RNA–Protein interactions for RNA: ENST00000533129.5

CAPN1-224, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CAPN1, Length 2,792 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-224ENST00000533129 CADPS2Q86UW7 1296 aa17.93■□□□□ 0.46
CAPN1-224ENST00000533129 HMMRO75330 724 aa17.92■□□□□ 0.46
CAPN1-224ENST00000533129 FAM184AQ8NB25 1140 aa17.92■□□□□ 0.46
CAPN1-224ENST00000533129 MYRIPQ8NFW9 859 aa17.92■□□□□ 0.46
CAPN1-224ENST00000533129 KIAA0232Q92628 1395 aa17.92■□□□□ 0.46
CAPN1-224ENST00000533129 FAM83GA6ND36 823 aa17.92■□□□□ 0.46
CAPN1-224ENST00000533129 ANAPC15P60006 121 aa17.92■□□□□ 0.46
CAPN1-224ENST00000533129 AEBP1Q8IUX7 1158 aa17.92■□□□□ 0.46
CAPN1-224ENST00000533129 PDE1AP54750 535 aa17.91■□□□□ 0.46
CAPN1-224ENST00000533129 UVSSAQ2YD98 709 aa17.91■□□□□ 0.46
CAPN1-224ENST00000533129 FOXD4L5Q5VV16 416 aaPredicted RBP17.91■□□□□ 0.46
CAPN1-224ENST00000533129 FOXD4L4Q8WXT5 416 aaPredicted RBP17.91■□□□□ 0.46
CAPN1-224ENST00000533129 SLIT3O75094 1523 aa17.91■□□□□ 0.46
CAPN1-224ENST00000533129 KDRP35968 1356 aa17.91■□□□□ 0.46
CAPN1-224ENST00000533129 IGSF1Q8N6C5 1336 aa17.91■□□□□ 0.46
CAPN1-224ENST00000533129 MCCP23508 829 aa17.91■□□□□ 0.46
CAPN1-224ENST00000533129 PHRF1Q9P1Y6 1649 aaKnown RBP17.91■□□□□ 0.46
CAPN1-224ENST00000533129 APBB1O00213 710 aa17.91■□□□□ 0.46
CAPN1-224ENST00000533129 KRT28Q7Z3Y7 464 aa17.91■□□□□ 0.46
CAPN1-224ENST00000533129 PRIMPOLQ96LW4 560 aa17.91■□□□□ 0.46
CAPN1-224ENST00000533129 MEIS3Q99687 375 aa17.91■□□□□ 0.46
CAPN1-224ENST00000533129 LTN1O94822 1766 aa17.9■□□□□ 0.46
CAPN1-224ENST00000533129 IL17RAQ96F46 866 aa17.9■□□□□ 0.46
CAPN1-224ENST00000533129 CCDC94Q9BW85 323 aaPredicted RBP17.9■□□□□ 0.46
CAPN1-224ENST00000533129 ESYT1Q9BSJ8 1104 aa17.89■□□□□ 0.45
CAPN1-224ENST00000533129 HMGN5P82970 282 aaKnown RBP17.89■□□□□ 0.45
CAPN1-224ENST00000533129 DCTN1Q14203 1278 aa17.89■□□□□ 0.45
CAPN1-224ENST00000533129 PIBF1Q8WXW3 757 aa17.89■□□□□ 0.45
CAPN1-224ENST00000533129 XIRP1Q702N8 1843 aaKnown RBP17.88■□□□□ 0.45
CAPN1-224ENST00000533129 EYA1Q99502 592 aa17.88■□□□□ 0.45
CAPN1-224ENST00000533129 CHL1O00533 1208 aa17.87■□□□□ 0.45
CAPN1-224ENST00000533129 GTF2F1P35269 517 aaKnown RBP eCLIP17.87■□□□□ 0.454e-13■■■■□ 21.8
CAPN1-224ENST00000533129 IP6K1Q92551 441 aa17.87■□□□□ 0.45
CAPN1-224ENST00000533129 SALL3Q9BXA9 1300 aa17.87■□□□□ 0.45
CAPN1-224ENST00000533129 ALS2Q96Q42 1657 aa17.86■□□□□ 0.45
CAPN1-224ENST00000533129 WDR33Q9C0J8 1336 aaKnown RBP17.86■□□□□ 0.45
CAPN1-224ENST00000533129 TMEM87AQ8NBN3 555 aa17.86■□□□□ 0.45
CAPN1-224ENST00000533129 KRT24Q2M2I5 525 aa17.85■□□□□ 0.45
CAPN1-224ENST00000533129 DNTTIP2Q5QJE6 756 aaKnown RBP17.85■□□□□ 0.45
CAPN1-224ENST00000533129 PALD1Q9ULE6 856 aa17.85■□□□□ 0.45
CAPN1-224ENST00000533129 NPHP3Q7Z494 1330 aa17.85■□□□□ 0.45
CAPN1-224ENST00000533129 GCP02774 474 aa17.84■□□□□ 0.45
CAPN1-224ENST00000533129 NOLC1Q14978 699 aaKnown RBP eCLIP17.84■□□□□ 0.45
CAPN1-224ENST00000533129 GADD45BO75293 160 aaPredicted RBP17.84■□□□□ 0.45
CAPN1-224ENST00000533129 LETM1O95202 739 aaPredicted RBP17.84■□□□□ 0.45
CAPN1-224ENST00000533129 USP48Q86UV5 1035 aa17.84■□□□□ 0.45
CAPN1-224ENST00000533129 EPB41L2O43491 1005 aaKnown RBP17.83■□□□□ 0.45
CAPN1-224ENST00000533129 CCDC183Q5T5S1 534 aa17.83■□□□□ 0.45
CAPN1-224ENST00000533129 UTP14CQ5TAP6 766 aaKnown RBP17.83■□□□□ 0.45
CAPN1-224ENST00000533129 ZNF335Q9H4Z2 1342 aaPredicted RBP17.83■□□□□ 0.44
CAPN1-224ENST00000533129 CCT4P50991 539 aaKnown RBP17.83■□□□□ 0.44
CAPN1-224ENST00000533129 LMOD2Q6P5Q4 547 aa17.83■□□□□ 0.44
CAPN1-224ENST00000533129 SPTLC3Q9NUV7 552 aa17.83■□□□□ 0.44
CAPN1-224ENST00000533129 CHMLP26374 656 aa17.82■□□□□ 0.44
CAPN1-224ENST00000533129 ARHGEF25Q86VW2 580 aa17.82■□□□□ 0.44
CAPN1-224ENST00000533129 ANO2Q9NQ90 1003 aa17.82■□□□□ 0.44
CAPN1-224ENST00000533129 TCHHQ07283 1943 aa17.82■□□□□ 0.44
CAPN1-224ENST00000533129 MX1P20591 662 aa17.81■□□□□ 0.44
CAPN1-224ENST00000533129 USP25Q9UHP3 1055 aa17.81■□□□□ 0.44
CAPN1-224ENST00000533129 RPAP1Q9BWH6 1393 aaPredicted RBP17.81■□□□□ 0.44
CAPN1-224ENST00000533129 PLEKHG5O94827 1062 aa17.81■□□□□ 0.44
CAPN1-224ENST00000533129 ARID3AQ99856 593 aa17.81■□□□□ 0.44
CAPN1-224ENST00000533129 FKBP5Q13451 457 aaPredicted RBP17.8■□□□□ 0.44
CAPN1-224ENST00000533129 ZNF710Q8N1W2 664 aa17.8■□□□□ 0.44
CAPN1-224ENST00000533129 LTV1Q96GA3 475 aaPredicted RBP17.8■□□□□ 0.44
CAPN1-224ENST00000533129 LRRCC1Q9C099 1032 aa17.8■□□□□ 0.44
CAPN1-224ENST00000533129 GDPD2Q9HCC8 539 aa17.8■□□□□ 0.44
CAPN1-224ENST00000533129 PXDNQ92626 1479 aa17.8■□□□□ 0.44
CAPN1-224ENST00000533129 ADCY5O95622 1261 aa17.8■□□□□ 0.44
CAPN1-224ENST00000533129 SLC4A2P04920 1241 aa17.8■□□□□ 0.44
CAPN1-224ENST00000533129 DMTNQ08495 405 aa17.8■□□□□ 0.44
CAPN1-224ENST00000533129 TNS3Q68CZ2 1445 aa17.8■□□□□ 0.44
CAPN1-224ENST00000533129 GNAI2P04899 355 aa17.79■□□□□ 0.44
CAPN1-224ENST00000533129 MTHFSDQ2M296 383 aaKnown RBP17.79■□□□□ 0.44
CAPN1-224ENST00000533129 NOL8Q76FK4 1167 aaKnown RBP17.79■□□□□ 0.44
CAPN1-224ENST00000533129 STAP2Q9UGK3 403 aa17.79■□□□□ 0.44
CAPN1-224ENST00000533129 MED1Q15648 1581 aaPredicted RBP17.79■□□□□ 0.44
CAPN1-224ENST00000533129 SRCIN1Q9C0H9 1055 aa17.79■□□□□ 0.44
CAPN1-224ENST00000533129 EXOC6BQ9Y2D4 811 aa17.79■□□□□ 0.44
CAPN1-224ENST00000533129 CRB1P82279 1406 aa17.78■□□□□ 0.44
CAPN1-224ENST00000533129 ZNF830Q96NB3 372 aaPredicted RBP17.78■□□□□ 0.44
CAPN1-224ENST00000533129 AOX1Q06278 1338 aa17.78■□□□□ 0.44
CAPN1-224ENST00000533129 TSHZ3Q63HK5 1081 aa17.78■□□□□ 0.44
CAPN1-224ENST00000533129 KIF3AQ9Y496 699 aa17.78■□□□□ 0.44
CAPN1-224ENST00000533129 ZBTB7CA1YPR0 619 aa17.77■□□□□ 0.44
CAPN1-224ENST00000533129 HTATSF1O43719 755 aaKnown RBP17.77■□□□□ 0.44
CAPN1-224ENST00000533129 UBE2HP62256 183 aa17.77■□□□□ 0.44
CAPN1-224ENST00000533129 MCM10Q7L590 875 aa17.77■□□□□ 0.44
CAPN1-224ENST00000533129 UPF3BQ9BZI7 483 aaKnown RBP17.77■□□□□ 0.44
CAPN1-224ENST00000533129 TTC12Q9H892 705 aaPredicted RBP17.77■□□□□ 0.44
CAPN1-224ENST00000533129 RTF1Q92541 710 aaKnown RBP17.77■□□□□ 0.43
CAPN1-224ENST00000533129 TRIM6-TRIM34B2RNG4 842 aa17.76■□□□□ 0.43
CAPN1-224ENST00000533129 KDM4AO75164 1064 aa17.76■□□□□ 0.43
CAPN1-224ENST00000533129 ZSCAN20P17040 1043 aaPredicted RBP17.76■□□□□ 0.43
CAPN1-224ENST00000533129 HSPA4P34932 840 aa17.76■□□□□ 0.43
CAPN1-224ENST00000533129 FOXD4L6Q3SYB3 417 aaPredicted RBP17.76■□□□□ 0.43
CAPN1-224ENST00000533129 FOXD4L3Q6VB84 417 aaPredicted RBP17.76■□□□□ 0.43
CAPN1-224ENST00000533129 BRINP3Q76B58 766 aa17.76■□□□□ 0.43
CAPN1-224ENST00000533129 RILPL2Q969X0 211 aa17.76■□□□□ 0.43
CAPN1-224ENST00000533129 N4BP2Q86UW6 1770 aaPredicted RBP17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms