 641 aaKnown RBP13.9□□□□□ -0.18
ATG13-220ENST00000533316 HSPA5P11021 654 aaKnown RBP13.9□□□□□ -0.18
ATG13-220ENST00000533316 C2CD5Q86YS7 1000 aa13.9□□□□□ -0.18
ATG13-220ENST00000533316 SLC52A2Q9HAB3 445 aa13.9□□□□□ -0.18
ATG13-220ENST00000533316 CCDC88AQ3V6T2 1871 aa13.89□□□□□ -0.19
ATG13-220ENST00000533316 SCN11AQ9UI33 1791 aa13.89□□□□□ -0.19
ATG13-220ENST00000533316 GLTPD2A6NH11 291 aa13.89□□□□□ -0.19
ATG13-220ENST00000533316 POTECB2RU33 542 aa13.89□□□□□ -0.19
ATG13-220ENST00000533316 NFKBIEO00221 500 aa13.89□□□□□ -0.19
ATG13-220ENST00000533316 RNMTO43148 476 aaKnown RBP13.89□□□□□ -0.19
ATG13-220ENST00000533316 LMNB1P20700 586 aa13.89□□□□□ -0.19
ATG13-220ENST00000533316 CANXP27824 592 aaKnown RBP13.89□□□□□ -0.19
ATG13-220ENST00000533316 NARFQ9UHQ1 456 aa13.89□□□□□ -0.19
ATG13-220ENST00000533316 COL15A1P39059 1388 aa13.88□□□□□ -0.19
ATG13-220ENST00000533316 VEGFAP15692 232 aaPredicted RBP13.88□□□□□ -0.19
ATG13-220ENST00000533316 AKAP4Q5JQC9 854 aa13.88□□□□□ -0.19
ATG13-220ENST00000533316 TTLL6Q8N841 843 aa13.88□□□□□ -0.19
ATG13-220ENST00000533316 C21orf2O43822 256 aa13.86□□□□□ -0.19
ATG13-220ENST00000533316 POTEIP0CG38 1075 aa13.86□□□□□ -0.19
ATG13-220ENST00000533316 POTEJP0CG39 1038 aa13.86□□□□□ -0.19
ATG13-220ENST00000533316 MTHFSDQ2M296 383 aaKnown RBP13.86□□□□□ -0.19
ATG13-220ENST00000533316 ZNF622Q969S3 477 aaKnown RBP eCLIP13.86□□□□□ -0.19
ATG13-220ENST00000533316 TIAM2Q8IVF5 1701 aa13.85□□□□□ -0.19
ATG13-220ENST00000533316 H0YIN7 160 aa13.85□□□□□ -0.19
ATG13-220ENST00000533316 TBC1D9BQ66K14 1250 aa13.85□□□□□ -0.19
ATG13-220ENST00000533316 MKRN1Q9UHC7 482 aaKnown RBP13.85□□□□□ -0.19
ATG13-220ENST00000533316 ZNF330Q9Y3S2 320 aaPredicted RBP13.85□□□□□ -0.19
ATG13-220ENST00000533316 NRXN2Q9P2S2 1712 aa13.84□□□□□ -0.19
ATG13-220ENST00000533316 PCGF6Q9BYE7 350 aa13.84□□□□□ -0.19
ATG13-220ENST00000533316 DLEC1Q9Y238 1755 aa13.83□□□□□ -0.19
ATG13-220ENST00000533316 VIRMAQ69YN4 1812 aaKnown RBP13.83□□□□□ -0.2
ATG13-220ENST00000533316 EIF4G2P78344 907 aaKnown RBP eCLIP13.83□□□□□ -0.2
ATG13-220ENST00000533316 CNGB1Q14028 1251 aaPredicted RBP13.83□□□□□ -0.2
ATG13-220ENST00000533316 TBC1D2BQ9UPU7 963 aa13.83□□□□□ -0.2
ATG13-220ENST00000533316 ANKRD31Q8N7Z5 1873 aa13.82□□□□□ -0.2
ATG13-220ENST00000533316 DDNO94850 711 aaPredicted RBP13.82□□□□□ -0.2
ATG13-220ENST00000533316 ERFEQ4G0M1 354 aa13.82□□□□□ -0.2
ATG13-220ENST00000533316 KNSTRNQ9Y448 316 aa13.82□□□□□ -0.2
ATG13-220ENST00000533316 ZC3H4Q9UPT8 1303 aaKnown RBP13.82□□□□□ -0.2
ATG13-220ENST00000533316 MRC1P22897 1456 aa13.81□□□□□ -0.2
ATG13-220ENST00000533316 EIF5P55010 431 aaKnown RBP13.81□□□□□ -0.2
ATG13-220ENST00000533316 TRIM26Q12899 539 aaPredicted RBP13.81□□□□□ -0.2
ATG13-220ENST00000533316 PRR5LQ6MZQ0 368 aa13.81□□□□□ -0.2
ATG13-220ENST00000533316 PIP4K2AP48426 406 aaPredicted RBP13.8□□□□□ -0.2
ATG13-220ENST00000533316 AMER1Q5JTC6 1135 aaPredicted RBP13.8□□□□□ -0.2
ATG13-220ENST00000533316 DPY19L2Q6NUT2 758 aa13.8□□□□□ -0.2
ATG13-220ENST00000533316 ZNF496Q96IT1 587 aaPredicted RBP13.8□□□□□ -0.2
ATG13-220ENST00000533316 COL11A2P13942 1736 aaPredicted RBP13.8□□□□□ -0.2
ATG13-220ENST00000533316 KCNQ3O43525 872 aa13.79□□□□□ -0.2
ATG13-220ENST00000533316 A1BGP04217 495 aa13.79□□□□□ -0.2
ATG13-220ENST00000533316 SLX4Q8IY92 1834 aa13.78□□□□□ -0.2
ATG13-220ENST00000533316 STARD3NLO95772 234 aa13.78□□□□□ -0.2
ATG13-220ENST00000533316 CHADLQ6NUI6 762 aa13.78□□□□□ -0.2
ATG13-220ENST00000533316 TTC5Q8N0Z6 440 aa13.78□□□□□ -0.2
ATG13-220ENST00000533316 VSIG10Q8N0Z9 540 aa13.78□□□□□ -0.2
ATG13-220ENST00000533316 IL17REQ8NFR9 667 aa13.78□□□□□ -0.2
ATG13-220ENST00000533316 BRIP1Q9BX63 1249 aa13.78□□□□□ -0.2
ATG13-220ENST00000533316 TIMELESSQ9UNS1 1208 aa13.78□□□□□ -0.2
ATG13-220ENST00000533316 CACNA1SQ13698 1873 aa13.78□□□□□ -0.2
ATG13-220ENST00000533316 FOXN1O15353 648 aa13.77□□□□□ -0.21
ATG13-220ENST00000533316 PDE6BP35913 854 aa13.77□□□□□ -0.21
ATG13-220ENST00000533316 FER1L6Q2WGJ9 1857 aa13.77□□□□□ -0.21
ATG13-220ENST00000533316 CC2D1BQ5T0F9 858 aaKnown RBP13.77□□□□□ -0.21
ATG13-220ENST00000533316 OLFM4Q6UX06 510 aa13.77□□□□□ -0.21
ATG13-220ENST00000533316 UBR2Q8IWV8 1755 aa13.77□□□□□ -0.21
ATG13-220ENST00000533316 TAOK3Q9H2K8 898 aa13.77□□□□□ -0.21
ATG13-220ENST00000533316 A0A087WZG4 1122 aa13.76□□□□□ -0.21
ATG13-220ENST00000533316 CREBZFQ9NS37 354 aa13.76□□□□□ -0.21
ATG13-220ENST00000533316 DICER1Q9UPY3 1922 aaKnown RBP13.76□□□□□ -0.21
ATG13-220ENST00000533316 HEG1Q9ULI3 1381 aa13.75□□□□□ -0.21
ATG13-220ENST00000533316 PRAMEF22A3QJZ6 481 aa13.75□□□□□ -0.21
ATG13-220ENST00000533316 NPHP1O15259 732 aa13.75□□□□□ -0.21
ATG13-220ENST00000533316 DIAPH1O60610 1272 aaKnown RBP13.75□□□□□ -0.21
ATG13-220ENST00000533316 CAMTA2O94983 1202 aa13.75□□□□□ -0.21
ATG13-220ENST00000533316 PRPF40BQ6NWY9 871 aaKnown RBP13.75□□□□□ -0.21
ATG13-220ENST00000533316 ZNF790Q6PG37 636 aa13.75□□□□□ -0.21
ATG13-220ENST00000533316 U2SURPO15042 1029 aaKnown RBP13.74□□□□□ -0.21
ATG13-220ENST00000533316 SRGNP10124 158 aa13.74□□□□□ -0.21
ATG13-220ENST00000533316 CNBD1Q8NA66 436 aa13.74□□□□□ -0.21
ATG13-220ENST00000533316 SETDB2Q96T68 719 aa13.74□□□□□ -0.21
ATG13-220ENST00000533316 SCN7AQ01118 1682 aa13.73□□□□□ -0.21
ATG13-220ENST00000533316 ZNF541Q9H0D2 1346 aa13.73□□□□□ -0.21
ATG13-220ENST00000533316 FAM177BA6PVY3 158 aa13.73□□□□□ -0.21
ATG13-220ENST00000533316 VEGFBP49765 207 aa13.73□□□□□ -0.21
ATG13-220ENST00000533316 TEFQ10587 303 aa13.73□□□□□ -0.21
ATG13-220ENST00000533316 EAPPQ56P03 285 aaPredicted RBP13.73□□□□□ -0.21
ATG13-220ENST00000533316 ZNF277Q9NRM2 450 aaPredicted RBP13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms