RNA–Protein interactions for RNA: ENST00000533011.5

CHMP4A-206, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 5

Gene CHMP4A, Length 733 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-206ENST00000533011 ATG3Q9NT62 314 aa13.75□□□□□ -0.21
CHMP4A-206ENST00000533011 POTECB2RU33 542 aa13.74□□□□□ -0.21
CHMP4A-206ENST00000533011 MAP2K1Q02750 393 aaPredicted RBP13.74□□□□□ -0.21
CHMP4A-206ENST00000533011 IFNL2Q8IZJ0 200 aa13.74□□□□□ -0.21
CHMP4A-206ENST00000533011 CHRNA5P30532 468 aa13.72□□□□□ -0.21
CHMP4A-206ENST00000533011 IL13P35225 146 aa13.72□□□□□ -0.21
CHMP4A-206ENST00000533011 VEGFBP49765 207 aa13.72□□□□□ -0.21
CHMP4A-206ENST00000533011 TTLL6Q8N841 843 aa13.72□□□□□ -0.21
CHMP4A-206ENST00000533011 TMEM88BA6NKF7 163 aa13.71□□□□□ -0.21
CHMP4A-206ENST00000533011 ERVV-2B6SEH9 535 aa13.71□□□□□ -0.21
CHMP4A-206ENST00000533011 TM4SF1P30408 202 aa13.71□□□□□ -0.21
CHMP4A-206ENST00000533011 RASSF7Q02833 373 aa13.71□□□□□ -0.21
CHMP4A-206ENST00000533011 ZNF831Q5JPB2 1677 aa13.7□□□□□ -0.22
CHMP4A-206ENST00000533011 IQCA1LA6NCM1 817 aa13.7□□□□□ -0.22
CHMP4A-206ENST00000533011 CCDC85CA6NKD9 419 aa13.7□□□□□ -0.22
CHMP4A-206ENST00000533011 DIAPH1O60610 1272 aaKnown RBP13.7□□□□□ -0.22
CHMP4A-206ENST00000533011 SULT6B1Q6IMI4 303 aa13.7□□□□□ -0.22
CHMP4A-206ENST00000533011 RBM42Q9BTD8 480 aaKnown RBP13.7□□□□□ -0.22
CHMP4A-206ENST00000533011 KDRP35968 1356 aa13.7□□□□□ -0.22
CHMP4A-206ENST00000533011 PASKQ96RG2 1323 aa13.69□□□□□ -0.22
CHMP4A-206ENST00000533011 POLRMTO00411 1230 aaKnown RBP13.69□□□□□ -0.22
CHMP4A-206ENST00000533011 HSPA8P11142 646 aaKnown RBP13.69□□□□□ -0.22
CHMP4A-206ENST00000533011 PHKG2P15735 406 aa13.69□□□□□ -0.22
CHMP4A-206ENST00000533011 FKBP8Q14318 412 aa13.69□□□□□ -0.22
CHMP4A-206ENST00000533011 PLEKHO1Q53GL0 409 aaPredicted RBP13.69□□□□□ -0.22
CHMP4A-206ENST00000533011 AEBP1Q8IUX7 1158 aa13.69□□□□□ -0.22
CHMP4A-206ENST00000533011 PDZRN3Q9UPQ7 1066 aa13.69□□□□□ -0.22
CHMP4A-206ENST00000533011 USP42Q9H9J4 1324 aaKnown RBP13.68□□□□□ -0.22
CHMP4A-206ENST00000533011 HSP90AB1P08238 724 aaKnown RBP13.68□□□□□ -0.22
CHMP4A-206ENST00000533011 DDR1Q08345 913 aa13.68□□□□□ -0.22
CHMP4A-206ENST00000533011 AMOTQ4VCS5 1084 aa13.68□□□□□ -0.22
CHMP4A-206ENST00000533011 LDHDQ86WU2 507 aa13.68□□□□□ -0.22
CHMP4A-206ENST00000533011 DEFB115Q30KQ5 88 aa13.67□□□□□ -0.22
CHMP4A-206ENST00000533011 ERFEQ4G0M1 354 aa13.67□□□□□ -0.22
CHMP4A-206ENST00000533011 CFAP53Q96M91 514 aa13.67□□□□□ -0.22
CHMP4A-206ENST00000533011 SLC4A9Q96Q91 983 aa13.67□□□□□ -0.22
CHMP4A-206ENST00000533011 COL3A1P02461 1466 aaPredicted RBP13.67□□□□□ -0.22
CHMP4A-206ENST00000533011 RASSF10A6NK89 507 aa13.66□□□□□ -0.22
CHMP4A-206ENST00000533011 H0YIN7 160 aa13.66□□□□□ -0.22
CHMP4A-206ENST00000533011 ZPR1O75312 459 aa13.66□□□□□ -0.22
CHMP4A-206ENST00000533011 PPP2R1AP30153 589 aa13.66□□□□□ -0.22
CHMP4A-206ENST00000533011 BEGAINQ9BUH8 593 aa13.66□□□□□ -0.22
CHMP4A-206ENST00000533011 NFKBIEO00221 500 aa13.65□□□□□ -0.22
CHMP4A-206ENST00000533011 HMOX1P09601 288 aa13.65□□□□□ -0.22
CHMP4A-206ENST00000533011 DDX10Q13206 875 aaKnown RBP13.65□□□□□ -0.22
CHMP4A-206ENST00000533011 CRKLP46109 303 aaKnown RBP13.64□□□□□ -0.23
CHMP4A-206ENST00000533011 ZNF530Q6P9A1 599 aaPredicted RBP13.64□□□□□ -0.23
CHMP4A-206ENST00000533011 SRP68Q9UHB9 627 aaKnown RBP13.64□□□□□ -0.23
CHMP4A-206ENST00000533011 U2SURPO15042 1029 aaKnown RBP13.63□□□□□ -0.23
CHMP4A-206ENST00000533011 ITGBL1O95965 494 aaPredicted RBP13.63□□□□□ -0.23
CHMP4A-206ENST00000533011 C1orf141Q5JVX7 400 aa13.63□□□□□ -0.23
CHMP4A-206ENST00000533011 WDR33Q9C0J8 1336 aaKnown RBP13.63□□□□□ -0.23
CHMP4A-206ENST00000533011 LTBP3Q9NS15 1303 aa13.63□□□□□ -0.23
CHMP4A-206ENST00000533011 CABP4P57796 275 aa13.62□□□□□ -0.23
CHMP4A-206ENST00000533011 C2CD5Q86YS7 1000 aa13.62□□□□□ -0.23
CHMP4A-206ENST00000533011 L3MBTL3Q96JM7 780 aaPredicted RBP13.62□□□□□ -0.23
CHMP4A-206ENST00000533011 NUDCQ9Y266 331 aa13.62□□□□□ -0.23
CHMP4A-206ENST00000533011 DDNO94850 711 aaPredicted RBP13.61□□□□□ -0.23
CHMP4A-206ENST00000533011 ECE1P42892 770 aa13.61□□□□□ -0.23
CHMP4A-206ENST00000533011 SOGA3Q5TF21 947 aa13.61□□□□□ -0.23
CHMP4A-206ENST00000533011 PNMA8AQ86V59 439 aaPredicted RBP13.61□□□□□ -0.23
CHMP4A-206ENST00000533011 TAF1DQ9H5J8 278 aaPredicted RBP13.61□□□□□ -0.23
CHMP4A-206ENST00000533011 VIRMAQ69YN4 1812 aaKnown RBP13.61□□□□□ -0.23
CHMP4A-206ENST00000533011 CA12O43570 354 aa13.6□□□□□ -0.23
CHMP4A-206ENST00000533011 SERPINB2P05120 415 aa13.6□□□□□ -0.23
CHMP4A-206ENST00000533011 POTEIP0CG38 1075 aa13.6□□□□□ -0.23
CHMP4A-206ENST00000533011 POTEJP0CG39 1038 aa13.6□□□□□ -0.23
CHMP4A-206ENST00000533011 COL5A3P25940 1745 aaPredicted RBP13.6□□□□□ -0.23
CHMP4A-206ENST00000533011 AKAP4Q5JQC9 854 aa13.6□□□□□ -0.23
CHMP4A-206ENST00000533011 TIAM2Q8IVF5 1701 aa13.6□□□□□ -0.23
CHMP4A-206ENST00000533011 PDE6BP35913 854 aa13.59□□□□□ -0.23
CHMP4A-206ENST00000533011 RALBP1Q15311 655 aa13.59□□□□□ -0.23
CHMP4A-206ENST00000533011 USPL1Q5W0Q7 1092 aa13.59□□□□□ -0.23
CHMP4A-206ENST00000533011 TAOK3Q9H2K8 898 aa13.59□□□□□ -0.23
CHMP4A-206ENST00000533011 NARFQ9UHQ1 456 aa13.59□□□□□ -0.23
CHMP4A-206ENST00000533011 CCDC88AQ3V6T2 1871 aa13.59□□□□□ -0.23
CHMP4A-206ENST00000533011 PTCD1O75127 700 aaKnown RBP13.58□□□□□ -0.24
CHMP4A-206ENST00000533011 NFIXQ14938 502 aa13.58□□□□□ -0.24
CHMP4A-206ENST00000533011 MTHFSDQ2M296 383 aaKnown RBP13.58□□□□□ -0.24
CHMP4A-206ENST00000533011 INTS5Q6P9B9 1019 aaKnown RBP13.58□□□□□ -0.24
CHMP4A-206ENST00000533011 MYH14Q7Z406 1995 aaKnown RBP13.58□□□□□ -0.24
CHMP4A-206ENST00000533011 PDE4DIPQ5VU43 2346 aa13.57□□□□□ -0.24
CHMP4A-206ENST00000533011 C21orf2O43822 256 aa13.57□□□□□ -0.24
CHMP4A-206ENST00000533011 U2AF1L5P0DN76 240 aaPredicted RBP13.57□□□□□ -0.24
CHMP4A-206ENST00000533011 U2AF1Q01081 240 aaKnown RBP eCLIP13.57□□□□□ -0.24
CHMP4A-206ENST00000533011 CNTROBQ8N137 903 aa13.57□□□□□ -0.24
CHMP4A-206ENST00000533011 CFAP44Q96MT7 982 aa13.57□□□□□ -0.24
CHMP4A-206ENST00000533011 HACL1Q9UJ83 578 aa13.57□□□□□ -0.24
CHMP4A-206ENST00000533011 ABT1Q9ULW3 272 aaKnown RBP13.57□□□□□ -0.24
CHMP4A-206ENST00000533011 CLEC11AQ9Y240 323 aa13.57□□□□□ -0.24
CHMP4A-206ENST00000533011 SCN11AQ9UI33 1791 aa13.57□□□□□ -0.24
CHMP4A-206ENST00000533011 SCN4AP35499 1836 aa13.57□□□□□ -0.24
CHMP4A-206ENST00000533011 DICER1Q9UPY3 1922 aaKnown RBP13.56□□□□□ -0.24
CHMP4A-206ENST00000533011 MAP2K2P36507 400 aa13.56□□□□□ -0.24
CHMP4A-206ENST00000533011 NFATC2IPQ8NCF5 419 aa13.56□□□□□ -0.24
CHMP4A-206ENST00000533011 ZNF622Q969S3 477 aaKnown RBP eCLIP13.56□□□□□ -0.242e-7■■■□□ 18.4
CHMP4A-206ENST00000533011 BRIP1Q9BX63 1249 aa13.56□□□□□ -0.24
CHMP4A-206ENST00000533011 RSPH6AQ9H0K4 717 aa13.56□□□□□ -0.24
CHMP4A-206ENST00000533011 PRKAR2BP31323 418 aa13.55□□□□□ -0.24
CHMP4A-206ENST00000533011 EAPPQ56P03 285 aaPredicted RBP13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms