RNA–Protein interactions for RNA: ENST00000533123.5

SMPD1-208, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,211 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-208ENST00000533123 COG6Q9Y2V7 657 aa23.57■■□□□ 1.36
SMPD1-208ENST00000533123 SBF2Q86WG5 1849 aa23.57■■□□□ 1.36
SMPD1-208ENST00000533123 CLUAP1Q96AJ1 413 aa23.56■■□□□ 1.36
SMPD1-208ENST00000533123 BRPF1P55201 1214 aaPredicted RBP23.55■■□□□ 1.36
SMPD1-208ENST00000533123 SLC4A9Q96Q91 983 aa23.55■■□□□ 1.36
SMPD1-208ENST00000533123 CHPF2Q9P2E5 772 aa23.55■■□□□ 1.36
SMPD1-208ENST00000533123 NHSQ6T4R5 1651 aa23.55■■□□□ 1.36
SMPD1-208ENST00000533123 PALLDQ8WX93 1383 aa23.54■■□□□ 1.36
SMPD1-208ENST00000533123 KIF16BQ96L93 1317 aa23.53■■□□□ 1.36
SMPD1-208ENST00000533123 ANXA1P04083 346 aa23.53■■□□□ 1.36
SMPD1-208ENST00000533123 ZKSCAN2Q63HK3 967 aa23.53■■□□□ 1.36
SMPD1-208ENST00000533123 VSIG10Q8N0Z9 540 aa23.53■■□□□ 1.36
SMPD1-208ENST00000533123 CHMP4AQ9BY43 222 aa23.53■■□□□ 1.36
SMPD1-208ENST00000533123 BTAF1O14981 1849 aa23.52■■□□□ 1.36
SMPD1-208ENST00000533123 TRIM37O94972 964 aa23.52■■□□□ 1.36
SMPD1-208ENST00000533123 G2E3Q7L622 706 aa23.52■■□□□ 1.36
SMPD1-208ENST00000533123 SMARCC1Q92922 1105 aaPredicted RBP23.52■■□□□ 1.36
SMPD1-208ENST00000533123 BCL11BQ9C0K0 894 aaPredicted RBP23.52■■□□□ 1.36
SMPD1-208ENST00000533123 DNAJC10Q8IXB1 793 aa23.52■■□□□ 1.36
SMPD1-208ENST00000533123 DBF4Q9UBU7 674 aaPredicted RBP23.51■■□□□ 1.35
SMPD1-208ENST00000533123 LOC102724428A0A0B4J2F2 783 aa23.51■■□□□ 1.35
SMPD1-208ENST00000533123 PIP4K2AP48426 406 aaPredicted RBP23.51■■□□□ 1.35
SMPD1-208ENST00000533123 SIK1P57059 783 aa23.51■■□□□ 1.35
SMPD1-208ENST00000533123 PROSER3Q2NL68 480 aa23.51■■□□□ 1.35
SMPD1-208ENST00000533123 TRIM27P14373 513 aa23.5■■□□□ 1.35
SMPD1-208ENST00000533123 IPO8O15397 1037 aaKnown RBP23.49■■□□□ 1.35
SMPD1-208ENST00000533123 PDIA6Q15084 440 aa23.49■■□□□ 1.35
SMPD1-208ENST00000533123 ATF7IPQ6VMQ6 1270 aa23.49■■□□□ 1.35
SMPD1-208ENST00000533123 PHAXQ9H814 394 aaKnown RBP23.49■■□□□ 1.35
SMPD1-208ENST00000533123 ATP6V1AP38606 617 aa23.49■■□□□ 1.35
SMPD1-208ENST00000533123 TEX13AQ9BXU3 409 aaPredicted RBP23.48■■□□□ 1.35
SMPD1-208ENST00000533123 A1BGP04217 495 aa23.48■■□□□ 1.35
SMPD1-208ENST00000533123 MYL6BP14649 208 aa23.48■■□□□ 1.35
SMPD1-208ENST00000533123 DDX21Q9NR30 783 aaKnown RBP eCLIP23.48■■□□□ 1.35
SMPD1-208ENST00000533123 CACNA1FO60840 1977 aa23.48■■□□□ 1.35
SMPD1-208ENST00000533123 LAMB4A4D0S4 1761 aa23.47■■□□□ 1.35
SMPD1-208ENST00000533123 FLIIQ13045 1269 aa23.47■■□□□ 1.35
SMPD1-208ENST00000533123 FTSJ3Q8IY81 847 aaKnown RBP23.47■■□□□ 1.35
SMPD1-208ENST00000533123 DZIP1LQ8IYY4 767 aaKnown RBP23.47■■□□□ 1.35
SMPD1-208ENST00000533123 STARD3NLO95772 234 aa23.46■■□□□ 1.35
SMPD1-208ENST00000533123 KCNQ4P56696 695 aa23.46■■□□□ 1.35
SMPD1-208ENST00000533123 ARHGAP45Q92619 1136 aa23.46■■□□□ 1.35
SMPD1-208ENST00000533123 KDM2BQ8NHM5 1336 aa23.45■■□□□ 1.34
SMPD1-208ENST00000533123 NBPF26B4DH59 902 aa23.45■■□□□ 1.34
SMPD1-208ENST00000533123 ITPK1Q13572 414 aa23.45■■□□□ 1.34
SMPD1-208ENST00000533123 NBPF14Q5TI25 921 aa23.45■■□□□ 1.34
SMPD1-208ENST00000533123 NBPF10Q6P3W6 841 aaKnown RBP23.45■■□□□ 1.34
SMPD1-208ENST00000533123 NBPF15Q8N660 670 aa23.45■■□□□ 1.34
SMPD1-208ENST00000533123 PTPRCP08575 1304 aa23.45■■□□□ 1.34
SMPD1-208ENST00000533123 CYP19A1P11511 503 aaPredicted RBP23.44■■□□□ 1.34
SMPD1-208ENST00000533123 FKBP5Q13451 457 aaPredicted RBP23.44■■□□□ 1.34
SMPD1-208ENST00000533123 HYPKQ9NX55 129 aa23.44■■□□□ 1.34
SMPD1-208ENST00000533123 MVPQ14764 893 aaKnown RBP23.44■■□□□ 1.34
SMPD1-208ENST00000533123 TJP1Q07157 1748 aa23.43■■□□□ 1.34
SMPD1-208ENST00000533123 API5Q9BZZ5 524 aaKnown RBP23.43■■□□□ 1.34
SMPD1-208ENST00000533123 AIMP1Q12904 312 aaKnown RBP23.42■■□□□ 1.34
SMPD1-208ENST00000533123 LRP10Q7Z4F1 713 aa23.42■■□□□ 1.34
SMPD1-208ENST00000533123 RBM19Q9Y4C8 960 aaKnown RBP23.42■■□□□ 1.34
SMPD1-208ENST00000533123 ERBB4Q15303 1308 aa23.41■■□□□ 1.34
SMPD1-208ENST00000533123 F6X3S4 739 aa23.41■■□□□ 1.34
SMPD1-208ENST00000533123 SKAP1Q86WV1 359 aa23.41■■□□□ 1.34
SMPD1-208ENST00000533123 MS4A1P11836 297 aa23.4■■□□□ 1.34
SMPD1-208ENST00000533123 CCNL1Q9UK58 526 aaPredicted RBP23.4■■□□□ 1.34
SMPD1-208ENST00000533123 COPS6Q7L5N1 327 aa23.4■■□□□ 1.34
SMPD1-208ENST00000533123 TMEM57Q8N5G2 664 aa23.39■■□□□ 1.34
SMPD1-208ENST00000533123 XAGE3Q8WTP9 111 aa23.39■■□□□ 1.34
SMPD1-208ENST00000533123 CENPQQ7L2Z9 268 aaPredicted RBP23.39■■□□□ 1.33
SMPD1-208ENST00000533123 ITPRIPQ8IWB1 547 aa23.39■■□□□ 1.33
SMPD1-208ENST00000533123 ZBTB1Q9Y2K1 713 aa23.39■■□□□ 1.33
SMPD1-208ENST00000533123 ZNF330Q9Y3S2 320 aaPredicted RBP23.39■■□□□ 1.33
SMPD1-208ENST00000533123 ABCC4O15439 1325 aa23.38■■□□□ 1.33
SMPD1-208ENST00000533123 LY75O60449 1722 aa23.38■■□□□ 1.33
SMPD1-208ENST00000533123 APBA3O96018 575 aa23.38■■□□□ 1.33
SMPD1-208ENST00000533123 LINC00116Q8NCU8 138 aa23.38■■□□□ 1.33
SMPD1-208ENST00000533123 PI4KAP2A4QPH2 592 aa23.37■■□□□ 1.33
SMPD1-208ENST00000533123 CRKLP46109 303 aaKnown RBP23.37■■□□□ 1.33
SMPD1-208ENST00000533123 PI4KAP1Q8N8J0 262 aa23.37■■□□□ 1.33
SMPD1-208ENST00000533123 IGHDP01880 384 aa23.37■■□□□ 1.33
SMPD1-208ENST00000533123 INTS5Q6P9B9 1019 aaKnown RBP23.37■■□□□ 1.33
SMPD1-208ENST00000533123 SLC4A10Q6U841 1118 aa23.37■■□□□ 1.33
SMPD1-208ENST00000533123 ZNF831Q5JPB2 1677 aa23.36■■□□□ 1.33
SMPD1-208ENST00000533123 PCDHB15Q9Y5E8 787 aa23.36■■□□□ 1.33
SMPD1-208ENST00000533123 LRRC4BQ9NT99 713 aa23.35■■□□□ 1.33
SMPD1-208ENST00000533123 CCDC87Q9NVE4 849 aa23.35■■□□□ 1.33
SMPD1-208ENST00000533123 MYH14Q7Z406 1995 aaKnown RBP23.35■■□□□ 1.33
SMPD1-208ENST00000533123 CICQ96RK0 1608 aaPredicted RBP23.35■■□□□ 1.33
SMPD1-208ENST00000533123 ADCY9O60503 1353 aa23.34■■□□□ 1.33
SMPD1-208ENST00000533123 KSR2Q6VAB6 950 aa23.34■■□□□ 1.33
SMPD1-208ENST00000533123 DDX58O95786 925 aaKnown RBP23.33■■□□□ 1.33
SMPD1-208ENST00000533123 TTLL7Q6ZT98 887 aa23.33■■□□□ 1.33
SMPD1-208ENST00000533123 MAP3K2Q9Y2U5 619 aa23.33■■□□□ 1.33
SMPD1-208ENST00000533123 COL5A3P25940 1745 aaPredicted RBP23.33■■□□□ 1.33
SMPD1-208ENST00000533123 AAMPQ13685 434 aa23.33■■□□□ 1.33
SMPD1-208ENST00000533123 ANKRD13DQ6ZTN6 518 aa23.33■■□□□ 1.33
SMPD1-208ENST00000533123 DDX19BQ9UMR2 479 aa23.33■■□□□ 1.33
SMPD1-208ENST00000533123 RIC3Q7Z5B4 369 aa23.32■■□□□ 1.32
SMPD1-208ENST00000533123 PROM2Q8N271 834 aa23.32■■□□□ 1.32
SMPD1-208ENST00000533123 DNAAF4Q8WXU2 420 aa23.32■■□□□ 1.32
SMPD1-208ENST00000533123 PLSCR1O15162 318 aa23.32■■□□□ 1.32
SMPD1-208ENST00000533123 IL6STP40189 918 aaPredicted RBP23.32■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms