RNA–Protein interactions for RNA: ENST00000533249.5

PKP3-210, Transcript of plakophilin 3, humanhuman

TSL 3

Gene PKP3, Length 1,111 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-210ENST00000533249 COL15A1P39059 1388 aa30.79■■■□□ 2.52
PKP3-210ENST00000533249 HSPA6P17066 643 aa30.78■■■□□ 2.52
PKP3-210ENST00000533249 DALRD3Q5D0E6 543 aaKnown RBP30.78■■■□□ 2.52
PKP3-210ENST00000533249 VSIG10Q8N0Z9 540 aa30.78■■■□□ 2.52
PKP3-210ENST00000533249 NARFQ9UHQ1 456 aa30.78■■■□□ 2.52
PKP3-210ENST00000533249 UBR2Q8IWV8 1755 aa30.77■■■□□ 2.52
PKP3-210ENST00000533249 TTC5Q8N0Z6 440 aa30.77■■■□□ 2.52
PKP3-210ENST00000533249 CEP350Q5VT06 3117 aa30.76■■■□□ 2.52
PKP3-210ENST00000533249 CANXP27824 592 aaKnown RBP30.76■■■□□ 2.51
PKP3-210ENST00000533249 NFIXQ14938 502 aa30.75■■■□□ 2.51
PKP3-210ENST00000533249 C9orf131Q5VYM1 1079 aa30.75■■■□□ 2.51
PKP3-210ENST00000533249 GNAT3A8MTJ3 354 aa30.74■■■□□ 2.51
PKP3-210ENST00000533249 TEFQ10587 303 aa30.74■■■□□ 2.51
PKP3-210ENST00000533249 GAS2L2Q8NHY3 880 aa30.74■■■□□ 2.51
PKP3-210ENST00000533249 AFDNP55196 1824 aaKnown RBP30.73■■■□□ 2.51
PKP3-210ENST00000533249 IL17REQ8NFR9 667 aa30.73■■■□□ 2.51
PKP3-210ENST00000533249 BCL2L12Q9HB09 334 aa30.73■■■□□ 2.51
PKP3-210ENST00000533249 STARD3NLO95772 234 aa30.71■■■□□ 2.51
PKP3-210ENST00000533249 NMRK2Q9NPI5 230 aa30.71■■■□□ 2.51
PKP3-210ENST00000533249 ZNF496Q96IT1 587 aaPredicted RBP30.7■■■□□ 2.51
PKP3-210ENST00000533249 SERPINB2P05120 415 aa30.69■■■□□ 2.5
PKP3-210ENST00000533249 ZNF790Q6PG37 636 aa30.69■■■□□ 2.5
PKP3-210ENST00000533249 RNF181Q9P0P0 153 aa30.68■■■□□ 2.5
PKP3-210ENST00000533249 HEG1Q9ULI3 1381 aa30.67■■■□□ 2.5
PKP3-210ENST00000533249 NRXN2Q9P2S2 1712 aa30.67■■■□□ 2.5
PKP3-210ENST00000533249 SIPA1L3O60292 1781 aaPredicted RBP30.67■■■□□ 2.5
PKP3-210ENST00000533249 BICDL1Q6ZP65 573 aa30.67■■■□□ 2.5
PKP3-210ENST00000533249 CFAP53Q96M91 514 aa30.67■■■□□ 2.5
PKP3-210ENST00000533249 TOMM70O94826 608 aa30.66■■■□□ 2.5
PKP3-210ENST00000533249 PRKAR2BP31323 418 aa30.66■■■□□ 2.5
PKP3-210ENST00000533249 EIF5P55010 431 aaKnown RBP30.66■■■□□ 2.5
PKP3-210ENST00000533249 ZNF330Q9Y3S2 320 aaPredicted RBP30.66■■■□□ 2.5
PKP3-210ENST00000533249 PHACTR3Q96KR7 559 aa30.65■■■□□ 2.5
PKP3-210ENST00000533249 A0A087WZG4 1122 aa30.64■■■□□ 2.5
PKP3-210ENST00000533249 TEX13AQ9BXU3 409 aaPredicted RBP30.63■■■□□ 2.49
PKP3-210ENST00000533249 RSPH6AQ9H0K4 717 aa30.63■■■□□ 2.49
PKP3-210ENST00000533249 FMNL2Q96PY5 1086 aa30.62■■■□□ 2.49
PKP3-210ENST00000533249 CARMIL3Q8ND23 1372 aa30.62■■■□□ 2.49
PKP3-210ENST00000533249 CEMIPQ8WUJ3 1361 aa30.61■■■□□ 2.49
PKP3-210ENST00000533249 SBF1O95248 1867 aa30.61■■■□□ 2.49
PKP3-210ENST00000533249 RASSF7Q02833 373 aa30.6■■■□□ 2.49
PKP3-210ENST00000533249 C2CD5Q86YS7 1000 aa30.6■■■□□ 2.49
PKP3-210ENST00000533249 TBC1D2BQ9UPU7 963 aa30.6■■■□□ 2.49
PKP3-210ENST00000533249 DLEC1Q9Y238 1755 aa30.6■■■□□ 2.49
PKP3-210ENST00000533249 NUDCQ9Y266 331 aa30.6■■■□□ 2.49
PKP3-210ENST00000533249 KCNQ3O43525 872 aa30.59■■■□□ 2.49
PKP3-210ENST00000533249 TBC1D9BQ66K14 1250 aa30.59■■■□□ 2.49
PKP3-210ENST00000533249 KDM2BQ8NHM5 1336 aa30.58■■■□□ 2.49
PKP3-210ENST00000533249 BTBD11A6QL63 1104 aa30.58■■■□□ 2.49
PKP3-210ENST00000533249 A1BGP04217 495 aa30.58■■■□□ 2.49
PKP3-210ENST00000533249 C16orf71Q8IYS4 520 aaPredicted RBP30.58■■■□□ 2.49
PKP3-210ENST00000533249 TTLL6Q8N841 843 aa30.58■■■□□ 2.49
PKP3-210ENST00000533249 SCN7AQ01118 1682 aa30.58■■■□□ 2.49
PKP3-210ENST00000533249 H0YIN7 160 aa30.57■■■□□ 2.48
PKP3-210ENST00000533249 U2AF1L5P0DN76 240 aaPredicted RBP30.57■■■□□ 2.48
PKP3-210ENST00000533249 IL6STP40189 918 aaPredicted RBP30.57■■■□□ 2.48
PKP3-210ENST00000533249 U2AF1Q01081 240 aaKnown RBP eCLIP30.57■■■□□ 2.48
PKP3-210ENST00000533249 PPP2R1AP30153 589 aa30.56■■■□□ 2.48
PKP3-210ENST00000533249 APLP1P51693 650 aa30.56■■■□□ 2.48
PKP3-210ENST00000533249 NPM2Q86SE8 214 aaKnown RBP30.56■■■□□ 2.48
PKP3-210ENST00000533249 CCDC24Q8N4L8 307 aa30.54■■■□□ 2.48
PKP3-210ENST00000533249 RBM46Q8TBY0 533 aaKnown RBP30.53■■■□□ 2.48
PKP3-210ENST00000533249 RRAGCQ9HB90 399 aa30.53■■■□□ 2.48
PKP3-210ENST00000533249 RTF1Q92541 710 aaKnown RBP30.52■■■□□ 2.48
PKP3-210ENST00000533249 ANKRD31Q8N7Z5 1873 aa30.52■■■□□ 2.48
PKP3-210ENST00000533249 MCM10Q7L590 875 aa30.51■■■□□ 2.47
PKP3-210ENST00000533249 LMNB1P20700 586 aa30.5■■■□□ 2.47
PKP3-210ENST00000533249 PIP4K2AP48426 406 aaPredicted RBP30.5■■■□□ 2.47
PKP3-210ENST00000533249 PRR5LQ6MZQ0 368 aa30.5■■■□□ 2.47
PKP3-210ENST00000533249 ZNF622Q969S3 477 aaKnown RBP eCLIP30.5■■■□□ 2.47
PKP3-210ENST00000533249 USP16Q9Y5T5 823 aa30.5■■■□□ 2.47
PKP3-210ENST00000533249 TNRC6CQ9HCJ0 1690 aaKnown RBP30.49■■■□□ 2.47
PKP3-210ENST00000533249 CAMTA2O94983 1202 aa30.49■■■□□ 2.47
PKP3-210ENST00000533249 PRELPP51888 382 aa30.49■■■□□ 2.47
PKP3-210ENST00000533249 BRIP1Q9BX63 1249 aa30.49■■■□□ 2.47
PKP3-210ENST00000533249 PRAMEF22A3QJZ6 481 aa30.48■■■□□ 2.47
PKP3-210ENST00000533249 PDE6BP35913 854 aa30.48■■■□□ 2.47
PKP3-210ENST00000533249 DZIP3Q86Y13 1208 aaKnown RBP30.48■■■□□ 2.47
PKP3-210ENST00000533249 SETDB2Q96T68 719 aa30.48■■■□□ 2.47
PKP3-210ENST00000533249 NPHP1O15259 732 aa30.47■■■□□ 2.47
PKP3-210ENST00000533249 DCTN1Q14203 1278 aa30.47■■■□□ 2.47
PKP3-210ENST00000533249 ZNF219Q9P2Y4 722 aaPredicted RBP30.47■■■□□ 2.47
PKP3-210ENST00000533249 ZC3H4Q9UPT8 1303 aaKnown RBP30.47■■■□□ 2.47
PKP3-210ENST00000533249 CCDC88AQ3V6T2 1871 aa30.46■■■□□ 2.47
PKP3-210ENST00000533249 NFKBIEO00221 500 aa30.46■■■□□ 2.47
PKP3-210ENST00000533249 COL11A2P13942 1736 aaPredicted RBP30.46■■■□□ 2.47
PKP3-210ENST00000533249 CNBD1Q8NA66 436 aa30.45■■■□□ 2.47
PKP3-210ENST00000533249 PDZRN3Q9UPQ7 1066 aa30.45■■■□□ 2.47
PKP3-210ENST00000533249 BCORQ6W2J9 1755 aa30.45■■■□□ 2.46
PKP3-210ENST00000533249 SNRPA1P09661 255 aaKnown RBP30.44■■■□□ 2.46
PKP3-210ENST00000533249 FSTL1Q12841 308 aa30.44■■■□□ 2.46
PKP3-210ENST00000533249 WDR90Q96KV7 1748 aa30.44■■■□□ 2.46
PKP3-210ENST00000533249 C21orf2O43822 256 aa30.43■■■□□ 2.46
PKP3-210ENST00000533249 IFFO2Q5TF58 517 aa30.43■■■□□ 2.46
PKP3-210ENST00000533249 TIAM2Q8IVF5 1701 aa30.43■■■□□ 2.46
PKP3-210ENST00000533249 DNAJC5GQ8N7S2 189 aa30.43■■■□□ 2.46
PKP3-210ENST00000533249 GLTPD2A6NH11 291 aa30.41■■■□□ 2.46
PKP3-210ENST00000533249 ST5P78524 1137 aa30.41■■■□□ 2.46
PKP3-210ENST00000533249 HTRA3P83110 453 aa30.41■■■□□ 2.46
PKP3-210ENST00000533249 HTATSF1O43719 755 aaKnown RBP30.4■■■□□ 2.46
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms